Cow genome map

Conread name: Ss1.1-Pig4-TMW8047D10.3

Conread position: 4-223
Cow position: chr29:29617066-29616849 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 102, 91

Conread position: 4-265
Cow position: chr29:10821685-10821424 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 9

Conread position: 5-222
Cow position: chr29:5785045-5785261 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 154, 12

Conread position: 5-265
Cow position: chr29:15996148-15995885 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 43

Conread position: 5-270
Cow position: chr29:6933726-6933989 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 98, 89

Conread position: 14-274
Cow position: chr29:26162597-26162335 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 92, 81

Conread position: 18-222
Cow position: chr29:10645166-10644963 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr29:35274777-35274571 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 77

Conread position: 18-265
Cow position: chr29:19656146-19656396 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 141, 0

Conread position: 18-265
Cow position: chr29:39077469-39077222 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 77

Conread position: 18-267
Cow position: chr29:5341019-5340771 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 40

Conread position: 18-274
Cow position: chr29:16346449-16346707 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 69

Conread position: 24-222
Cow position: chr29:45206762-45206960 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 72

Conread position: 25-221
Cow position: chr29:17407384-17407586 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 9

Conread position: 25-222
Cow position: chr29:6215350-6215543 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 33-237
Cow position: chr29:15801636-15801838 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 34-211
Cow position: chr29:37308933-37308754 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 125, 24

Conread position: 34-221
Cow position: chr29:7750590-7750404 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 34-221
Cow position: chr29:8624931-8624745 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 61

Conread position: 34-222
Cow position: chr29:46197-46011 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 61

Conread position: 34-222
Cow position: chr29:408997-408810 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 151, 129

Conread position: 34-222
Cow position: chr29:6873611-6873424 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 78, 61

Conread position: 34-222
Cow position: chr29:7428854-7428663 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 34-222
Cow position: chr29:9640516-9640326 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 34-222
Cow position: chr29:9962667-9962853 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 14

Conread position: 34-222
Cow position: chr29:14209287-14209100 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 61

Conread position: 34-222
Cow position: chr29:14500125-14500315 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 60

Conread position: 34-222
Cow position: chr29:42805986-42806174 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 51

Conread position: 34-222
Cow position: chr29:43325773-43325963 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 60

Conread position: 34-223
Cow position: chr29:9852816-9852626 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 96

Conread position: 34-231
Cow position: chr29:29703108-29702907 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 34-252
Cow position: chr29:44600344-44600123 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 171

Conread position: 34-265
Cow position: chr29:25930258-25930024 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 61

Conread position: 34-266
Cow position: chr29:2464612-2464377 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 61

Conread position: 34-266
Cow position: chr29:5960134-5960366 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 60

Conread position: 34-266
Cow position: chr29:13018954-13019181 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 69, 60

Conread position: 35-209
Cow position: chr29:4518164-4518339 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 35-209
Cow position: chr29:18524459-18524284 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 73

Conread position: 35-222
Cow position: chr29:2839077-2838888 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 60

Conread position: 35-222
Cow position: chr29:16689094-16689281 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 124, 176

Conread position: 35-265
Cow position: chr29:530137-529906 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 60

Conread position: 35-265
Cow position: chr29:37043339-37043108 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 200

Conread position: 36-221
Cow position: chr29:21266929-21267112 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 58

Conread position: 36-222
Cow position: chr29:608367-608180 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 82

Conread position: 36-222
Cow position: chr29:667147-666959 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 36-222
Cow position: chr29:7846655-7846843 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr29:10022065-10021877 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr29:14743786-14743598 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr29:15260729-15260541 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr29:15624442-15624250 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr29:19889840-19890025 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 36-222
Cow position: chr29:21430592-21430405 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr29:28658109-28657921 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 36-222
Cow position: chr29:31095326-31095139 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 107

Conread position: 36-222
Cow position: chr29:31183668-31183856 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 78, 88

Conread position: 36-222
Cow position: chr29:39424878-39424690 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr29:40470676-40470861 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 36-225
Cow position: chr29:16037153-16036962 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 38-222
Cow position: chr29:14082459-14082278 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 112

Conread position: 38-222
Cow position: chr29:19621004-19620818 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 68, 57

Conread position: 38-222
Cow position: chr29:42256711-42256526 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 18

Conread position: 38-265
Cow position: chr29:6263735-6263508 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 181, 125

Conread position: 292-586
Cow position: chr29:5398886-5399187 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 193
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 185

Conread position: 292-586
Cow position: chr29:22990876-22990574 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 197
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 295

Conread position: 296-586
Cow position: chr29:37043005-37042708 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 16

Conread position: 297-580
Cow position: chr29:35299516-35299812 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 307-586
Cow position: chr29:33560784-33560501 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 6

Conread position: 319-551
Cow position: chr29:37271945-37271702 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 133

Conread position: 331-580
Cow position: chr29:31764675-31764932 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 190

Conread position: 334-580
Cow position: chr29:19656540-19656792 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 44

Conread position: 334-580
Cow position: chr29:21267291-21267542 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 154

Conread position: 345-595
Cow position: chr29:23169223-23169480 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 206

Conread position: 608-997
Cow position: chr29:39046639-39046233 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 263
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 129

Conread position: 685-1012
Cow position: chr29:12575187-12575509 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 207
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 19

Conread position: 688-1028
Cow position: chr29:33101182-33101515 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 6

Conread position: 696-1005
Cow position: chr29:45467893-45467580 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 139

Conread position: 698-1000
Cow position: chr29:37271510-37271204 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 6

Conread position: 698-1006
Cow position: chr29:10820645-10820337 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 189
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 174

Conread position: 698-1006
Cow position: chr29:32543207-32543516 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 10, 175

Conread position: 715-1026
Cow position: chr29:22633991-22634292 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 44

Conread position: 717-1003
Cow position: chr29:7802211-7801932 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 64

Conread position: 730-994
Cow position: chr29:321316-321052 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 139

Conread position: 760-989
Cow position: chr29:19529836-19529607 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 184, 113

Conread position: 762-1028
Cow position: chr29:3199295-3199039 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 99, 75

Conread position: 787-1000
Cow position: chr29:26016436-26016643 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 788-1004
Cow position: chr29:39325834-39326049 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 155, 88

Conread position: 797-1028
Cow position: chr29:39433394-39433164 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 56

Conread position: 805-1024
Cow position: chr29:92521-92741 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 194, 23

Show alignments to all cow chromosomes.