Cow genome map
Conread name: | Ss1.1-Pig4-TMW8047C15.3 |
Conread position: | 1-231 |
Cow position: | chrX:23253822-23253594 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 181 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 71, 30 |
Conread position: | 1-249 |
Cow position: | chrX:11675460-11675718 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 199 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 91, 183 |
Conread position: | 2-125 |
Cow position: | chrX:24951979-24951855 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 78, 52 |
Conread position: | 2-168 |
Cow position: | chrX:2700718-2700547 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 49, 166 |
Conread position: | 2-207 |
Cow position: | chrX:956875-957086 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 163 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 73, 29 |
Conread position: | 2-207 |
Cow position: | chrX:21885719-21885501 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 170 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 2-219 |
Cow position: | chrX:37956951-37957174 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 75, 27 |
Conread position: | 2-229 |
Cow position: | chrX:37749040-37749277 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 178 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 67, 186 |
Conread position: | 2-233 |
Cow position: | chrX:18699968-18699735 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 178 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 54, 88 |
Conread position: | 2-234 |
Cow position: | chrX:1330406-1330173 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 76, 29 |
Conread position: | 2-234 |
Cow position: | chrX:37980778-37981008 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 181 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 71, 40 |
Conread position: | 2-235 |
Cow position: | chrX:5956944-5956713 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 184 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 126, 80 |
Conread position: | 2-235 |
Cow position: | chrX:9910362-9910132 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 40 |
Conread position: | 2-235 |
Cow position: | chrX:40353698-40353934 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 183 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 67, 34 |
Conread position: | 2-237 |
Cow position: | chrX:4601252-4601026 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 170 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 82, 22 |
Conread position: | 2-237 |
Cow position: | chrX:19017853-19017609 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 188 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 75, 190 |
Conread position: | 2-237 |
Cow position: | chrX:19127245-19127015 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 187 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 66, 34 |
Conread position: | 2-237 |
Cow position: | chrX:20505098-20505333 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 24 |
Conread position: | 2-240 |
Cow position: | chrX:25106613-25106835 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 67, 47 |
Conread position: | 2-241 |
Cow position: | chrX:4019540-4019284 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 187 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 66, 45 |
Conread position: | 2-242 |
Cow position: | chrX:25453572-25453805 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 187 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 127, 8 |
Conread position: | 2-247 |
Cow position: | chrX:4630984-4630736 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 190 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 85, 40 |
Conread position: | 2-247 |
Cow position: | chrX:18814558-18814813 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 186 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 66, 239 |
Conread position: | 2-248 |
Cow position: | chrX:2147708-2147947 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 188 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 196, 29 |
Conread position: | 2-248 |
Cow position: | chrX:13403355-13403110 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 191 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 79, 165 |
Conread position: | 2-257 |
Cow position: | chrX:27458342-27458090 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 187 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 45, 173 |
Conread position: | 4-228 |
Cow position: | chrX:4625299-4625532 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 72, 159 |
Conread position: | 4-236 |
Cow position: | chrX:6672170-6672406 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 22 |
Conread position: | 4-245 |
Cow position: | chrX:4440240-4440486 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 187 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 70, 184 |
Conread position: | 4-245 |
Cow position: | chrX:37236398-37236636 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 197 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 64, 10 |
Conread position: | 4-249 |
Cow position: | chrX:6472101-6472351 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 196 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 72, 39 |
Conread position: | 7-234 |
Cow position: | chrX:12688682-12688451 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 176 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 67, 23 |
Conread position: | 7-236 |
Cow position: | chrX:2186650-2186883 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 180 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 73, 23 |
Conread position: | 8-248 |
Cow position: | chrX:4590345-4590588 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 195 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 66, 27 |
Conread position: | 9-174 |
Cow position: | chrX:4948101-4947932 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 11-234 |
Cow position: | chrX:35552746-35552964 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 180 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 69, 22 |
Conread position: | 11-247 |
Cow position: | chrX:11851368-11851137 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 172 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 116, 38 |
Conread position: | 11-247 |
Cow position: | chrX:18518438-18518674 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 31 |
Conread position: | 13-233 |
Cow position: | chrX:12227374-12227588 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 61, 28 |
Conread position: | 13-234 |
Cow position: | chrX:11982990-11983209 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 172 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 7, 31 |
Conread position: | 15-149 |
Cow position: | chrX:28939190-28939322 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 21-235 |
Cow position: | chrX:16817058-16817267 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 164 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 177, 128 |
Conread position: | 33-248 |
Cow position: | chrX:40350322-40350540 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 168 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 36, 112 |
Conread position: | 36-228 |
Cow position: | chrX:1427693-1427893 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 153 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 33, 143 |
Conread position: | 37-233 |
Cow position: | chrX:30784978-30785179 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 156 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 32, 17 |
Conread position: | 41-196 |
Cow position: | chrX:25921368-25921217 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 126 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 40, 13 |
Conread position: | 42-236 |
Cow position: | chrX:32456212-32456390 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 46-235 |
Cow position: | chrX:7022533-7022719 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 152, 43 |
Conread position: | 68-235 |
Cow position: | chrX:25653542-25653711 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 139 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 59, 114 |
Conread position: | 70-233 |
Cow position: | chrX:19391813-19391650 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 138 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 46, 12 |
Conread position: | 75-230 |
Cow position: | chrX:34035606-34035763 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 54, 105 |
Conread position: | 83-239 |
Cow position: | chrX:24286532-24286686 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 130 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 45, 65 |
Conread position: | 87-222 |
Cow position: | chrX:30729307-30729170 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 40, 95 |
Conread position: | 87-233 |
Cow position: | chrX:503087-502939 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 40, 95 |
Conread position: | 89-235 |
Cow position: | chrX:24886317-24886169 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 39, 93 |
Conread position: | 105-241 |
Cow position: | chrX:8557698-8557561 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 114 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 34, 75 |
Show alignments to all cow chromosomes.