Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 2-186 |
| Cow position: | chr12:7025124-7024934 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 74, 178 |
| Conread position: | 2-224 |
| Cow position: | chr12:26310771-26310555 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 187, 52 |
| Conread position: | 2-227 |
| Cow position: | chr12:38223225-38222987 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 191 |
| Conread position: | 2-230 |
| Cow position: | chr12:7936747-7936527 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 122, 67 |
| Conread position: | 2-233 |
| Cow position: | chr12:8767307-8767069 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 122 |
| Conread position: | 2-234 |
| Cow position: | chr12:10161631-10161387 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 49, 189 |
| Conread position: | 2-234 |
| Cow position: | chr12:16961920-16962159 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 2-234 |
| Cow position: | chr12:20227057-20226821 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 2-235 |
| Cow position: | chr12:5896753-5896507 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 83, 52 |
| Conread position: | 2-235 |
| Cow position: | chr12:33350664-33350894 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 2-235 |
| Cow position: | chr12:34475927-34476156 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 2-238 |
| Cow position: | chr12:2837928-2837697 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 2-240 |
| Cow position: | chr12:36975097-36974853 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 127, 81 |
| Conread position: | 2-242 |
| Cow position: | chr12:8467869-8467625 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 2-270 |
| Cow position: | chr12:11306315-11306045 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 3-194 |
| Cow position: | chr12:27423583-27423775 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 3-235 |
| Cow position: | chr12:29759164-29758926 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 86, 183 |
| Conread position: | 3-246 |
| Cow position: | chr12:14236335-14236563 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 195, 11 |
| Conread position: | 4-193 |
| Cow position: | chr12:7086432-7086618 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 122, 65 |
| Conread position: | 4-229 |
| Cow position: | chr12:28214425-28214647 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 6-158 |
| Cow position: | chr12:18443001-18443146 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 6-235 |
| Cow position: | chr12:33277286-33277057 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 9-173 |
| Cow position: | chr12:12763879-12763711 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 18-233 |
| Cow position: | chr12:42854109-42854323 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 20, 132 |
| Conread position: | 33-239 |
| Cow position: | chr12:12709828-12709627 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 165, 26 |
| Conread position: | 38-257 |
| Cow position: | chr12:25916957-25916740 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 42-219 |
| Cow position: | chr12:25514457-25514644 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 66-235 |
| Cow position: | chr12:27111266-27111432 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 68-233 |
| Cow position: | chr12:21066607-21066767 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 78-234 |
| Cow position: | chr12:33875423-33875269 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 120, 41 |
| Conread position: | 82-247 |
| Cow position: | chr12:20792136-20791972 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 85-290 |
| Cow position: | chr12:39710033-39710240 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 97 |
Show alignments to all cow chromosomes.