Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C10.3 |
| Conread position: | 37-337 |
| Cow position: | chr25:21668227-21668531 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 47-235 |
| Cow position: | chr25:2624783-2624975 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 101, 54 |
| Conread position: | 54-237 |
| Cow position: | chr25:18288774-18288587 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 54-253 |
| Cow position: | chr25:19129849-19130053 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 54-255 |
| Cow position: | chr25:5637391-5637186 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 139 |
| Conread position: | 54-256 |
| Cow position: | chr25:13272563-13272771 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 58-249 |
| Cow position: | chr25:16319142-16318955 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 94, 119 |
| Conread position: | 58-288 |
| Cow position: | chr25:21191487-21191712 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 171, 94 |
| Conread position: | 61-232 |
| Cow position: | chr25:23245001-23244827 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 91, 111 |
| Conread position: | 61-236 |
| Cow position: | chr25:13222901-13223080 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 61-247 |
| Cow position: | chr25:26306203-26306010 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 61-250 |
| Cow position: | chr25:31657276-31657084 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 61-252 |
| Cow position: | chr25:19679356-19679550 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 110 |
| Conread position: | 61-254 |
| Cow position: | chr25:26089812-26089626 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 190, 91 |
| Conread position: | 61-255 |
| Cow position: | chr25:1840325-1840522 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 115 |
| Conread position: | 61-255 |
| Cow position: | chr25:18721119-18720926 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 166, 91 |
| Conread position: | 61-255 |
| Cow position: | chr25:33550510-33550713 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 53, 122 |
| Conread position: | 61-263 |
| Cow position: | chr25:4521836-4521633 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 61-264 |
| Cow position: | chr25:23998923-23998730 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 168, 93 |
| Conread position: | 61-266 |
| Cow position: | chr25:8347653-8347870 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 61-266 |
| Cow position: | chr25:33457733-33457937 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 89, 118 |
| Conread position: | 61-267 |
| Cow position: | chr25:14720745-14720943 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 91 |
| Conread position: | 61-267 |
| Cow position: | chr25:26679227-26679442 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 61-270 |
| Cow position: | chr25:20202914-20203124 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 124 |
| Conread position: | 61-274 |
| Cow position: | chr25:11436806-11436604 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 167, 91 |
| Conread position: | 61-274 |
| Cow position: | chr25:22348462-22348238 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-290 |
| Cow position: | chr25:36873332-36873108 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 180 |
| Conread position: | 62-251 |
| Cow position: | chr25:36746446-36746251 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 62-270 |
| Cow position: | chr25:7750454-7750663 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 92, 114 |
| Conread position: | 69-274 |
| Cow position: | chr25:24669435-24669230 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 80-245 |
| Cow position: | chr25:7673321-7673498 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 80-256 |
| Cow position: | chr25:41150946-41150762 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 80-271 |
| Cow position: | chr25:24115296-24115094 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 81-262 |
| Cow position: | chr25:28668025-28667842 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 69, 147 |
| Conread position: | 81-267 |
| Cow position: | chr25:20523213-20523024 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 71, 144 |
| Conread position: | 81-269 |
| Cow position: | chr25:7684877-7684683 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 71, 35 |
| Conread position: | 81-270 |
| Cow position: | chr25:9025146-9025339 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 81-270 |
| Cow position: | chr25:28597589-28597388 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 86-313 |
| Cow position: | chr25:26072535-26072304 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 88-285 |
| Cow position: | chr25:4157218-4157021 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 160 |
| Conread position: | 90-263 |
| Cow position: | chr25:18934605-18934428 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 62, 168 |
| Conread position: | 96-286 |
| Cow position: | chr25:3346161-3345967 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 83 |
| Conread position: | 96-296 |
| Cow position: | chr25:14210019-14210218 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 112-264 |
| Cow position: | chr25:2414849-2415007 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 116-275 |
| Cow position: | chr25:7441065-7441235 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 125-266 |
| Cow position: | chr25:22752959-22753107 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.