Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
| Conread position: | 1-239 |
| Cow position: | chr8:40273273-40273034 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 68, 187 |
| Conread position: | 2-174 |
| Cow position: | chr8:42151629-42151461 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 2-191 |
| Cow position: | chr8:19369136-19368954 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 133, 67 |
| Conread position: | 2-193 |
| Cow position: | chr8:53891901-53892095 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 2-194 |
| Cow position: | chr8:23440736-23440547 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 127, 40 |
| Conread position: | 2-196 |
| Cow position: | chr8:4336690-4336494 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 66, 170 |
| Conread position: | 2-207 |
| Cow position: | chr8:48682126-48681912 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 2-209 |
| Cow position: | chr8:53359590-53359376 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 2-221 |
| Cow position: | chr8:18883194-18883419 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 2-228 |
| Cow position: | chr8:22102823-22102590 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 74, 185 |
| Conread position: | 2-230 |
| Cow position: | chr8:33818863-33818638 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 2-233 |
| Cow position: | chr8:6507905-6507670 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 67, 40 |
| Conread position: | 2-233 |
| Cow position: | chr8:10167207-10167429 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 127, 29 |
| Conread position: | 2-233 |
| Cow position: | chr8:28387409-28387185 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 2-234 |
| Cow position: | chr8:11794559-11794782 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 125, 73 |
| Conread position: | 2-234 |
| Cow position: | chr8:18801607-18801837 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 125, 147 |
| Conread position: | 2-235 |
| Cow position: | chr8:6763911-6763678 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 2-235 |
| Cow position: | chr8:31888012-31888235 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 2-237 |
| Cow position: | chr8:5874517-5874761 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 2-237 |
| Cow position: | chr8:51877584-51877345 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 2-242 |
| Cow position: | chr8:19772847-19773083 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 2-247 |
| Cow position: | chr8:49406349-49406117 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 2-251 |
| Cow position: | chr8:40432497-40432246 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 2-255 |
| Cow position: | chr8:30021557-30021306 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 180 |
| Conread position: | 3-179 |
| Cow position: | chr8:37193345-37193521 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 3-234 |
| Cow position: | chr8:2975038-2975273 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 156 |
| Conread position: | 3-235 |
| Cow position: | chr8:28049159-28048943 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 195, 39 |
| Conread position: | 4-250 |
| Cow position: | chr8:14617523-14617275 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 5-250 |
| Cow position: | chr8:26041009-26040777 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 8-234 |
| Cow position: | chr8:9672253-9672485 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 133 |
| Conread position: | 8-235 |
| Cow position: | chr8:45686085-45685869 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 191, 57 |
| Conread position: | 11-228 |
| Cow position: | chr8:33438169-33438395 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 11-233 |
| Cow position: | chr8:54159116-54159344 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 11-240 |
| Cow position: | chr8:19305427-19305650 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 61 |
| Conread position: | 14-234 |
| Cow position: | chr8:8480270-8480043 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 15-235 |
| Cow position: | chr8:7104034-7103809 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 13, 162 |
| Conread position: | 20-235 |
| Cow position: | chr8:31185622-31185840 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 20-238 |
| Cow position: | chr8:20341302-20341080 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 136, 64 |
| Conread position: | 23-234 |
| Cow position: | chr8:32720318-32720514 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 175, 19 |
| Conread position: | 25-248 |
| Cow position: | chr8:5803569-5803801 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 138 |
| Conread position: | 29-251 |
| Cow position: | chr8:32960202-32959983 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 33-235 |
| Cow position: | chr8:9986183-9986398 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 37-197 |
| Cow position: | chr8:7102487-7102652 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 149 |
| Conread position: | 38-232 |
| Cow position: | chr8:18725607-18725810 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 151 |
| Conread position: | 55-235 |
| Cow position: | chr8:14703136-14702957 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 107-246 |
| Cow position: | chr8:7125588-7125444 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 122-225 |
| Cow position: | chr8:32789793-32789691 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 57 |
Show alignments to all cow chromosomes.