Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-238 |
| Cow position: | chr25:13704371-13704612 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 1-248 |
| Cow position: | chr25:8618058-8617812 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 68, 127 |
| Conread position: | 1-248 |
| Cow position: | chr25:14279800-14280042 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 2-165 |
| Cow position: | chr25:36235461-36235297 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 2-221 |
| Cow position: | chr25:16940500-16940272 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 187 |
| Conread position: | 2-231 |
| Cow position: | chr25:13123579-13123807 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 180 |
| Conread position: | 2-232 |
| Cow position: | chr25:33346001-33346221 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 2-233 |
| Cow position: | chr25:10010191-10009967 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 2-235 |
| Cow position: | chr25:40833074-40832837 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 185 |
| Conread position: | 2-237 |
| Cow position: | chr25:23014521-23014746 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 2-242 |
| Cow position: | chr25:19686390-19686147 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 2-247 |
| Cow position: | chr25:17473023-17473265 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 2-273 |
| Cow position: | chr25:5377279-5377013 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 3-159 |
| Cow position: | chr25:30036108-30036273 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 3-224 |
| Cow position: | chr25:20180834-20181052 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 195, 118 |
| Conread position: | 5-232 |
| Cow position: | chr25:13216140-13216365 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 12-232 |
| Cow position: | chr25:13486697-13486916 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 14-225 |
| Cow position: | chr25:20624173-20624389 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 56, 79 |
| Conread position: | 20-235 |
| Cow position: | chr25:16687733-16687515 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 23-228 |
| Cow position: | chr25:9785670-9785457 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 31 |
| Conread position: | 32-235 |
| Cow position: | chr25:16240237-16240025 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 41, 159 |
| Conread position: | 32-237 |
| Cow position: | chr25:15564576-15564780 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 55-248 |
| Cow position: | chr25:20423282-20423481 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 61-210 |
| Cow position: | chr25:18205896-18205745 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 98-235 |
| Cow position: | chr25:18666029-18666160 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.