Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8045L03.3 |
| Conread position: | 1-200 |
| Cow position: | chr9:32847878-32848074 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 2-200 |
| Cow position: | chr9:15006760-15006572 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 47 |
| Conread position: | 2-200 |
| Cow position: | chr9:19382320-19382507 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-200 |
| Cow position: | chr9:39152690-39152499 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 2-200 |
| Cow position: | chr9:48133723-48133912 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 159, 22 |
| Conread position: | 2-200 |
| Cow position: | chr9:52787548-52787354 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 5-200 |
| Cow position: | chr9:34310021-34310213 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 6-198 |
| Cow position: | chr9:14960945-14961128 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 6-200 |
| Cow position: | chr9:43037480-43037662 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 7-198 |
| Cow position: | chr9:56252895-56253078 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 8-188 |
| Cow position: | chr9:41957802-41957975 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 8-198 |
| Cow position: | chr9:39428800-39428619 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 8-199 |
| Cow position: | chr9:47875960-47875776 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 8-200 |
| Cow position: | chr9:9200724-9200542 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 8-200 |
| Cow position: | chr9:12183747-12183932 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 8-200 |
| Cow position: | chr9:34106722-34106905 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 8-200 |
| Cow position: | chr9:34762851-34762669 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 8-200 |
| Cow position: | chr9:41317973-41317784 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 8-200 |
| Cow position: | chr9:47264218-47264035 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 8-204 |
| Cow position: | chr9:37099239-37099045 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 9-200 |
| Cow position: | chr9:42037653-42037835 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 9-200 |
| Cow position: | chr9:54924619-54924805 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 10-200 |
| Cow position: | chr9:16745674-16745859 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 11-198 |
| Cow position: | chr9:12355856-12356037 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 26-200 |
| Cow position: | chr9:5622020-5621851 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 43-200 |
| Cow position: | chr9:11363922-11364074 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 43-200 |
| Cow position: | chr9:27052310-27052154 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 46-200 |
| Cow position: | chr9:9823474-9823323 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 53-198 |
| Cow position: | chr9:32395982-32396124 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 68-200 |
| Cow position: | chr9:41453525-41453656 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.