Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-214 |
| Cow position: | chr20:31098115-31098331 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 152 |
| Conread position: | 2-144 |
| Cow position: | chr20:9918883-9919027 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 123, 80 |
| Conread position: | 2-163 |
| Cow position: | chr20:24280374-24280533 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 2-170 |
| Cow position: | chr20:27844426-27844609 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 2-194 |
| Cow position: | chr20:7284266-7284456 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 2-223 |
| Cow position: | chr20:3376900-3376674 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 2-224 |
| Cow position: | chr20:2858753-2858971 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 127, 80 |
| Conread position: | 2-233 |
| Cow position: | chr20:22420391-22420161 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 2-233 |
| Cow position: | chr20:31563571-31563338 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 2-234 |
| Cow position: | chr20:22919745-22919517 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 2-234 |
| Cow position: | chr20:36988186-36987951 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 2-235 |
| Cow position: | chr20:14864459-14864226 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 2-235 |
| Cow position: | chr20:23421952-23421721 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 173 |
| Conread position: | 2-238 |
| Cow position: | chr20:13588748-13588508 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 66, 152 |
| Conread position: | 2-252 |
| Cow position: | chr20:23400692-23400934 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 2-255 |
| Cow position: | chr20:15147583-15147330 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 78, 7 |
| Conread position: | 2-266 |
| Cow position: | chr20:5668373-5668102 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 108 |
| Conread position: | 3-195 |
| Cow position: | chr20:20072141-20071943 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 171 |
| Conread position: | 3-232 |
| Cow position: | chr20:30285775-30286003 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 4-196 |
| Cow position: | chr20:13790410-13790600 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 8-233 |
| Cow position: | chr20:21002123-21001910 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 9-232 |
| Cow position: | chr20:20064240-20064012 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 20-236 |
| Cow position: | chr20:887352-887571 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 67, 141 |
| Conread position: | 20-269 |
| Cow position: | chr20:30243644-30243883 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 26-230 |
| Cow position: | chr20:21301036-21300828 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 36-235 |
| Cow position: | chr20:16582844-16582644 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 38, 147 |
| Conread position: | 39-234 |
| Cow position: | chr20:33154540-33154338 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 32, 149 |
| Conread position: | 43-226 |
| Cow position: | chr20:17473144-17472958 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 65-248 |
| Cow position: | chr20:20350323-20350138 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 69-249 |
| Cow position: | chr20:12118537-12118351 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 117 |
| Conread position: | 91-233 |
| Cow position: | chr20:4851792-4851935 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 92-247 |
| Cow position: | chr20:15492284-15492443 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 80 |
Show alignments to all cow chromosomes.