Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047D10.3 |
| Conread position: | 5-265 |
| Cow position: | chr27:20809629-20809890 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 8-222 |
| Cow position: | chr27:22798230-22798015 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 28 |
| Conread position: | 9-221 |
| Cow position: | chr27:9331963-9332178 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 83 |
| Conread position: | 18-184 |
| Cow position: | chr27:23293792-23293955 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 18-222 |
| Cow position: | chr27:26327291-26327493 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 76 |
| Conread position: | 18-265 |
| Cow position: | chr27:5913164-5913414 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 133, 127 |
| Conread position: | 18-265 |
| Cow position: | chr27:9990979-9990736 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 18-265 |
| Cow position: | chr27:19524487-19524237 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 18-265 |
| Cow position: | chr27:24297016-24296766 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 141, 202 |
| Conread position: | 22-265 |
| Cow position: | chr27:12749265-12749508 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 25-222 |
| Cow position: | chr27:3233286-3233090 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 81, 70 |
| Conread position: | 25-270 |
| Cow position: | chr27:15034861-15034612 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 70 |
| Conread position: | 33-222 |
| Cow position: | chr27:30034408-30034599 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 34-209 |
| Cow position: | chr27:27288742-27288919 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 69, 60 |
| Conread position: | 34-221 |
| Cow position: | chr27:8200053-8200238 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 111, 130 |
| Conread position: | 34-222 |
| Cow position: | chr27:3995647-3995458 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 133, 95 |
| Conread position: | 34-222 |
| Cow position: | chr27:15635087-15634900 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 34-222 |
| Cow position: | chr27:25801932-25801743 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 154 |
| Conread position: | 34-275 |
| Cow position: | chr27:10378178-10378418 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 185, 54 |
| Conread position: | 36-222 |
| Cow position: | chr27:797360-797176 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 36-222 |
| Cow position: | chr27:22743136-22742951 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 37-222 |
| Cow position: | chr27:16032143-16031960 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 43-221 |
| Cow position: | chr27:30571077-30571257 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 116, 175 |
| Conread position: | 45-219 |
| Cow position: | chr27:1847119-1846944 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 313-596 |
| Cow position: | chr27:21107605-21107314 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 44 |
| Conread position: | 344-573 |
| Cow position: | chr27:26599558-26599797 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 387-606 |
| Cow position: | chr27:12555826-12555607 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 59 |
| Conread position: | 591-968 |
| Cow position: | chr27:22037583-22037959 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 698-1017 |
| Cow position: | chr27:16037908-16037593 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 81, 56 |
| Conread position: | 699-1029 |
| Cow position: | chr27:16110083-16110409 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 734-1029 |
| Cow position: | chr27:17050362-17050064 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 740-974 |
| Cow position: | chr27:13919727-13919957 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 63, 19 |
Show alignments to all cow chromosomes.