Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047B13.3 |
| Conread position: | 1-216 |
| Cow position: | chr22:12399188-12398972 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 59, 155 |
| Conread position: | 1-216 |
| Cow position: | chr22:12399440-12399224 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-217 |
| Cow position: | chr22:11640926-11641143 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-217 |
| Cow position: | chr22:12475901-12475684 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-222 |
| Cow position: | chr22:12476321-12476100 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 213 |
| Conread position: | 1-222 |
| Cow position: | chr22:12499694-12499916 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 137 |
| Conread position: | 1-224 |
| Cow position: | chr22:12475565-12475341 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 134 |
| Conread position: | 1-224 |
| Cow position: | chr22:12499358-12499582 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 59, 129 |
| Conread position: | 1-261 |
| Cow position: | chr22:12418875-12418614 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-261 |
| Cow position: | chr22:12418959-12418698 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-262 |
| Cow position: | chr22:11641178-11641440 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 1-266 |
| Cow position: | chr22:11640842-11641108 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 229 |
| Conread position: | 1-266 |
| Cow position: | chr22:11701337-11701603 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-266 |
| Cow position: | chr22:12399272-12399006 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 1-266 |
| Cow position: | chr22:12399356-12399090 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 1-266 |
| Cow position: | chr22:12399608-12399342 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 59, 218 |
| Conread position: | 1-266 |
| Cow position: | chr22:12499610-12499876 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-269 |
| Cow position: | chr22:11640674-11640943 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 128 |
| Conread position: | 1-269 |
| Cow position: | chr22:11641010-11641279 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 135 |
| Conread position: | 1-269 |
| Cow position: | chr22:11641094-11641363 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-269 |
| Cow position: | chr22:11701421-11701690 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 75, 153 |
| Conread position: | 1-269 |
| Cow position: | chr22:12399692-12399423 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-269 |
| Cow position: | chr22:12418707-12418438 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 1-269 |
| Cow position: | chr22:12431084-12430815 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 148 |
| Conread position: | 1-269 |
| Cow position: | chr22:12431756-12431487 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 1-269 |
| Cow position: | chr22:12432260-12431991 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-269 |
| Cow position: | chr22:12475733-12475464 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-269 |
| Cow position: | chr22:12499106-12499375 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-269 |
| Cow position: | chr22:12499526-12499795 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-278 |
| Cow position: | chr22:12498938-12499215 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 268 |
| Conread position: | 2-224 |
| Cow position: | chr22:12385177-12384954 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-262 |
| Cow position: | chr22:12385431-12385168 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 2-262 |
| Cow position: | chr22:12458455-12458194 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 2-269 |
| Cow position: | chr22:12432427-12432159 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-213 |
| Cow position: | chr22:12499024-12499235 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 3-222 |
| Cow position: | chr22:12432174-12431955 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 130 |
| Conread position: | 3-225 |
| Cow position: | chr22:12458286-12458063 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-266 |
| Cow position: | chr22:12476235-12475971 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 8-262 |
| Cow position: | chr22:12432337-12432082 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 211 |
| Conread position: | 77-266 |
| Cow position: | chr22:12399699-12399510 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 133 |
| Conread position: | 484-780 |
| Cow position: | chr22:12485123-12484827 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 495-777 |
| Cow position: | chr22:12537784-12538066 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 509-777 |
| Cow position: | chr22:12443183-12442915 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.