Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C10.3 |
| Conread position: | 51-265 |
| Cow position: | chr15:34223963-34223743 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 5, 179 |
| Conread position: | 54-237 |
| Cow position: | chr15:25907000-25906822 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 98 |
| Conread position: | 54-270 |
| Cow position: | chr15:13395640-13395417 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 54-270 |
| Cow position: | chr15:22553449-22553670 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 98, 43 |
| Conread position: | 55-237 |
| Cow position: | chr15:27063429-27063613 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 132 |
| Conread position: | 56-225 |
| Cow position: | chr15:48326139-48326310 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 58-237 |
| Cow position: | chr15:24994424-24994607 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 60-268 |
| Cow position: | chr15:36422699-36422494 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 169, 164 |
| Conread position: | 61-237 |
| Cow position: | chr15:3695718-3695541 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 61-237 |
| Cow position: | chr15:8354127-8353945 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-237 |
| Cow position: | chr15:36887921-36887743 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 70 |
| Conread position: | 61-251 |
| Cow position: | chr15:24982092-24982290 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 61-254 |
| Cow position: | chr15:38827238-38827428 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 168, 90 |
| Conread position: | 61-255 |
| Cow position: | chr15:50333066-50332861 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 61-264 |
| Cow position: | chr15:30470886-30471102 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-264 |
| Cow position: | chr15:47844007-47844208 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 115 |
| Conread position: | 61-265 |
| Cow position: | chr15:52317141-52316936 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 61-269 |
| Cow position: | chr15:244867-244653 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 154 |
| Conread position: | 61-269 |
| Cow position: | chr15:33643176-33642959 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 61-272 |
| Cow position: | chr15:36353754-36353534 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-285 |
| Cow position: | chr15:9879291-9879526 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 174 |
| Conread position: | 62-237 |
| Cow position: | chr15:26896609-26896795 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 62-254 |
| Cow position: | chr15:49483713-49483513 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 63-251 |
| Cow position: | chr15:36952120-36952309 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 63-255 |
| Cow position: | chr15:28099196-28098997 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 63-266 |
| Cow position: | chr15:12304722-12304514 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 69-273 |
| Cow position: | chr15:22532330-22532122 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 76, 204 |
| Conread position: | 69-276 |
| Cow position: | chr15:23572608-23572824 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 77-270 |
| Cow position: | chr15:26851160-26851351 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 98 |
| Conread position: | 80-256 |
| Cow position: | chr15:19002213-19002398 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 80-269 |
| Cow position: | chr15:26442282-26442085 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 72, 95 |
| Conread position: | 83-280 |
| Cow position: | chr15:33897888-33897693 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 71, 147 |
| Conread position: | 88-278 |
| Cow position: | chr15:8331143-8331335 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 115 |
| Conread position: | 91-265 |
| Cow position: | chr15:27975815-27975997 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 157 |
| Conread position: | 96-255 |
| Cow position: | chr15:840097-840261 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 96-276 |
| Cow position: | chr15:17762960-17762776 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 137 |
| Conread position: | 97-287 |
| Cow position: | chr15:848693-848505 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 131 |
Show alignments to all cow chromosomes.