Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8045L03.3 |
| Conread position: | 2-188 |
| Cow position: | chrX:32743600-32743419 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-189 |
| Cow position: | chrX:157711-157891 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 2-198 |
| Cow position: | chrX:20377037-20376840 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 2-198 |
| Cow position: | chrX:33802941-33803134 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 2-200 |
| Cow position: | chrX:9161642-9161458 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 6-190 |
| Cow position: | chrX:24132092-24132267 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 6-200 |
| Cow position: | chrX:23667184-23666995 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 6-200 |
| Cow position: | chrX:28929900-28929713 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 7-200 |
| Cow position: | chrX:18456463-18456269 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 8-188 |
| Cow position: | chrX:23254148-23254325 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 151, 35 |
| Conread position: | 8-192 |
| Cow position: | chrX:6563580-6563401 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 8-197 |
| Cow position: | chrX:20791759-20791942 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 8-198 |
| Cow position: | chrX:25232649-25232465 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 8-199 |
| Cow position: | chrX:25338244-25338057 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 8-200 |
| Cow position: | chrX:630253-630433 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 8-200 |
| Cow position: | chrX:2147401-2147211 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 8-200 |
| Cow position: | chrX:2764919-2764740 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 78, 29 |
| Conread position: | 8-200 |
| Cow position: | chrX:11675122-11674938 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 8-200 |
| Cow position: | chrX:13245654-13245467 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 8-200 |
| Cow position: | chrX:21816323-21816134 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 8-200 |
| Cow position: | chrX:26493577-26493764 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 8-200 |
| Cow position: | chrX:28111566-28111379 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 8-200 |
| Cow position: | chrX:31340768-31340581 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 49 |
| Conread position: | 8-200 |
| Cow position: | chrX:38999912-38999719 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 136, 42 |
| Conread position: | 8-200 |
| Cow position: | chrX:46146505-46146688 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 9-200 |
| Cow position: | chrX:21566462-21566275 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-200 |
| Cow position: | chrX:1615988-1616171 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 34-200 |
| Cow position: | chrX:38840920-38840763 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 38-200 |
| Cow position: | chrX:10380886-10380723 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 44-200 |
| Cow position: | chrX:10302364-10302211 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 58-200 |
| Cow position: | chrX:281136-281001 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 66-200 |
| Cow position: | chrX:17042698-17042565 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 89-200 |
| Cow position: | chrX:24201169-24201059 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.