Cow genome map

Conread name: Ss1.1-Pig4-TMW8047C15.3

Conread position: 1-231
Cow position: chr3:74724108-74723871 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 1-234
Cow position: chr3:1549644-1549881 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 150

Conread position: 1-235
Cow position: chr3:12311407-12311649 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 67, 119

Conread position: 1-235
Cow position: chr3:64081799-64082026 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 79, 43

Conread position: 1-241
Cow position: chr3:60854511-60854266 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 153

Conread position: 2-159
Cow position: chr3:56164099-56164261 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 94

Conread position: 2-164
Cow position: chr3:32513778-32513616 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 126, 67

Conread position: 2-171
Cow position: chr3:47497852-47498024 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 104

Conread position: 2-177
Cow position: chr3:6798661-6798485 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 125, 80

Conread position: 2-221
Cow position: chr3:13526962-13527178 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 125, 73

Conread position: 2-223
Cow position: chr3:79315515-79315734 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 170

Conread position: 2-227
Cow position: chr3:27633676-27633441 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 188

Conread position: 2-227
Cow position: chr3:34165316-34165090 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 109

Conread position: 2-229
Cow position: chr3:15091214-15091431 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 24

Conread position: 2-230
Cow position: chr3:21332475-21332254 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 34

Conread position: 2-232
Cow position: chr3:26581741-26581502 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 52

Conread position: 2-232
Cow position: chr3:68127432-68127655 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 126, 29

Conread position: 2-233
Cow position: chr3:23478565-23478800 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 34

Conread position: 2-234
Cow position: chr3:24532152-24532392 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 67, 183

Conread position: 2-234
Cow position: chr3:50499909-50500129 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 196, 120

Conread position: 2-234
Cow position: chr3:58348810-58349034 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 67

Conread position: 2-234
Cow position: chr3:77589728-77589954 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 128, 34

Conread position: 2-235
Cow position: chr3:12531785-12531546 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 81, 183

Conread position: 2-235
Cow position: chr3:54329013-54328789 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 56

Conread position: 2-235
Cow position: chr3:56042386-56042157 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 82, 46

Conread position: 2-235
Cow position: chr3:60947858-60947626 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 34

Conread position: 2-235
Cow position: chr3:73154294-73154519 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 84, 23

Conread position: 2-236
Cow position: chr3:63334374-63334139 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 32

Conread position: 2-239
Cow position: chr3:31528173-31528399 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 65, 21

Conread position: 2-242
Cow position: chr3:5084794-5084566 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 32

Conread position: 2-245
Cow position: chr3:43004471-43004220 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 56

Conread position: 2-246
Cow position: chr3:22054289-22054055 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 127, 32

Conread position: 2-246
Cow position: chr3:23274634-23274388 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 48, 57

Conread position: 2-248
Cow position: chr3:2285023-2285269 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 67, 33

Conread position: 2-248
Cow position: chr3:3690362-3690130 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 40

Conread position: 2-248
Cow position: chr3:17519456-17519213 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 29

Conread position: 2-248
Cow position: chr3:45641841-45642078 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 86, 39

Conread position: 2-251
Cow position: chr3:78442554-78442297 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 184

Conread position: 2-276
Cow position: chr3:8753799-8754067 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 126, 38

Conread position: 3-220
Cow position: chr3:43967077-43966865 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 76, 100

Conread position: 3-233
Cow position: chr3:39385765-39385541 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 65

Conread position: 3-237
Cow position: chr3:32773528-32773766 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 184

Conread position: 3-243
Cow position: chr3:77468290-77468539 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 66, 33

Conread position: 4-247
Cow position: chr3:52657833-52658073 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 6

Conread position: 5-235
Cow position: chr3:1339241-1339474 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 177

Conread position: 5-235
Cow position: chr3:62812640-62812413 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 38

Conread position: 6-231
Cow position: chr3:52817339-52817569 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 79, 60

Conread position: 6-233
Cow position: chr3:27347025-27346794 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 32, 105

Conread position: 6-271
Cow position: chr3:36515009-36514756 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 192, 30

Conread position: 11-225
Cow position: chr3:82543857-82544067 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 116, 71

Conread position: 17-242
Cow position: chr3:31286552-31286327 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 25

Conread position: 20-168
Cow position: chr3:27879577-27879423 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 38-215
Cow position: chr3:69148172-69147991 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 11

Conread position: 38-247
Cow position: chr3:45735545-45735760 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 10, 145

Conread position: 60-230
Cow position: chr3:74436303-74436475 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 122

Conread position: 60-240
Cow position: chr3:41860972-41860786 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 155
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 125

Conread position: 64-235
Cow position: chr3:18851784-18851949 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 18

Conread position: 68-232
Cow position: chr3:5317363-5317192 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 16, 118

Conread position: 74-235
Cow position: chr3:36538493-36538320 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 118

Conread position: 74-248
Cow position: chr3:49414339-49414167 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 124, 9

Conread position: 76-221
Cow position: chr3:83393120-83392973 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 13

Show alignments to all cow chromosomes.