Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C10.3 |
| Conread position: | 54-268 |
| Cow position: | chr24:18442588-18442381 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 7 |
| Conread position: | 59-237 |
| Cow position: | chr24:27713428-27713249 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 59-269 |
| Cow position: | chr24:3412660-3412873 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 95, 198 |
| Conread position: | 59-270 |
| Cow position: | chr24:37651702-37651918 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 59-286 |
| Cow position: | chr24:37823504-37823733 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 213 |
| Conread position: | 61-237 |
| Cow position: | chr24:29561594-29561418 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 88, 115 |
| Conread position: | 61-237 |
| Cow position: | chr24:31816557-31816736 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 165 |
| Conread position: | 61-247 |
| Cow position: | chr24:25122323-25122507 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 61-249 |
| Cow position: | chr24:5360698-5360884 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 61-253 |
| Cow position: | chr24:27844549-27844356 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 61-255 |
| Cow position: | chr24:29539950-29539749 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 61-257 |
| Cow position: | chr24:21834980-21834781 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 114 |
| Conread position: | 61-266 |
| Cow position: | chr24:28510776-28510981 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 61-269 |
| Cow position: | chr24:11887139-11887344 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 61-269 |
| Cow position: | chr24:24491038-24490835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 61-269 |
| Cow position: | chr24:29985005-29984797 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 161, 90 |
| Conread position: | 61-274 |
| Cow position: | chr24:5141921-5142134 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 91, 111 |
| Conread position: | 61-278 |
| Cow position: | chr24:30235852-30236076 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 61-301 |
| Cow position: | chr24:39523470-39523223 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 191 |
| Conread position: | 61-312 |
| Cow position: | chr24:22133150-22133398 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 115 |
| Conread position: | 61-344 |
| Cow position: | chr24:3165797-3166089 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 91, 227 |
| Conread position: | 69-266 |
| Cow position: | chr24:27940634-27940438 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 80-270 |
| Cow position: | chr24:43028332-43028136 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 181 |
| Conread position: | 81-258 |
| Cow position: | chr24:37974982-37974801 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 95 |
| Conread position: | 81-328 |
| Cow position: | chr24:230282-230533 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 69, 105 |
| Conread position: | 89-238 |
| Cow position: | chr24:41916266-41916419 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 89-255 |
| Cow position: | chr24:42146217-42146385 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 110 |
| Conread position: | 97-270 |
| Cow position: | chr24:22129623-22129450 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 101-270 |
| Cow position: | chr24:6488227-6488399 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 116-299 |
| Cow position: | chr24:28303321-28303142 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 113, 36 |
Show alignments to all cow chromosomes.