Cow genome map

Conread name: Ss1.1-Pig4-TMW8047D10.3

Conread position: 1-264
Cow position: chr15:21804865-21805125 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 158, 12

Conread position: 3-218
Cow position: chr15:37630900-37631114 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 11

Conread position: 5-265
Cow position: chr15:42938789-42939051 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 23

Conread position: 8-222
Cow position: chr15:2900368-2900154 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 151, 7

Conread position: 8-222
Cow position: chr15:32066366-32066158 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 9-265
Cow position: chr15:4387638-4387895 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 5

Conread position: 15-222
Cow position: chr15:37472669-37472468 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 91, 19

Conread position: 18-222
Cow position: chr15:6154038-6153832 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 77

Conread position: 18-222
Cow position: chr15:15345213-15345007 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 141, 0

Conread position: 18-222
Cow position: chr15:24297085-24297291 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr15:31363357-31363563 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 18-265
Cow position: chr15:51219633-51219882 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 141, 105

Conread position: 23-222
Cow position: chr15:4673141-4673342 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 71

Conread position: 25-265
Cow position: chr15:18578610-18578852 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 60

Conread position: 25-273
Cow position: chr15:48375950-48376196 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 134, 182

Conread position: 32-241
Cow position: chr15:33640473-33640259 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 34-159
Cow position: chr15:4767053-4767178 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 34-200
Cow position: chr15:12952177-12952344 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 34-212
Cow position: chr15:49198337-49198516 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 125, 41

Conread position: 34-222
Cow position: chr15:4917106-4917296 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 60

Conread position: 34-222
Cow position: chr15:6384646-6384456 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 34-222
Cow position: chr15:9911388-9911201 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 34-222
Cow position: chr15:38982558-38982748 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 34-224
Cow position: chr15:13679310-13679497 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 125, 54

Conread position: 34-225
Cow position: chr15:51227021-51227211 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 60

Conread position: 34-265
Cow position: chr15:4638844-4639075 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 56

Conread position: 34-265
Cow position: chr15:6551855-6551621 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 61

Conread position: 34-265
Cow position: chr15:20412506-20412739 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 60

Conread position: 34-265
Cow position: chr15:30727336-30727110 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 149, 127

Conread position: 34-266
Cow position: chr15:14580239-14580004 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 61

Conread position: 34-266
Cow position: chr15:48008317-48008558 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 71

Conread position: 34-276
Cow position: chr15:4727115-4727355 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 185, 129

Conread position: 34-298
Cow position: chr15:13612896-13612634 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 49

Conread position: 34-479
Cow position: chr15:24795795-24796256 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 301
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 79, 22

Conread position: 35-220
Cow position: chr15:24719139-24719326 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 37

Conread position: 35-221
Cow position: chr15:2410788-2410600 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 35-222
Cow position: chr15:1784243-1784431 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 124, 53

Conread position: 35-222
Cow position: chr15:3722121-3721935 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 35-222
Cow position: chr15:8059898-8060086 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 131, 31

Conread position: 35-226
Cow position: chr15:28432980-28433173 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 35-265
Cow position: chr15:8101363-8101598 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 211

Conread position: 36-214
Cow position: chr15:20848701-20848522 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 32

Conread position: 36-220
Cow position: chr15:5009725-5009541 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 36-222
Cow position: chr15:2645737-2645549 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr15:4948414-4948602 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr15:6382238-6382054 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 130, 10

Conread position: 36-222
Cow position: chr15:6563087-6563275 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 36-222
Cow position: chr15:6614933-6615118 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr15:7564913-7565099 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 123, 172

Conread position: 36-222
Cow position: chr15:13429733-13429920 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 55

Conread position: 36-222
Cow position: chr15:16189860-16189672 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr15:18228974-18229162 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr15:18265850-18265665 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr15:20017568-20017380 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr15:20405826-20405640 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 172

Conread position: 36-222
Cow position: chr15:25205096-25204909 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 123, 39

Conread position: 36-222
Cow position: chr15:32491979-32491792 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 59

Conread position: 36-222
Cow position: chr15:32713115-32713304 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 36-222
Cow position: chr15:33123291-33123479 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 36-222
Cow position: chr15:36330548-36330360 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 36-222
Cow position: chr15:43739349-43739161 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 36-222
Cow position: chr15:50149231-50149419 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 37-222
Cow position: chr15:42944696-42944509 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 40-265
Cow position: chr15:27747923-27748151 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 54

Conread position: 40-267
Cow position: chr15:38237950-38238174 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 158, 121

Conread position: 40-267
Cow position: chr15:41786768-41786537 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 200

Conread position: 44-222
Cow position: chr15:27635345-27635525 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 86-297
Cow position: chr15:27078899-27078687 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 147, 72

Conread position: 117-267
Cow position: chr15:26361709-26361563 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 18

Conread position: 272-537
Cow position: chr15:12952478-12952749 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 34

Conread position: 291-585
Cow position: chr15:46551849-46551542 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 251

Conread position: 296-574
Cow position: chr15:40647182-40646890 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 164

Conread position: 308-580
Cow position: chr15:23543541-23543271 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 66, 27

Conread position: 308-585
Cow position: chr15:53728913-53728624 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 198

Conread position: 308-669
Cow position: chr15:22455747-22455374 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 5

Conread position: 313-583
Cow position: chr15:40057858-40057579 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 64, 0

Conread position: 317-535
Cow position: chr15:34365120-34364905 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 11

Conread position: 331-580
Cow position: chr15:18229347-18229606 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 331-580
Cow position: chr15:23709231-23708972 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 161

Conread position: 334-580
Cow position: chr15:59921-60170 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 6

Conread position: 336-586
Cow position: chr15:2014786-2015042 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 343-574
Cow position: chr15:41195827-41196065 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 147

Conread position: 604-1019
Cow position: chr15:22242276-22241854 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 278
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 37

Conread position: 605-1024
Cow position: chr15:632267-631848 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 18

Conread position: 665-968
Cow position: chr15:6996017-6995698 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 6, 224

Conread position: 686-1004
Cow position: chr15:8953203-8953517 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 78, 36

Conread position: 688-1002
Cow position: chr15:13479335-13479026 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 145, 71

Conread position: 688-1004
Cow position: chr15:5454493-5454814 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 205
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 18

Conread position: 688-1028
Cow position: chr15:20416210-20416531 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 689-1003
Cow position: chr15:12770269-12770578 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 99

Conread position: 690-1024
Cow position: chr15:46105936-46106269 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 215
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 15

Conread position: 693-1004
Cow position: chr15:42634360-42634050 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 104

Conread position: 696-997
Cow position: chr15:12721131-12721425 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 193
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 64

Conread position: 696-997
Cow position: chr15:12953395-12953691 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 7

Conread position: 697-982
Cow position: chr15:16925979-16925701 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 83

Conread position: 697-1026
Cow position: chr15:24395455-24395130 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 79

Conread position: 707-1029
Cow position: chr15:27759826-27759500 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 90

Conread position: 730-997
Cow position: chr15:46551341-46551077 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 78

Conread position: 731-958
Cow position: chr15:48377159-48377392 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 14

Conread position: 767-988
Cow position: chr15:18707930-18708148 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 180, 30

Conread position: 786-965
Cow position: chr15:29670102-29670281 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 88

Conread position: 788-1002
Cow position: chr15:28835980-28835764 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 88

Conread position: 797-997
Cow position: chr15:5040239-5040437 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 154, 17

Conread position: 820-996
Cow position: chr15:10325358-10325178 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.