Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047D10.3 |
| Conread position: | 5-190 |
| Cow position: | chr20:24484621-24484804 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 154, 46 |
| Conread position: | 5-222 |
| Cow position: | chr20:5537214-5537429 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 89 |
| Conread position: | 8-220 |
| Cow position: | chr20:7598565-7598353 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 149, 9 |
| Conread position: | 18-222 |
| Cow position: | chr20:13765192-13765398 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 18-265 |
| Cow position: | chr20:12436099-12435852 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 77 |
| Conread position: | 25-222 |
| Cow position: | chr20:23801193-23801392 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 69 |
| Conread position: | 34-159 |
| Cow position: | chr20:3307167-3307290 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 34-220 |
| Cow position: | chr20:14748256-14748437 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 34-222 |
| Cow position: | chr20:19342125-19342315 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 34-222 |
| Cow position: | chr20:23467353-23467163 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 34-265 |
| Cow position: | chr20:21396842-21397071 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 188, 124 |
| Conread position: | 34-265 |
| Cow position: | chr20:23805566-23805333 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 133, 203 |
| Conread position: | 35-221 |
| Cow position: | chr20:7513652-7513841 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 35-222 |
| Cow position: | chr20:825094-825277 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 35-222 |
| Cow position: | chr20:39881653-39881842 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 35-266 |
| Cow position: | chr20:10867473-10867239 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 36-222 |
| Cow position: | chr20:752460-752648 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 36-222 |
| Cow position: | chr20:15602449-15602261 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 36-222 |
| Cow position: | chr20:18093872-18093684 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 36-222 |
| Cow position: | chr20:19440231-19440416 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 36-222 |
| Cow position: | chr20:21718878-21719066 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 36-222 |
| Cow position: | chr20:24541737-24541926 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 36-222 |
| Cow position: | chr20:28445031-28444847 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 36-222 |
| Cow position: | chr20:29757965-29757777 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 36-222 |
| Cow position: | chr20:30430587-30430772 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 36-266 |
| Cow position: | chr20:10922606-10922373 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 69, 59 |
| Conread position: | 37-220 |
| Cow position: | chr20:25332621-25332439 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 40-274 |
| Cow position: | chr20:12548089-12547858 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 197, 121 |
| Conread position: | 43-222 |
| Cow position: | chr20:34459984-34459803 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 256-442 |
| Cow position: | chr20:23023653-23023457 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 269-558 |
| Cow position: | chr20:29547395-29547099 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 24, 235 |
| Conread position: | 293-530 |
| Cow position: | chr20:12547441-12547192 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 212 |
| Conread position: | 297-586 |
| Cow position: | chr20:5936355-5936057 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 307-574 |
| Cow position: | chr20:7232487-7232759 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 196 |
| Conread position: | 307-574 |
| Cow position: | chr20:34361892-34362158 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 6 |
| Conread position: | 314-585 |
| Cow position: | chr20:13073562-13073835 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 122 |
| Conread position: | 331-580 |
| Cow position: | chr20:16559856-16559597 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 591-947 |
| Cow position: | chr20:14850490-14850123 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 686-978 |
| Cow position: | chr20:7608699-7608985 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 698-995 |
| Cow position: | chr20:3307999-3308294 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 69, 174 |
| Conread position: | 698-1030 |
| Cow position: | chr20:4243154-4243479 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 65, 140 |
| Conread position: | 699-1029 |
| Cow position: | chr20:19261462-19261136 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 321, 98 |
| Conread position: | 700-1018 |
| Cow position: | chr20:6768360-6768667 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 254, 152 |
| Conread position: | 763-1018 |
| Cow position: | chr20:26275746-26275490 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 74, 111 |
| Conread position: | 1116-1470 |
| Cow position: | chr20:16850446-16850803 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 17 |
Show alignments to all cow chromosomes.