Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C10.3 |
| Conread position: | 25-258 |
| Cow position: | chr8:10970814-10971051 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 38-237 |
| Cow position: | chr8:19980089-19979891 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 145 |
| Conread position: | 45-255 |
| Cow position: | chr8:29173207-29173421 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 54-222 |
| Cow position: | chr8:35580628-35580456 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 54-252 |
| Cow position: | chr8:48527959-48527753 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 71, 123 |
| Conread position: | 54-265 |
| Cow position: | chr8:54303031-54303237 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 106 |
| Conread position: | 58-270 |
| Cow position: | chr8:33640376-33640589 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 92, 193 |
| Conread position: | 59-255 |
| Cow position: | chr8:6675209-6675409 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 59-270 |
| Cow position: | chr8:44449592-44449377 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 86, 115 |
| Conread position: | 60-226 |
| Cow position: | chr8:19616329-19616492 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 92, 35 |
| Conread position: | 60-258 |
| Cow position: | chr8:29934054-29934262 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 61-227 |
| Cow position: | chr8:32278334-32278160 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 61-237 |
| Cow position: | chr8:34060148-34059966 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-237 |
| Cow position: | chr8:41219342-41219525 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-249 |
| Cow position: | chr8:42794308-42794105 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-256 |
| Cow position: | chr8:6224420-6224227 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 61-260 |
| Cow position: | chr8:28229460-28229258 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 91, 117 |
| Conread position: | 61-262 |
| Cow position: | chr8:42762417-42762215 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 91, 140 |
| Conread position: | 61-263 |
| Cow position: | chr8:20107777-20107573 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 111 |
| Conread position: | 61-264 |
| Cow position: | chr8:10337024-10336822 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 91, 116 |
| Conread position: | 61-265 |
| Cow position: | chr8:49305735-49305524 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 61-266 |
| Cow position: | chr8:36531591-36531374 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-269 |
| Cow position: | chr8:3914605-3914825 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 205 |
| Conread position: | 61-270 |
| Cow position: | chr8:37635980-37635764 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 61-270 |
| Cow position: | chr8:58058757-58058970 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 61-285 |
| Cow position: | chr8:8190050-8189814 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 225 |
| Conread position: | 61-290 |
| Cow position: | chr8:47169958-47170195 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 223 |
| Conread position: | 61-297 |
| Cow position: | chr8:38572252-38572017 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 61-319 |
| Cow position: | chr8:58393576-58393834 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 151 |
| Conread position: | 63-255 |
| Cow position: | chr8:55884989-55885186 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 63-255 |
| Cow position: | chr8:61848711-61848511 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 76-237 |
| Cow position: | chr8:3793181-3793349 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 80-260 |
| Cow position: | chr8:32133302-32133483 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 92 |
| Conread position: | 81-255 |
| Cow position: | chr8:27955117-27954938 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 81-269 |
| Cow position: | chr8:16938434-16938253 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 148, 71 |
| Conread position: | 88-255 |
| Cow position: | chr8:47707473-47707307 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 90 |
| Conread position: | 88-289 |
| Cow position: | chr8:31902645-31902442 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 91-252 |
| Cow position: | chr8:51501242-51501076 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 96-262 |
| Cow position: | chr8:20080035-20079868 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 133 |
| Conread position: | 97-265 |
| Cow position: | chr8:5730082-5730254 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 80 |
Show alignments to all cow chromosomes.