Cow genome map
Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
Conread position: | 1-202 |
Cow position: | chr11:57153317-57153110 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 154 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 28, 39 |
Conread position: | 1-221 |
Cow position: | chr11:69491764-69491979 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 126, 13 |
Conread position: | 1-233 |
Cow position: | chr11:35284448-35284670 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 181 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 72, 33 |
Conread position: | 1-234 |
Cow position: | chr11:27817169-27816937 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 178 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 73, 22 |
Conread position: | 1-234 |
Cow position: | chr11:77763166-77762939 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 183 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 53, 42 |
Conread position: | 1-237 |
Cow position: | chr11:57753033-57752793 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 184 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 66, 122 |
Conread position: | 1-237 |
Cow position: | chr11:77772344-77772116 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 128, 41 |
Conread position: | 1-242 |
Cow position: | chr11:44064227-44064476 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 188 |
Conread position: | 1-246 |
Cow position: | chr11:64101392-64101645 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 193 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 67, 188 |
Conread position: | 2-158 |
Cow position: | chr11:60511732-60511566 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 123 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 2-158 |
Cow position: | chr11:80269499-80269345 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 126, 72 |
Conread position: | 2-158 |
Cow position: | chr11:84729284-84729445 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 2-166 |
Cow position: | chr11:57062211-57062377 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 133 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 125, 80 |
Conread position: | 2-170 |
Cow position: | chr11:35251639-35251476 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 135 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 2-170 |
Cow position: | chr11:70605727-70605898 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 2-170 |
Cow position: | chr11:77756415-77756237 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 131 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 2-196 |
Cow position: | chr11:11109760-11109559 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 143 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 66, 176 |
Conread position: | 2-198 |
Cow position: | chr11:10877600-10877797 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 79, 180 |
Conread position: | 2-205 |
Cow position: | chr11:77477908-77477722 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 127, 52 |
Conread position: | 2-205 |
Cow position: | chr11:77478582-77478396 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 127, 52 |
Conread position: | 2-232 |
Cow position: | chr11:9144583-9144372 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 173 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 62, 40 |
Conread position: | 2-232 |
Cow position: | chr11:15885646-15885874 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 181 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 75, 29 |
Conread position: | 2-233 |
Cow position: | chr11:24008443-24008675 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 168 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 60, 178 |
Conread position: | 2-234 |
Cow position: | chr11:29785462-29785691 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 185 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 81, 52 |
Conread position: | 2-234 |
Cow position: | chr11:74171263-74171036 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 182 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 82, 24 |
Conread position: | 2-235 |
Cow position: | chr11:19567387-19567612 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 187 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 72, 32 |
Conread position: | 2-235 |
Cow position: | chr11:21909788-21909550 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 67, 29 |
Conread position: | 2-235 |
Cow position: | chr11:55283182-55282931 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 191 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 66, 192 |
Conread position: | 2-237 |
Cow position: | chr11:82529205-82529462 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 196 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 2-238 |
Cow position: | chr11:39830876-39830651 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 179 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 74, 101 |
Conread position: | 2-240 |
Cow position: | chr11:87168425-87168198 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 178 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 196, 41 |
Conread position: | 2-242 |
Cow position: | chr11:25807390-25807146 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 182 |
Conread position: | 2-245 |
Cow position: | chr11:54204476-54204233 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 193 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 127, 11 |
Conread position: | 2-248 |
Cow position: | chr11:8087810-8087562 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 189 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 126, 53 |
Conread position: | 2-248 |
Cow position: | chr11:18452795-18452558 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 171 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 196, 37 |
Conread position: | 2-248 |
Cow position: | chr11:22851387-22851635 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 119 |
Conread position: | 2-253 |
Cow position: | chr11:18153899-18153650 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 200 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 101, 78 |
Conread position: | 3-188 |
Cow position: | chr11:9192791-9192605 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 21, 84 |
Conread position: | 3-192 |
Cow position: | chr11:77713308-77713121 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 143 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 66, 39 |
Conread position: | 3-234 |
Cow position: | chr11:12065058-12065273 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 66, 39 |
Conread position: | 3-236 |
Cow position: | chr11:43855882-43855646 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 65, 8 |
Conread position: | 3-239 |
Cow position: | chr11:1774541-1774297 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 189 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 24, 52 |
Conread position: | 3-248 |
Cow position: | chr11:34303816-34304059 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 123, 92 |
Conread position: | 4-209 |
Cow position: | chr11:58793656-58793449 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 71, 27 |
Conread position: | 4-215 |
Cow position: | chr11:12791124-12791327 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 31, 57 |
Conread position: | 4-249 |
Cow position: | chr11:55119817-55120065 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 179 |
Conread position: | 5-227 |
Cow position: | chr11:18090489-18090715 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 163 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 63, 169 |
Conread position: | 6-188 |
Cow position: | chr11:40574421-40574237 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 146 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 79, 177 |
Conread position: | 7-227 |
Cow position: | chr11:34397830-34398055 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 177 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 85, 178 |
Conread position: | 12-233 |
Cow position: | chr11:5221070-5220855 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 117, 37 |
Conread position: | 14-174 |
Cow position: | chr11:47347002-47347163 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 112, 60 |
Conread position: | 17-227 |
Cow position: | chr11:34265790-34265998 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 156 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 109, 81 |
Conread position: | 17-250 |
Cow position: | chr11:30660648-30660890 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 184 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 52, 173 |
Conread position: | 20-235 |
Cow position: | chr11:65777396-65777185 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 159 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 48, 65 |
Conread position: | 21-194 |
Cow position: | chr11:27610794-27610970 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 64, 137 |
Conread position: | 21-279 |
Cow position: | chr11:38009643-38009388 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 196 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 108, 23 |
Conread position: | 43-233 |
Cow position: | chr11:25972555-25972364 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 145 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 84, 39 |
Conread position: | 55-245 |
Cow position: | chr11:15374182-15374371 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 149 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 19, 51 |
Conread position: | 68-235 |
Cow position: | chr11:53270690-53270528 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 10, 62 |
Conread position: | 68-240 |
Cow position: | chr11:16363982-16363804 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 152 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 16, 119 |
Conread position: | 68-249 |
Cow position: | chr11:3261127-3261307 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 150 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 130, 35 |
Conread position: | 73-220 |
Cow position: | chr11:462688-462838 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 11, 110 |
Conread position: | 74-234 |
Cow position: | chr11:34024961-34025114 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 129 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 124, 55 |
Conread position: | 82-232 |
Cow position: | chr11:22386604-22386766 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 131 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 47, 22 |
Conread position: | 83-249 |
Cow position: | chr11:80780553-80780720 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 139 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 46, 95 |
Conread position: | 87-234 |
Cow position: | chr11:20998570-20998726 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 91-239 |
Cow position: | chr11:53331219-53331370 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 39, 92 |
Show alignments to all cow chromosomes.