Cow genome map

Conread name: Ss1.1-Pig4-TMW8047D10.3

Conread position: 5-221
Cow position: chr14:44290947-44291163 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 162, 12

Conread position: 5-222
Cow position: chr14:1660337-1660549 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 154, 9

Conread position: 5-265
Cow position: chr14:22029587-22029327 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 9

Conread position: 5-285
Cow position: chr14:46123008-46123290 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 12

Conread position: 18-222
Cow position: chr14:32448851-32449057 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr14:37226048-37226254 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 72

Conread position: 18-222
Cow position: chr14:50113260-50113462 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 76

Conread position: 18-265
Cow position: chr14:5531229-5531476 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 198, 140

Conread position: 18-265
Cow position: chr14:15273661-15273412 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 89, 77

Conread position: 18-265
Cow position: chr14:19326368-19326119 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 76

Conread position: 18-308
Cow position: chr14:13781755-13782049 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 206, 145

Conread position: 25-222
Cow position: chr14:191951-192148 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 78, 69

Conread position: 25-222
Cow position: chr14:16998137-16997942 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 57

Conread position: 25-222
Cow position: chr14:48252425-48252229 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 70

Conread position: 33-221
Cow position: chr14:26457038-26457225 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 31

Conread position: 34-159
Cow position: chr14:34999024-34999149 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 34-207
Cow position: chr14:5514842-5515017 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 34-209
Cow position: chr14:32473236-32473059 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 34-221
Cow position: chr14:37256068-37256254 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 72, 61

Conread position: 34-222
Cow position: chr14:12741137-12740947 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 61

Conread position: 34-222
Cow position: chr14:16917821-16917632 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 61

Conread position: 34-222
Cow position: chr14:43560141-43560327 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 162, 89

Conread position: 34-223
Cow position: chr14:11835537-11835729 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 34-233
Cow position: chr14:45087112-45087309 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 104

Conread position: 34-241
Cow position: chr14:9849987-9849790 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 84

Conread position: 34-265
Cow position: chr14:28209805-28210039 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 60

Conread position: 34-265
Cow position: chr14:34668883-34668648 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 60

Conread position: 34-266
Cow position: chr14:34904261-34904495 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 34-266
Cow position: chr14:44691087-44691319 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 60

Conread position: 34-267
Cow position: chr14:20970325-20970097 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 30

Conread position: 35-221
Cow position: chr14:36172217-36172406 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 35-222
Cow position: chr14:34763246-34763057 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 35-222
Cow position: chr14:45027047-45026860 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 36-172
Cow position: chr14:14171874-14172010 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 36-220
Cow position: chr14:23255432-23255246 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-220
Cow position: chr14:41272284-41272098 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr14:7988425-7988610 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr14:9450622-9450437 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr14:17489418-17489231 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 36-222
Cow position: chr14:19549107-19549292 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr14:30582210-30582025 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr14:30713874-30713686 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 36-222
Cow position: chr14:43556867-43557055 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 79

Conread position: 36-222
Cow position: chr14:46221990-46222178 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr14:46503601-46503785 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 36-222
Cow position: chr14:46638537-46638722 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 36-258
Cow position: chr14:19205502-19205720 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 123, 65

Conread position: 37-221
Cow position: chr14:40344222-40344408 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 37-1283
Cow position: chr14:16807410-16806163 (view UCSC Genome Browser custom track)
Alignm length: 1248
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 38-222
Cow position: chr14:11475378-11475192 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 57

Conread position: 38-222
Cow position: chr14:17758712-17758521 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 54

Conread position: 39-222
Cow position: chr14:20563829-20563644 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 73-265
Cow position: chr14:21024878-21024684 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 60

Conread position: 284-994
Cow position: chr14:13825001-13824284 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 213

Conread position: 291-583
Cow position: chr14:40665325-40665617 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 83

Conread position: 292-583
Cow position: chr14:1240551-1240250 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 61, 20

Conread position: 307-585
Cow position: chr14:40985129-40984842 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 6

Conread position: 308-479
Cow position: chr14:40733726-40733901 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 41

Conread position: 313-578
Cow position: chr14:672097-671835 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 103, 64

Conread position: 314-601
Cow position: chr14:47415613-47415908 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 173

Conread position: 319-574
Cow position: chr14:50319614-50319352 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 38

Conread position: 331-580
Cow position: chr14:1660733-1660992 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 331-584
Cow position: chr14:41445282-41445545 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 189

Conread position: 337-584
Cow position: chr14:31709143-31709401 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 343-592
Cow position: chr14:33891971-33892226 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 19

Conread position: 352-585
Cow position: chr14:7378179-7377937 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 591-875
Cow position: chr14:23950770-23951056 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 27

Conread position: 591-996
Cow position: chr14:36173558-36173972 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 269
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 249

Conread position: 591-1005
Cow position: chr14:14113918-14114337 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 262
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 286

Conread position: 591-1024
Cow position: chr14:34764686-34765118 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 272
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 68

Conread position: 684-1004
Cow position: chr14:40735247-40735555 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 10

Conread position: 688-996
Cow position: chr14:40665774-40666070 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 16

Conread position: 688-1030
Cow position: chr14:47918831-47918495 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 16

Conread position: 689-991
Cow position: chr14:41477638-41477940 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 16

Conread position: 689-998
Cow position: chr14:33892489-33892794 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 66

Conread position: 689-1020
Cow position: chr14:13097799-13098129 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 14

Conread position: 696-996
Cow position: chr14:11755835-11756134 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 15, 8

Conread position: 696-996
Cow position: chr14:37943737-37944044 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 42

Conread position: 696-997
Cow position: chr14:17732721-17732415 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 16, 9

Conread position: 696-1019
Cow position: chr14:7377772-7377452 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 7

Conread position: 698-1020
Cow position: chr14:12903048-12903370 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 202
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 174

Conread position: 703-946
Cow position: chr14:39321558-39321798 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 128

Conread position: 761-1003
Cow position: chr14:30463136-30463372 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 7

Conread position: 771-1019
Cow position: chr14:13092605-13092849 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 14

Conread position: 780-1004
Cow position: chr14:26818499-26818721 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 205, 55

Conread position: 788-1019
Cow position: chr14:42916824-42917041 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 816-1004
Cow position: chr14:50331111-50330924 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 19

Show alignments to all cow chromosomes.