Cow genome map

Conread name: Ss1.1-Pig4-TMW8047D10.3

Conread position: 5-222
Cow position: chr22:36185852-36186069 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 154, 12

Conread position: 7-222
Cow position: chr22:40588634-40588845 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 154, 0

Conread position: 9-222
Cow position: chr22:558477-558264 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 20

Conread position: 14-225
Cow position: chr22:40608648-40608853 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 152, 20

Conread position: 18-222
Cow position: chr22:21591662-21591864 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr22:28555934-28555728 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 141, 0

Conread position: 18-265
Cow position: chr22:1518793-1518545 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 77

Conread position: 18-265
Cow position: chr22:11608877-11609127 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 76

Conread position: 18-265
Cow position: chr22:17326247-17325998 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 141, 100

Conread position: 18-265
Cow position: chr22:36859312-36859065 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 76

Conread position: 18-268
Cow position: chr22:28784352-28784605 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 16

Conread position: 18-270
Cow position: chr22:6334050-6334299 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 166
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 77

Conread position: 18-270
Cow position: chr22:39467275-39467024 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 85, 76

Conread position: 21-266
Cow position: chr22:37537236-37536989 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 74

Conread position: 25-265
Cow position: chr22:44936183-44936426 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 100, 166

Conread position: 34-211
Cow position: chr22:35827011-35826833 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 135, 44

Conread position: 34-219
Cow position: chr22:10620516-10620703 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 0

Conread position: 34-222
Cow position: chr22:50289-50479 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 151, 15

Conread position: 34-222
Cow position: chr22:1482666-1482853 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 60

Conread position: 34-222
Cow position: chr22:7278797-7278982 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 76

Conread position: 34-222
Cow position: chr22:11806498-11806313 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 34-222
Cow position: chr22:14156911-14156718 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 46

Conread position: 34-222
Cow position: chr22:26105898-26105711 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 61

Conread position: 34-222
Cow position: chr22:34170591-34170781 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 58

Conread position: 34-222
Cow position: chr22:39039719-39039535 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 151

Conread position: 34-222
Cow position: chr22:41847297-41847111 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 34-222
Cow position: chr22:44605687-44605501 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 72, 61

Conread position: 34-225
Cow position: chr22:39921321-39921504 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 66

Conread position: 34-265
Cow position: chr22:42993426-42993659 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 125, 220

Conread position: 35-222
Cow position: chr22:21193949-21193760 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 35-222
Cow position: chr22:35669414-35669225 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 60

Conread position: 35-265
Cow position: chr22:31314792-31315025 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 35-273
Cow position: chr22:29889759-29889519 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 123, 158

Conread position: 35-274
Cow position: chr22:13546658-13546416 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 124, 183

Conread position: 36-221
Cow position: chr22:3516077-3515888 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 36-222
Cow position: chr22:539386-539571 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 36-222
Cow position: chr22:980542-980728 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 172

Conread position: 36-222
Cow position: chr22:3276097-3275909 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr22:8132530-8132345 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr22:10548898-10549083 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr22:10578235-10578047 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr22:10907946-10907761 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 126

Conread position: 36-222
Cow position: chr22:11802797-11802609 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr22:18029526-18029714 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 169

Conread position: 36-222
Cow position: chr22:20238580-20238395 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr22:22934228-22934041 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 159

Conread position: 36-222
Cow position: chr22:27307713-27307527 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 128

Conread position: 36-222
Cow position: chr22:28712931-28713116 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr22:34604474-34604659 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 36-222
Cow position: chr22:43235099-43235283 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 36-222
Cow position: chr22:45280196-45280381 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 37-222
Cow position: chr22:696180-696367 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 39-274
Cow position: chr22:9461313-9461538 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 5, 56

Conread position: 40-222
Cow position: chr22:44398691-44398875 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 54

Conread position: 58-222
Cow position: chr22:19019421-19019257 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 17

Conread position: 292-585
Cow position: chr22:33954859-33955154 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 58

Conread position: 305-550
Cow position: chr22:8765552-8765797 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 119, 91

Conread position: 308-498
Cow position: chr22:14100334-14100536 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 308-524
Cow position: chr22:23506255-23506477 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 68, 84

Conread position: 308-579
Cow position: chr22:7595333-7595604 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 70, 98

Conread position: 308-583
Cow position: chr22:36364475-36364757 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 72

Conread position: 308-584
Cow position: chr22:12941990-12941706 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 27

Conread position: 308-585
Cow position: chr22:26455194-26454900 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 280

Conread position: 308-586
Cow position: chr22:8768370-8768658 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 16

Conread position: 325-585
Cow position: chr22:37997637-37997369 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 14

Conread position: 328-580
Cow position: chr22:18604185-18603924 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 7

Conread position: 340-586
Cow position: chr22:37812359-37812599 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 146, 22

Conread position: 381-585
Cow position: chr22:7134445-7134647 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 38

Conread position: 398-584
Cow position: chr22:3877622-3877434 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 165

Conread position: 593-1004
Cow position: chr22:21188031-21187623 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 44

Conread position: 642-945
Cow position: chr22:22977136-22977451 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 29

Conread position: 651-994
Cow position: chr22:12445051-12445403 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 238

Conread position: 673-1000
Cow position: chr22:653654-653329 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 208
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 40

Conread position: 687-997
Cow position: chr22:13865704-13865396 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 76, 184

Conread position: 688-967
Cow position: chr22:42069065-42068789 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 19

Conread position: 688-995
Cow position: chr22:14101195-14101495 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 60

Conread position: 693-980
Cow position: chr22:36852780-36852498 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 13

Conread position: 696-978
Cow position: chr22:13826733-13826458 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 696-1028
Cow position: chr22:7230985-7231315 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 7

Conread position: 698-966
Cow position: chr22:22753280-22753017 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 75

Conread position: 698-1023
Cow position: chr22:19140645-19140323 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 42

Conread position: 705-1002
Cow position: chr22:14509064-14508770 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 108

Conread position: 731-992
Cow position: chr22:31155348-31155073 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 8

Conread position: 731-1004
Cow position: chr22:23853331-23853062 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 159, 121

Conread position: 738-996
Cow position: chr22:6229656-6229398 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 44

Conread position: 760-1016
Cow position: chr22:29886008-29885758 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 766-1005
Cow position: chr22:11353981-11353738 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 112

Conread position: 785-1000
Cow position: chr22:33219339-33219548 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 75

Conread position: 793-1022
Cow position: chr22:42428108-42427885 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 206, 20

Conread position: 797-998
Cow position: chr22:31353905-31353704 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 152, 76

Conread position: 797-1017
Cow position: chr22:14484081-14484297 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 195, 82

Conread position: 797-1024
Cow position: chr22:46442863-46442639 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 205, 33

Show alignments to all cow chromosomes.