Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-235 |
| Cow position: | chr27:7860168-7860407 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 74, 167 |
| Conread position: | 2-177 |
| Cow position: | chr27:12547772-12547954 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 2-231 |
| Cow position: | chr27:9261415-9261178 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 2-234 |
| Cow position: | chr27:3935107-3935351 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 77, 60 |
| Conread position: | 2-235 |
| Cow position: | chr27:2246583-2246360 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 129, 48 |
| Conread position: | 2-235 |
| Cow position: | chr27:4449728-4449952 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 3-138 |
| Cow position: | chr27:6534467-6534601 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 3-234 |
| Cow position: | chr27:18179082-18179317 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 181 |
| Conread position: | 3-235 |
| Cow position: | chr27:11021353-11021126 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 3-248 |
| Cow position: | chr27:15211355-15211093 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 4-233 |
| Cow position: | chr27:18057094-18056862 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 8-235 |
| Cow position: | chr27:4921868-4922098 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 9-221 |
| Cow position: | chr27:5531311-5531513 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 12-233 |
| Cow position: | chr27:31524120-31523898 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 64, 173 |
| Conread position: | 13-238 |
| Cow position: | chr27:18573478-18573249 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 15-234 |
| Cow position: | chr27:18546497-18546286 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 36-233 |
| Cow position: | chr27:30889330-30889529 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 38-233 |
| Cow position: | chr27:31238423-31238624 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 43-235 |
| Cow position: | chr27:13861028-13861213 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 55-232 |
| Cow position: | chr27:12000124-12000307 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 131 |
| Conread position: | 70-242 |
| Cow position: | chr27:1540738-1540904 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 75-242 |
| Cow position: | chr27:23966307-23966137 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 52, 110 |
| Conread position: | 92-238 |
| Cow position: | chr27:7183806-7183955 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 127-244 |
| Cow position: | chr27:18780182-18780066 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 52 |
Show alignments to all cow chromosomes.