Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C10.3 |
| Conread position: | 25-268 |
| Cow position: | chr29:36530834-36531083 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 54-267 |
| Cow position: | chr29:17804529-17804744 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 54-275 |
| Cow position: | chr29:22613424-22613641 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 55-269 |
| Cow position: | chr29:936205-936420 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 55-280 |
| Cow position: | chr29:22167083-22166863 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 99, 127 |
| Conread position: | 59-271 |
| Cow position: | chr29:39038270-39038050 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 93, 201 |
| Conread position: | 60-256 |
| Cow position: | chr29:36781304-36781107 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 92 |
| Conread position: | 60-257 |
| Cow position: | chr29:19363711-19363911 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 41 |
| Conread position: | 61-222 |
| Cow position: | chr29:22723602-22723767 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-234 |
| Cow position: | chr29:23825209-23825031 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-234 |
| Cow position: | chr29:34358977-34358797 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 168 |
| Conread position: | 61-237 |
| Cow position: | chr29:26540539-26540356 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 61-262 |
| Cow position: | chr29:41112878-41112681 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 61-265 |
| Cow position: | chr29:22028951-22028748 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 61-266 |
| Cow position: | chr29:17109961-17110166 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 61-266 |
| Cow position: | chr29:22729569-22729778 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 91, 23 |
| Conread position: | 61-267 |
| Cow position: | chr29:9378638-9378849 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-269 |
| Cow position: | chr29:35501653-35501449 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 168, 91 |
| Conread position: | 61-270 |
| Cow position: | chr29:5063146-5063362 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 91, 112 |
| Conread position: | 61-270 |
| Cow position: | chr29:12680157-12680376 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-270 |
| Cow position: | chr29:19949311-19949521 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 61-271 |
| Cow position: | chr29:40117573-40117784 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 60 |
| Conread position: | 63-257 |
| Cow position: | chr29:29769348-29769150 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 63-266 |
| Cow position: | chr29:22162246-22162051 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 89 |
| Conread position: | 63-266 |
| Cow position: | chr29:29308568-29308369 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 166, 89 |
| Conread position: | 79-249 |
| Cow position: | chr29:40763675-40763500 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 80-256 |
| Cow position: | chr29:7444041-7443864 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 149 |
| Conread position: | 81-271 |
| Cow position: | chr29:9709716-9709912 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 110 |
| Conread position: | 86-268 |
| Cow position: | chr29:4070650-4070838 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 90-280 |
| Cow position: | chr29:27997220-27997021 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 91-269 |
| Cow position: | chr29:41223196-41223379 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 100-268 |
| Cow position: | chr29:36357166-36357343 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.