Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C10.3 |
| Conread position: | 29-255 |
| Cow position: | chr20:27407873-27407649 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 32 |
| Conread position: | 54-263 |
| Cow position: | chr20:38089953-38090172 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 54-269 |
| Cow position: | chr20:7426158-7425933 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 55-237 |
| Cow position: | chr20:3148724-3148909 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 154 |
| Conread position: | 56-279 |
| Cow position: | chr20:14980467-14980238 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 58-251 |
| Cow position: | chr20:7738188-7737992 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 94, 118 |
| Conread position: | 58-265 |
| Cow position: | chr20:18379422-18379634 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 58-269 |
| Cow position: | chr20:26996573-26996794 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 59-260 |
| Cow position: | chr20:12581910-12581704 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 93, 108 |
| Conread position: | 59-262 |
| Cow position: | chr20:25009588-25009381 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 114 |
| Conread position: | 59-269 |
| Cow position: | chr20:26041054-26040838 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 191 |
| Conread position: | 60-266 |
| Cow position: | chr20:20590256-20590047 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 119 |
| Conread position: | 61-219 |
| Cow position: | chr20:32463474-32463317 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 32 |
| Conread position: | 61-252 |
| Cow position: | chr20:19834784-19834588 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 143 |
| Conread position: | 61-256 |
| Cow position: | chr20:12420572-12420372 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 54 |
| Conread position: | 61-257 |
| Cow position: | chr20:24097047-24097246 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 111 |
| Conread position: | 61-262 |
| Cow position: | chr20:24069852-24070055 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 89, 167 |
| Conread position: | 61-263 |
| Cow position: | chr20:5702770-5702976 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 61-271 |
| Cow position: | chr20:14806933-14807143 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 93, 198 |
| Conread position: | 62-265 |
| Cow position: | chr20:23358444-23358238 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 28 |
| Conread position: | 62-271 |
| Cow position: | chr20:10235878-10236077 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 167, 87 |
| Conread position: | 64-256 |
| Cow position: | chr20:3255085-3255280 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 116 |
| Conread position: | 64-262 |
| Cow position: | chr20:398257-398059 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 68-270 |
| Cow position: | chr20:4892066-4891857 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 81-252 |
| Cow position: | chr20:24491962-24491784 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 81-255 |
| Cow position: | chr20:20158202-20158377 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 95 |
| Conread position: | 101-237 |
| Cow position: | chr20:12033535-12033398 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 5 |
| Conread position: | 323-1280 |
| Cow position: | chr20:559679-560616 (view UCSC Genome Browser custom track) |
| Alignm length: | 965 |
| Alignm identity: | 795 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 41 |
Show alignments to all cow chromosomes.