Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C10.3 |
| Conread position: | 54-265 |
| Cow position: | chr22:24903582-24903801 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 54-265 |
| Cow position: | chr22:33985807-33985597 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 58-256 |
| Cow position: | chr22:2109630-2109427 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 120 |
| Conread position: | 58-257 |
| Cow position: | chr22:16094906-16094704 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 58-270 |
| Cow position: | chr22:15568019-15567806 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 171, 94 |
| Conread position: | 58-307 |
| Cow position: | chr22:14141345-14141088 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 225 |
| Conread position: | 59-215 |
| Cow position: | chr22:9171406-9171566 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 59-258 |
| Cow position: | chr22:16813796-16813998 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 59-262 |
| Cow position: | chr22:44717714-44717927 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 59-275 |
| Cow position: | chr22:43398000-43398217 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 158 |
| Conread position: | 59-289 |
| Cow position: | chr22:18838250-18838480 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 60-262 |
| Cow position: | chr22:9735269-9735474 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 92, 10 |
| Conread position: | 60-263 |
| Cow position: | chr22:4060948-4060739 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 60-269 |
| Cow position: | chr22:44741075-44741283 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 107 |
| Conread position: | 60-286 |
| Cow position: | chr22:28370945-28371161 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 169, 28 |
| Conread position: | 61-237 |
| Cow position: | chr22:10532500-10532675 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 168, 91 |
| Conread position: | 61-250 |
| Cow position: | chr22:11189031-11189225 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 61-251 |
| Cow position: | chr22:30818213-30818405 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 118 |
| Conread position: | 61-252 |
| Cow position: | chr22:6176285-6176085 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 61-255 |
| Cow position: | chr22:33948973-33948777 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 61-257 |
| Cow position: | chr22:38439157-38438957 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 170 |
| Conread position: | 61-258 |
| Cow position: | chr22:12157844-12157646 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 89, 111 |
| Conread position: | 61-262 |
| Cow position: | chr22:4163979-4164185 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 21 |
| Conread position: | 61-263 |
| Cow position: | chr22:13957644-13957437 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-263 |
| Cow position: | chr22:21905471-21905678 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 61-265 |
| Cow position: | chr22:2100946-2100739 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 118 |
| Conread position: | 61-265 |
| Cow position: | chr22:34735864-34736058 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 136, 90 |
| Conread position: | 61-266 |
| Cow position: | chr22:17652435-17652645 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 118 |
| Conread position: | 61-269 |
| Cow position: | chr22:4563362-4563571 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 61-270 |
| Cow position: | chr22:26188870-26189085 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 201 |
| Conread position: | 61-273 |
| Cow position: | chr22:6721078-6720863 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 61-273 |
| Cow position: | chr22:10567714-10567501 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 115 |
| Conread position: | 61-273 |
| Cow position: | chr22:22613106-22613319 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 110 |
| Conread position: | 61-289 |
| Cow position: | chr22:41971154-41970926 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 168 |
| Conread position: | 61-291 |
| Cow position: | chr22:6709791-6709551 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 63-279 |
| Cow position: | chr22:24134321-24134100 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 64-315 |
| Cow position: | chr22:7518558-7518818 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 71-264 |
| Cow position: | chr22:33399479-33399281 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 83, 188 |
| Conread position: | 80-251 |
| Cow position: | chr22:24890240-24890416 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 80-255 |
| Cow position: | chr22:26233651-26233833 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 70, 108 |
| Conread position: | 80-255 |
| Cow position: | chr22:42618019-42618195 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 150 |
| Conread position: | 81-237 |
| Cow position: | chr22:10631406-10631570 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 81-266 |
| Cow position: | chr22:1289508-1289319 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 81-323 |
| Cow position: | chr22:11613444-11613698 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 83-265 |
| Cow position: | chr22:27730059-27730250 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 167 |
| Conread position: | 84-266 |
| Cow position: | chr22:15490677-15490868 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 87-265 |
| Cow position: | chr22:10594634-10594822 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 87-267 |
| Cow position: | chr22:30684755-30684938 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 10 |
| Conread position: | 88-258 |
| Cow position: | chr22:1304526-1304352 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 88-270 |
| Cow position: | chr22:2201767-2201948 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 89 |
| Conread position: | 96-251 |
| Cow position: | chr22:17852601-17852442 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 96-264 |
| Cow position: | chr22:13951298-13951471 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 96-270 |
| Cow position: | chr22:15950351-15950174 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 96-272 |
| Cow position: | chr22:36432938-36432758 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 96-276 |
| Cow position: | chr22:12902820-12902635 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 118-264 |
| Cow position: | chr22:29546696-29546846 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.