Cow genome map

Conread name: Ss1.1-Pig4-TMW8047C15.3

Conread position: 1-233
Cow position: chr15:25683726-25683963 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 184

Conread position: 1-233
Cow position: chr15:30570164-30570406 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 181

Conread position: 1-243
Cow position: chr15:53712866-53713112 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 1-249
Cow position: chr15:28608150-28607889 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 192

Conread position: 2-127
Cow position: chr15:35042410-35042540 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 2-168
Cow position: chr15:12048706-12048540 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 127, 18

Conread position: 2-193
Cow position: chr15:53335379-53335578 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 186

Conread position: 2-202
Cow position: chr15:1888106-1888304 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 18

Conread position: 2-229
Cow position: chr15:13081342-13081582 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 52

Conread position: 2-230
Cow position: chr15:50243323-50243546 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 125, 52

Conread position: 2-231
Cow position: chr15:18403959-18404180 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 29

Conread position: 2-233
Cow position: chr15:49279439-49279199 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 105

Conread position: 2-233
Cow position: chr15:52131871-52132105 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 80, 13

Conread position: 2-234
Cow position: chr15:9437533-9437762 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 167, 67

Conread position: 2-234
Cow position: chr15:26866881-26867095 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 190, 29

Conread position: 2-235
Cow position: chr15:8630370-8630600 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 74, 36

Conread position: 2-235
Cow position: chr15:39809535-39809773 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 76, 40

Conread position: 2-236
Cow position: chr15:16669396-16669156 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 36

Conread position: 2-236
Cow position: chr15:40065921-40066157 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 32

Conread position: 2-239
Cow position: chr15:21182025-21182264 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 116

Conread position: 2-239
Cow position: chr15:52868852-52869090 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 78, 24

Conread position: 2-241
Cow position: chr15:44797236-44796993 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 186
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 72, 161

Conread position: 2-246
Cow position: chr15:11287358-11287107 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 185

Conread position: 2-247
Cow position: chr15:5912358-5912105 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 186

Conread position: 2-251
Cow position: chr15:9427995-9427734 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 202

Conread position: 3-127
Cow position: chr15:36582525-36582402 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 89

Conread position: 3-208
Cow position: chr15:12283203-12283405 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 126, 51

Conread position: 3-221
Cow position: chr15:14810896-14810685 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 129

Conread position: 3-235
Cow position: chr15:16972108-16971880 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 75, 28

Conread position: 3-235
Cow position: chr15:31935565-31935799 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 23

Conread position: 3-240
Cow position: chr15:6523414-6523172 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 65, 28

Conread position: 3-243
Cow position: chr15:21802577-21802815 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 126, 70

Conread position: 4-167
Cow position: chr15:1892154-1891988 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 76, 7

Conread position: 4-233
Cow position: chr15:17642234-17642459 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 27

Conread position: 5-221
Cow position: chr15:2437146-2437353 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 37

Conread position: 7-248
Cow position: chr15:579093-579326 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 67

Conread position: 8-235
Cow position: chr15:37633398-37633632 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 67, 179

Conread position: 12-232
Cow position: chr15:49271975-49272195 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 109, 70

Conread position: 13-234
Cow position: chr15:582879-583110 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 177

Conread position: 19-242
Cow position: chr15:23265824-23266048 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 57, 11

Conread position: 37-233
Cow position: chr15:16989556-16989757 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 37, 122

Conread position: 37-251
Cow position: chr15:7443868-7443644 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 153

Conread position: 50-236
Cow position: chr15:4622692-4622508 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 60

Conread position: 66-196
Cow position: chr15:11997852-11997984 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 108

Conread position: 68-234
Cow position: chr15:41807444-41807275 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 100

Conread position: 73-233
Cow position: chr15:36278090-36277930 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 109

Conread position: 75-235
Cow position: chr15:35067037-35067199 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 107

Conread position: 79-237
Cow position: chr15:37491620-37491466 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 68

Conread position: 84-242
Cow position: chr15:1992771-1992932 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 99

Conread position: 133-240
Cow position: chr15:12615618-12615726 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 46

Show alignments to all cow chromosomes.