Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-232 |
| Cow position: | chr21:38021322-38021550 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 2-150 |
| Cow position: | chr21:16679210-16679363 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 2-232 |
| Cow position: | chr21:6667627-6667849 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 2-234 |
| Cow position: | chr21:39075055-39074823 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 117 |
| Conread position: | 2-235 |
| Cow position: | chr21:15543524-15543294 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 81, 182 |
| Conread position: | 2-235 |
| Cow position: | chr21:17671954-17671723 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 2-235 |
| Cow position: | chr21:30567539-30567310 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 2-237 |
| Cow position: | chr21:37282946-37283177 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 2-241 |
| Cow position: | chr21:45962825-45963067 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 2-242 |
| Cow position: | chr21:22941801-22942044 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 2-248 |
| Cow position: | chr21:23286218-23285971 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 2-248 |
| Cow position: | chr21:42396408-42396657 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 180 |
| Conread position: | 3-242 |
| Cow position: | chr21:45448013-45448251 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 127, 79 |
| Conread position: | 5-246 |
| Cow position: | chr21:12079642-12079886 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 69, 33 |
| Conread position: | 6-177 |
| Cow position: | chr21:12756365-12756541 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 11-182 |
| Cow position: | chr21:23399403-23399577 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 15-236 |
| Cow position: | chr21:26742075-26741863 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 122, 39 |
| Conread position: | 20-235 |
| Cow position: | chr21:6282370-6282581 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 178, 53 |
| Conread position: | 38-239 |
| Cow position: | chr21:26632005-26631797 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 38-248 |
| Cow position: | chr21:27678472-27678687 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 36, 148 |
| Conread position: | 60-248 |
| Cow position: | chr21:28650824-28651019 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 16, 120 |
| Conread position: | 69-246 |
| Cow position: | chr21:37170257-37170436 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 75-231 |
| Cow position: | chr21:39527384-39527540 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 89 |
| Conread position: | 87-227 |
| Cow position: | chr21:24972116-24971974 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 96-235 |
| Cow position: | chr21:25019518-25019659 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 99-262 |
| Cow position: | chr21:1506979-1507143 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 102-248 |
| Cow position: | chr21:5597874-5598016 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 105-282 |
| Cow position: | chr21:5588903-5588724 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 107-234 |
| Cow position: | chr21:29943436-29943565 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 73 |
Show alignments to all cow chromosomes.