Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8046K01.5.5
        

               Conread position:
               1-70
               

               Cow position:
               chr9:43309190-43309259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               70
               

               Alignm identity:
               67
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-183
               

               Cow position:
               chr9:43309938-43310063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               122
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               245-370
               

               Cow position:
               chr9:43313850-43313975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               117
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               356-448
               

               Cow position:
               chr9:43316929-43317021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               446-559
               

               Cow position:
               chr9:43317435-43317548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               558-658
               

               Cow position:
               chr9:43321478-43321578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-806
               

               Cow position:
               chr9:43324129-43324279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               802-1278
               

               Cow position:
               chr9:43326136-43326606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 47
               

               Conread position:
               1306-1500
               

               Cow position:
               chr9:43326603-43326806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.