Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-232 |
| Cow position: | chr14:19735079-19735316 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 1-233 |
| Cow position: | chr14:28007296-28007062 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 1-235 |
| Cow position: | chr14:38000080-37999852 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 2-156 |
| Cow position: | chr14:9500233-9500382 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 2-163 |
| Cow position: | chr14:24738929-24738755 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-177 |
| Cow position: | chr14:15662541-15662721 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 2-208 |
| Cow position: | chr14:44483279-44483474 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 196, 30 |
| Conread position: | 2-232 |
| Cow position: | chr14:20642984-20643195 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 132, 73 |
| Conread position: | 2-232 |
| Cow position: | chr14:25994342-25994572 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 150 |
| Conread position: | 2-233 |
| Cow position: | chr14:25448054-25447844 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 188, 29 |
| Conread position: | 2-234 |
| Cow position: | chr14:16715535-16715300 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 51 |
| Conread position: | 2-234 |
| Cow position: | chr14:38722545-38722317 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 125, 35 |
| Conread position: | 2-234 |
| Cow position: | chr14:47880439-47880674 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 2-235 |
| Cow position: | chr14:40243856-40243614 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 188 |
| Conread position: | 2-236 |
| Cow position: | chr14:41712697-41712474 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 2-241 |
| Cow position: | chr14:35605636-35605878 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 180 |
| Conread position: | 2-242 |
| Cow position: | chr14:32903955-32904194 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 29 |
| Conread position: | 2-242 |
| Cow position: | chr14:36420360-36420597 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 126, 29 |
| Conread position: | 2-242 |
| Cow position: | chr14:37983724-37983966 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 86, 40 |
| Conread position: | 2-242 |
| Cow position: | chr14:44886230-44885985 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 126, 56 |
| Conread position: | 2-246 |
| Cow position: | chr14:22046525-22046288 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 129, 29 |
| Conread position: | 2-251 |
| Cow position: | chr14:17051256-17051003 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 3-235 |
| Cow position: | chr14:15011796-15012034 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 104 |
| Conread position: | 4-148 |
| Cow position: | chr14:27579110-27579250 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 4-242 |
| Cow position: | chr14:30134161-30134408 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 5-206 |
| Cow position: | chr14:17556314-17556107 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 181 |
| Conread position: | 6-135 |
| Cow position: | chr14:46980336-46980466 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 6-233 |
| Cow position: | chr14:44454119-44453893 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 6-235 |
| Cow position: | chr14:3436318-3436102 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 9-248 |
| Cow position: | chr14:35685425-35685665 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 13-273 |
| Cow position: | chr14:34912280-34912543 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 20-280 |
| Cow position: | chr14:10949842-10950102 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 54, 163 |
| Conread position: | 23-235 |
| Cow position: | chr14:3589258-3589463 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 62 |
| Conread position: | 36-247 |
| Cow position: | chr14:17462945-17462733 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 37-170 |
| Cow position: | chr14:44771727-44771589 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 50-250 |
| Cow position: | chr14:38413119-38412920 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 40 |
| Conread position: | 55-233 |
| Cow position: | chr14:45529931-45529752 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 23, 130 |
| Conread position: | 61-234 |
| Cow position: | chr14:44023896-44023717 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 65-216 |
| Cow position: | chr14:13835743-13835889 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 69-240 |
| Cow position: | chr14:29481202-29481377 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 116 |
| Conread position: | 73-237 |
| Cow position: | chr14:5255596-5255432 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 74-233 |
| Cow position: | chr14:44787462-44787302 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 84, 109 |
| Conread position: | 74-235 |
| Cow position: | chr14:31810276-31810115 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 93-250 |
| Cow position: | chr14:28574814-28574656 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 106-231 |
| Cow position: | chr14:21864584-21864702 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 64 |
Show alignments to all cow chromosomes.