Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-244 |
| Cow position: | chr19:6478468-6478216 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 70, 185 |
| Conread position: | 2-194 |
| Cow position: | chr19:30188436-30188236 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 72, 179 |
| Conread position: | 2-196 |
| Cow position: | chr19:35026819-35026623 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 67, 132 |
| Conread position: | 2-234 |
| Cow position: | chr19:30349876-30349649 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 2-235 |
| Cow position: | chr19:25846667-25846893 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 90, 13 |
| Conread position: | 2-235 |
| Cow position: | chr19:30051654-30051423 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 79, 40 |
| Conread position: | 2-235 |
| Cow position: | chr19:55418409-55418633 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 196, 34 |
| Conread position: | 2-242 |
| Cow position: | chr19:33590063-33590316 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 191 |
| Conread position: | 2-244 |
| Cow position: | chr19:6362634-6362882 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 185 |
| Conread position: | 2-247 |
| Cow position: | chr19:4600860-4601104 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 107, 52 |
| Conread position: | 2-248 |
| Cow position: | chr19:47772374-47772620 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 102 |
| Conread position: | 2-268 |
| Cow position: | chr19:41504319-41504590 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 182 |
| Conread position: | 3-155 |
| Cow position: | chr19:51070529-51070374 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 3-170 |
| Cow position: | chr19:22670508-22670336 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 3-172 |
| Cow position: | chr19:19242427-19242605 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 3-207 |
| Cow position: | chr19:13448514-13448724 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 85, 183 |
| Conread position: | 3-239 |
| Cow position: | chr19:55898389-55898627 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 5 |
| Conread position: | 3-257 |
| Cow position: | chr19:28606002-28605743 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 83, 175 |
| Conread position: | 6-235 |
| Cow position: | chr19:4548299-4548065 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 10-234 |
| Cow position: | chr19:30880175-30880404 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 19-231 |
| Cow position: | chr19:30385134-30385353 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 10, 167 |
| Conread position: | 20-235 |
| Cow position: | chr19:30451663-30451462 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 20-274 |
| Cow position: | chr19:28560451-28560184 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 176 |
| Conread position: | 22-246 |
| Cow position: | chr19:425927-425708 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 107 |
| Conread position: | 33-233 |
| Cow position: | chr19:14534097-14533893 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 36-235 |
| Cow position: | chr19:36388552-36388353 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 55-246 |
| Cow position: | chr19:35826802-35827001 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 131 |
| Conread position: | 65-234 |
| Cow position: | chr19:12478135-12477960 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 18, 119 |
| Conread position: | 74-235 |
| Cow position: | chr19:39299467-39299310 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 84 |
| Conread position: | 74-248 |
| Cow position: | chr19:41554685-41554856 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 81-242 |
| Cow position: | chr19:3082532-3082695 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 96-234 |
| Cow position: | chr19:33955206-33955347 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 114-244 |
| Cow position: | chr19:37601694-37601563 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 67 |
Show alignments to all cow chromosomes.