Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-234 |
| Cow position: | chr22:4932243-4932483 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 156 |
| Conread position: | 1-243 |
| Cow position: | chr22:32018271-32018023 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 66, 185 |
| Conread position: | 2-174 |
| Cow position: | chr22:45497064-45497247 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 180 |
| Conread position: | 2-200 |
| Cow position: | chr22:26787382-26787178 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 2-209 |
| Cow position: | chr22:12627924-12627713 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 181 |
| Conread position: | 2-225 |
| Cow position: | chr22:22010640-22010416 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 2-233 |
| Cow position: | chr22:7281577-7281812 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 2-233 |
| Cow position: | chr22:34087174-34086934 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 2-234 |
| Cow position: | chr22:44037535-44037763 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 2-235 |
| Cow position: | chr22:12537235-12536994 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 2-235 |
| Cow position: | chr22:13083384-13083604 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 106, 52 |
| Conread position: | 2-237 |
| Cow position: | chr22:29064693-29064924 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 2-242 |
| Cow position: | chr22:41321659-41321900 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 53 |
| Conread position: | 2-247 |
| Cow position: | chr22:44637931-44638189 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 67, 122 |
| Conread position: | 2-248 |
| Cow position: | chr22:18324593-18324343 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 120 |
| Conread position: | 2-249 |
| Cow position: | chr22:14730202-14729948 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 3-244 |
| Cow position: | chr22:4058141-4058386 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 182 |
| Conread position: | 4-235 |
| Cow position: | chr22:15873661-15873881 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 127, 38 |
| Conread position: | 5-165 |
| Cow position: | chr22:23681081-23681249 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 131 |
| Conread position: | 6-220 |
| Cow position: | chr22:32355684-32355475 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 8 |
| Conread position: | 6-235 |
| Cow position: | chr22:44687298-44687539 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 58, 186 |
| Conread position: | 13-233 |
| Cow position: | chr22:24435992-24435767 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 14-233 |
| Cow position: | chr22:29004935-29004710 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 172 |
| Conread position: | 15-234 |
| Cow position: | chr22:11749190-11748984 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 184, 7 |
| Conread position: | 15-235 |
| Cow position: | chr22:42421384-42421167 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 43-240 |
| Cow position: | chr22:24257367-24257165 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 11 |
| Conread position: | 74-237 |
| Cow position: | chr22:40860829-40860987 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 88-208 |
| Cow position: | chr22:5714877-5714755 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 90-233 |
| Cow position: | chr22:45788043-45787899 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 12 |
| Conread position: | 141-248 |
| Cow position: | chr22:35331013-35331119 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 30 |
Show alignments to all cow chromosomes.