Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 2-172 |
| Cow position: | chr7:13823194-13823362 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 2-175 |
| Cow position: | chr7:6532954-6532783 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 170, 80 |
| Conread position: | 2-188 |
| Cow position: | chr7:30027539-30027731 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 2-194 |
| Cow position: | chr7:14435424-14435232 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 2-195 |
| Cow position: | chr7:42222019-42221826 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 2-197 |
| Cow position: | chr7:5701322-5701523 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 40 |
| Conread position: | 2-210 |
| Cow position: | chr7:45064015-45063806 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 11 |
| Conread position: | 2-221 |
| Cow position: | chr7:59844859-59845076 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 2-228 |
| Cow position: | chr7:20104611-20104377 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 72, 186 |
| Conread position: | 2-232 |
| Cow position: | chr7:56664468-56664686 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 67, 34 |
| Conread position: | 2-233 |
| Cow position: | chr7:46216447-46216683 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 175 |
| Conread position: | 2-233 |
| Cow position: | chr7:62048816-62049045 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 2-234 |
| Cow position: | chr7:62516409-62516642 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 2-235 |
| Cow position: | chr7:40622584-40622813 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 2-237 |
| Cow position: | chr7:29377746-29377516 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 2-238 |
| Cow position: | chr7:67499101-67499333 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 2-242 |
| Cow position: | chr7:59204672-59204928 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 194 |
| Conread position: | 2-256 |
| Cow position: | chr7:61425974-61426233 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 182 |
| Conread position: | 3-226 |
| Cow position: | chr7:24883605-24883386 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 3-236 |
| Cow position: | chr7:52131526-52131766 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 110 |
| Conread position: | 5-187 |
| Cow position: | chr7:39512195-39512025 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 6-227 |
| Cow position: | chr7:63547372-63547165 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 123, 30 |
| Conread position: | 6-248 |
| Cow position: | chr7:20288854-20288613 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 9-247 |
| Cow position: | chr7:32589214-32589461 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 15-234 |
| Cow position: | chr7:11592811-11592596 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 37-234 |
| Cow position: | chr7:43004819-43005021 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 41-234 |
| Cow position: | chr7:43257632-43257829 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 42-265 |
| Cow position: | chr7:48335052-48334836 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 44-232 |
| Cow position: | chr7:28010251-28010056 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 55-251 |
| Cow position: | chr7:185336-185536 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 129 |
| Conread position: | 61-234 |
| Cow position: | chr7:27765717-27765886 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 65-232 |
| Cow position: | chr7:8893584-8893412 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 9, 121 |
| Conread position: | 74-246 |
| Cow position: | chr7:59164786-59164954 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 86-230 |
| Cow position: | chr7:48014709-48014850 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 88-233 |
| Cow position: | chr7:65519625-65519478 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 94-235 |
| Cow position: | chr7:50034613-50034473 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 104, 85 |
| Conread position: | 107-206 |
| Cow position: | chr7:11188807-11188907 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 132-253 |
| Cow position: | chr7:37259651-37259533 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 66, 47 |
Show alignments to all cow chromosomes.