Cow genome map

Conread name: Ss1.1-Pig4-TMW8047C10.3

Conread position: 4-269
Cow position: chr2:46164551-46164284 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 148, 36

Conread position: 45-276
Cow position: chr2:63568696-63568930 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 30

Conread position: 47-252
Cow position: chr2:15871928-15872130 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 48

Conread position: 54-237
Cow position: chr2:69350568-69350382 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 98, 122

Conread position: 54-255
Cow position: chr2:9063271-9063470 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 175, 39

Conread position: 54-258
Cow position: chr2:31783927-31784135 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 58

Conread position: 54-265
Cow position: chr2:28301202-28301415 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 68

Conread position: 54-265
Cow position: chr2:41248568-41248779 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 100, 115

Conread position: 54-288
Cow position: chr2:58074347-58074109 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 98, 67

Conread position: 55-237
Cow position: chr2:46202260-46202453 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 56-255
Cow position: chr2:37009410-37009610 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 7

Conread position: 56-286
Cow position: chr2:46052500-46052734 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 5

Conread position: 58-247
Cow position: chr2:51099974-51099778 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 59-255
Cow position: chr2:57733436-57733631 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 170, 92

Conread position: 59-258
Cow position: chr2:44065579-44065771 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 22

Conread position: 60-255
Cow position: chr2:13684702-13684894 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 93

Conread position: 61-223
Cow position: chr2:5604529-5604694 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 60

Conread position: 61-237
Cow position: chr2:10439843-10440014 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 61-237
Cow position: chr2:43624530-43624354 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 18

Conread position: 61-237
Cow position: chr2:45542395-45542216 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 115

Conread position: 61-244
Cow position: chr2:71437374-71437184 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 61-249
Cow position: chr2:44168072-44168261 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 34

Conread position: 61-250
Cow position: chr2:21049323-21049136 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 34

Conread position: 61-252
Cow position: chr2:11656896-11657090 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 12

Conread position: 61-252
Cow position: chr2:22371948-22371754 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 133

Conread position: 61-252
Cow position: chr2:46351778-46351582 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 61-252
Cow position: chr2:84480497-84480299 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 61-254
Cow position: chr2:19494218-19494417 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 61-254
Cow position: chr2:20947376-20947571 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 61-255
Cow position: chr2:40257408-40257212 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 119

Conread position: 61-255
Cow position: chr2:45499198-45498999 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 61-256
Cow position: chr2:40703662-40703466 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 90, 149

Conread position: 61-256
Cow position: chr2:46189092-46188892 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 61-257
Cow position: chr2:45596987-45597186 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 93, 36

Conread position: 61-258
Cow position: chr2:46968185-46967992 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 34

Conread position: 61-259
Cow position: chr2:46120636-46120436 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 19

Conread position: 61-262
Cow position: chr2:6160339-6160139 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 168, 91

Conread position: 61-265
Cow position: chr2:82116094-82116300 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 114

Conread position: 61-268
Cow position: chr2:19137886-19137677 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 201

Conread position: 61-269
Cow position: chr2:46161961-46162170 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 91, 115

Conread position: 61-269
Cow position: chr2:62744004-62743789 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 36

Conread position: 61-270
Cow position: chr2:41452237-41452451 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 114

Conread position: 61-270
Cow position: chr2:43591369-43591155 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 57

Conread position: 61-270
Cow position: chr2:60091429-60091217 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 129

Conread position: 61-271
Cow position: chr2:43994939-43995150 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 119

Conread position: 61-271
Cow position: chr2:47879245-47879456 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 117

Conread position: 61-275
Cow position: chr2:7533764-7533557 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 168, 54

Conread position: 61-317
Cow position: chr2:79954-79694 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 111

Conread position: 62-275
Cow position: chr2:42608071-42608288 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 88, 196

Conread position: 63-270
Cow position: chr2:43990778-43990988 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 111

Conread position: 63-271
Cow position: chr2:18997725-18997936 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 89, 121

Conread position: 63-276
Cow position: chr2:13672530-13672741 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 90, 58

Conread position: 64-237
Cow position: chr2:35948672-35948495 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 33

Conread position: 65-273
Cow position: chr2:37891483-37891261 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 69-237
Cow position: chr2:56339019-56338850 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 94

Conread position: 69-268
Cow position: chr2:29394997-29394789 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 69-270
Cow position: chr2:80275281-80275073 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 15

Conread position: 79-270
Cow position: chr2:46262463-46262652 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 125

Conread position: 80-265
Cow position: chr2:39271407-39271230 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 149, 68

Conread position: 81-227
Cow position: chr2:81493575-81493425 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 81-238
Cow position: chr2:13328980-13328820 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 98

Conread position: 81-269
Cow position: chr2:11435310-11435502 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 71, 92

Conread position: 81-274
Cow position: chr2:75227227-75227425 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 114

Conread position: 83-270
Cow position: chr2:19842814-19843001 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 177

Conread position: 85-264
Cow position: chr2:46312468-46312648 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 39

Conread position: 88-249
Cow position: chr2:19164936-19164771 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 102

Conread position: 88-255
Cow position: chr2:39590288-39590459 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 113

Conread position: 96-224
Cow position: chr2:48199395-48199263 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 96-263
Cow position: chr2:45619357-45619184 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 96-270
Cow position: chr2:9476395-9476212 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 124

Conread position: 96-275
Cow position: chr2:58153743-58153927 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 182

Conread position: 97-269
Cow position: chr2:46057969-46057794 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 102-264
Cow position: chr2:73981677-73981840 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 70

Conread position: 104-254
Cow position: chr2:84750756-84750910 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 28

Show alignments to all cow chromosomes.