Cow genome map

Conread name: Ss1.1-Pig4-TMW8047D10.3

Conread position: 4-243
Cow position: chr23:37129610-37129362 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 155, 0

Conread position: 5-214
Cow position: chr23:31165046-31165254 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 9

Conread position: 5-265
Cow position: chr23:15527804-15528064 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 98, 89

Conread position: 8-220
Cow position: chr23:528295-528507 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 151, 7

Conread position: 8-331
Cow position: chr23:4890913-4891239 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 7

Conread position: 9-226
Cow position: chr23:15659326-15659114 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 59

Conread position: 17-242
Cow position: chr23:9213943-9214155 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 142, 39

Conread position: 18-265
Cow position: chr23:2760136-2760377 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 50

Conread position: 18-265
Cow position: chr23:15179298-15179545 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 76

Conread position: 18-265
Cow position: chr23:37200287-37200040 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 77

Conread position: 24-265
Cow position: chr23:11781030-11781271 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 70

Conread position: 25-222
Cow position: chr23:22145066-22144867 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 70

Conread position: 34-221
Cow position: chr23:7043672-7043485 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 57

Conread position: 34-222
Cow position: chr23:19491801-19491991 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 34-222
Cow position: chr23:41568420-41568608 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 132, 91

Conread position: 34-265
Cow position: chr23:4515784-4516017 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 34-265
Cow position: chr23:36029137-36028903 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 61

Conread position: 34-274
Cow position: chr23:1958409-1958649 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 38

Conread position: 35-222
Cow position: chr23:37652159-37652347 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 124, 46

Conread position: 36-222
Cow position: chr23:943223-943411 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 0

Conread position: 36-222
Cow position: chr23:4266596-4266409 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 172

Conread position: 36-222
Cow position: chr23:7313847-7313659 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr23:11713613-11713425 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 78, 89

Conread position: 36-222
Cow position: chr23:15568678-15568490 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr23:28220955-28221140 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr23:36097065-36097253 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr23:41142591-41142775 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 36-392
Cow position: chr23:32350512-32350156 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 351, 122

Conread position: 38-222
Cow position: chr23:25350604-25350790 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 51-222
Cow position: chr23:21773652-21773479 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 58-222
Cow position: chr23:14264617-14264781 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 56

Conread position: 73-224
Cow position: chr23:7493092-7492939 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 22

Conread position: 288-585
Cow position: chr23:16702314-16702628 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 73

Conread position: 297-576
Cow position: chr23:38721156-38721440 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 26

Conread position: 305-514
Cow position: chr23:9214381-9214596 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 78, 68

Conread position: 307-580
Cow position: chr23:3708997-3709279 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 6

Conread position: 308-551
Cow position: chr23:25641401-25641656 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 14

Conread position: 308-579
Cow position: chr23:34254121-34253840 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 52

Conread position: 308-582
Cow position: chr23:17242734-17243012 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 66, 183

Conread position: 308-586
Cow position: chr23:27755469-27755753 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 311-583
Cow position: chr23:15202577-15202848 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 8

Conread position: 314-581
Cow position: chr23:14572424-14572147 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 36, 235

Conread position: 325-580
Cow position: chr23:4266005-4265741 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 11

Conread position: 591-1006
Cow position: chr23:3878196-3877783 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 256
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 105

Conread position: 688-966
Cow position: chr23:25031115-25030836 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 16

Conread position: 688-1004
Cow position: chr23:14116883-14116563 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 16

Conread position: 688-1004
Cow position: chr23:15203249-15203548 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 28, 17

Conread position: 705-994
Cow position: chr23:17243412-17243702 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 16

Conread position: 716-989
Cow position: chr23:25641842-25642111 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 41

Conread position: 716-1028
Cow position: chr23:250734-250427 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 197
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 233, 7

Conread position: 717-993
Cow position: chr23:35430396-35430118 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 144

Conread position: 726-981
Cow position: chr23:24980136-24980390 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 148

Conread position: 772-1004
Cow position: chr23:30838426-30838200 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 802-1000
Cow position: chr23:16218793-16218989 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.