Cow genome map

Conread name: Ss1.1-Pig4-TMW8047D10.3

Conread position: 5-265
Cow position: chr24:16559998-16559736 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 90

Conread position: 6-223
Cow position: chr24:12239176-12239395 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 164

Conread position: 9-264
Cow position: chr24:31085409-31085675 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 20

Conread position: 14-148
Cow position: chr24:33029496-33029628 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 18-184
Cow position: chr24:8606665-8606833 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr24:6411798-6412004 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr24:19835726-19835932 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr24:19884612-19884818 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 76

Conread position: 18-225
Cow position: chr24:22973390-22973596 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 85, 76

Conread position: 18-265
Cow position: chr24:12333403-12333153 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 76

Conread position: 18-265
Cow position: chr24:20285025-20284775 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 76

Conread position: 18-265
Cow position: chr24:29189605-29189855 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 76

Conread position: 24-222
Cow position: chr24:11691673-11691475 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 72

Conread position: 25-222
Cow position: chr24:13234566-13234764 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 134, 11

Conread position: 25-222
Cow position: chr24:14880559-14880367 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 9

Conread position: 34-210
Cow position: chr24:16208679-16208502 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 137

Conread position: 34-220
Cow position: chr24:20123003-20122816 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 79, 138

Conread position: 34-221
Cow position: chr24:6678379-6678565 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 83

Conread position: 34-222
Cow position: chr24:12204027-12203841 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 60

Conread position: 34-222
Cow position: chr24:16857231-16857417 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 71

Conread position: 34-222
Cow position: chr24:36037877-36037690 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 34-222
Cow position: chr24:38004607-38004418 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 165

Conread position: 34-225
Cow position: chr24:22818180-22818366 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 60

Conread position: 34-266
Cow position: chr24:14759218-14759450 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 72, 38

Conread position: 34-267
Cow position: chr24:22322053-22322288 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 180

Conread position: 35-220
Cow position: chr24:6657917-6657734 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 36-222
Cow position: chr24:208664-208477 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 8

Conread position: 36-222
Cow position: chr24:3849904-3850092 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr24:6069522-6069334 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr24:6440089-6440277 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr24:11150785-11150600 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr24:12698681-12698493 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr24:14350336-14350523 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 123, 97

Conread position: 36-222
Cow position: chr24:17323029-17323217 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 36-222
Cow position: chr24:19689241-19689056 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr24:20366702-20366890 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr24:21248611-21248423 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-223
Cow position: chr24:6327029-6326843 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 36-223
Cow position: chr24:7063903-7064088 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 39-247
Cow position: chr24:18867603-18867395 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 120, 168

Conread position: 297-585
Cow position: chr24:16857578-16857864 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 16

Conread position: 307-533
Cow position: chr24:23737998-23737775 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 120, 41

Conread position: 308-574
Cow position: chr24:25419403-25419134 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 25

Conread position: 308-584
Cow position: chr24:22322750-22323032 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 140

Conread position: 308-584
Cow position: chr24:27586464-27586740 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 11

Conread position: 310-585
Cow position: chr24:18867263-18866975 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 0

Conread position: 319-585
Cow position: chr24:14767181-14767452 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 235

Conread position: 334-585
Cow position: chr24:19052613-19052355 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 42, 23

Conread position: 379-582
Cow position: chr24:10647082-10646874 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 688-997
Cow position: chr24:42386283-42385983 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 212, 71

Conread position: 689-946
Cow position: chr24:16516806-16516542 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 191

Conread position: 689-997
Cow position: chr24:33036553-33036255 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 70

Conread position: 689-1000
Cow position: chr24:28592757-28592459 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 132, 172

Conread position: 699-997
Cow position: chr24:37222670-37222375 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 196
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 7

Conread position: 699-1017
Cow position: chr24:42096965-42097281 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 14, 5

Conread position: 702-1005
Cow position: chr24:21205592-21205879 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 19

Conread position: 703-982
Cow position: chr24:10879701-10879970 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 208, 77

Conread position: 707-948
Cow position: chr24:20121923-20121694 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 710-1002
Cow position: chr24:31184934-31185229 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 53, 127

Conread position: 714-978
Cow position: chr24:10646681-10646414 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 127

Conread position: 749-1004
Cow position: chr24:6216562-6216305 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 66

Conread position: 750-993
Cow position: chr24:37857478-37857226 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 39

Conread position: 754-1004
Cow position: chr24:18143692-18143449 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 110

Conread position: 759-981
Cow position: chr24:19588053-19588269 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 86, 99

Conread position: 760-1011
Cow position: chr24:42584798-42585039 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 36

Conread position: 797-1013
Cow position: chr24:41780998-41780792 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 38

Conread position: 802-990
Cow position: chr24:18629764-18629951 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 138, 76

Show alignments to all cow chromosomes.