Cow genome map

Conread name: Ss1.1-Pig4-TMW8047D10.3

Conread position: 2-131
Cow position: chr4:43002400-43002272 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 114
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 106, 0

Conread position: 5-222
Cow position: chr4:57985971-57986187 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 9

Conread position: 7-212
Cow position: chr4:15782146-15781935 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 14-265
Cow position: chr4:12606919-12606665 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 223

Conread position: 18-222
Cow position: chr4:31563253-31563051 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 50

Conread position: 18-222
Cow position: chr4:33495521-33495729 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 18-222
Cow position: chr4:61241249-61241453 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 85, 76

Conread position: 18-222
Cow position: chr4:67382254-67382454 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 0

Conread position: 18-265
Cow position: chr4:6488402-6488156 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 75

Conread position: 18-265
Cow position: chr4:16640576-16640823 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 76

Conread position: 18-265
Cow position: chr4:17923994-17923744 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 77

Conread position: 18-265
Cow position: chr4:25597521-25597274 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 77

Conread position: 18-265
Cow position: chr4:46712630-46712384 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 216, 107

Conread position: 18-265
Cow position: chr4:67683161-67683408 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 201, 140

Conread position: 18-267
Cow position: chr4:10883504-10883754 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 76

Conread position: 18-274
Cow position: chr4:23305366-23305119 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 76

Conread position: 22-274
Cow position: chr4:43883082-43883336 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 72

Conread position: 25-198
Cow position: chr4:18815627-18815452 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 0

Conread position: 25-214
Cow position: chr4:20890222-20890034 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 134, 69

Conread position: 25-221
Cow position: chr4:67069769-67069960 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 33-225
Cow position: chr4:60045072-60044882 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 62

Conread position: 34-209
Cow position: chr4:14141097-14141271 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 34-211
Cow position: chr4:23890372-23890200 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 34-221
Cow position: chr4:15815519-15815327 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 34-222
Cow position: chr4:2115411-2115598 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 174

Conread position: 34-222
Cow position: chr4:9798257-9798070 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 34-222
Cow position: chr4:12458364-12458177 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 19

Conread position: 34-222
Cow position: chr4:34385571-34385392 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 34-222
Cow position: chr4:54971429-54971612 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 34-224
Cow position: chr4:68861346-68861534 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 83

Conread position: 34-225
Cow position: chr4:5612014-5611822 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 125, 22

Conread position: 34-230
Cow position: chr4:51747891-51747693 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 125, 156

Conread position: 34-265
Cow position: chr4:2350739-2350505 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 61

Conread position: 34-265
Cow position: chr4:43317670-43317436 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 61

Conread position: 34-266
Cow position: chr4:67650090-67649855 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 61

Conread position: 35-222
Cow position: chr4:42406604-42406790 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 0

Conread position: 35-222
Cow position: chr4:54811882-54811693 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 35-267
Cow position: chr4:47797499-47797731 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 49

Conread position: 36-216
Cow position: chr4:4418031-4418213 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 36-220
Cow position: chr4:42924191-42924005 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 40

Conread position: 36-222
Cow position: chr4:3127801-3127989 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:5442546-5442361 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 122, 0

Conread position: 36-222
Cow position: chr4:6267233-6267045 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:6568363-6568547 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 64

Conread position: 36-222
Cow position: chr4:15459425-15459237 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:16061261-16061449 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:17234027-17234215 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:18336967-18336779 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:21573749-21573934 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr4:27335917-27336105 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:29605494-29605306 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:30473197-30473382 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr4:32214159-32214343 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 36-222
Cow position: chr4:33021647-33021459 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 36-222
Cow position: chr4:35306824-35306639 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 36-222
Cow position: chr4:41956746-41956934 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 36-222
Cow position: chr4:41960882-41961070 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 0

Conread position: 36-222
Cow position: chr4:58622546-58622358 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 36-270
Cow position: chr4:55259531-55259297 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 42

Conread position: 38-222
Cow position: chr4:1928637-1928454 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 125, 0

Conread position: 38-222
Cow position: chr4:40216824-40217009 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 68

Conread position: 39-270
Cow position: chr4:42969111-42968878 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 120, 180

Conread position: 40-222
Cow position: chr4:41473854-41473674 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 40-225
Cow position: chr4:63977278-63977091 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 84

Conread position: 44-221
Cow position: chr4:50807449-50807623 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 174-279
Cow position: chr4:43002273-43002165 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 244-603
Cow position: chr4:68861637-68862011 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 234

Conread position: 254-585
Cow position: chr4:40438248-40437910 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 218
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 53

Conread position: 274-1642
Cow position: chr4:43002128-43000743 (view UCSC Genome Browser custom track)
Alignm length: 1414
Alignm identity: 1126
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 377

Conread position: 285-499
Cow position: chr4:33293226-33293015 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 107

Conread position: 296-585
Cow position: chr4:5755172-5755459 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 63

Conread position: 307-583
Cow position: chr4:49825039-49825327 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 6

Conread position: 307-669
Cow position: chr4:66262186-66262572 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 52

Conread position: 308-494
Cow position: chr4:52019265-52019452 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 11

Conread position: 308-574
Cow position: chr4:45072376-45072637 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 190, 102

Conread position: 308-585
Cow position: chr4:50807788-50808068 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 78, 63

Conread position: 312-578
Cow position: chr4:20889890-20889621 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 106

Conread position: 312-673
Cow position: chr4:50976918-50977292 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 25

Conread position: 327-586
Cow position: chr4:39933742-39934014 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 331-580
Cow position: chr4:33021280-33021021 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 591-996
Cow position: chr4:32045-32457 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 254
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 209

Conread position: 593-1004
Cow position: chr4:67649394-67648976 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 172

Conread position: 686-1030
Cow position: chr4:37948158-37947821 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 223
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 17

Conread position: 688-1004
Cow position: chr4:2720488-2720801 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 688-1017
Cow position: chr4:20888431-20888107 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 213
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 70

Conread position: 689-1022
Cow position: chr4:13588933-13588622 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 15

Conread position: 696-987
Cow position: chr4:55258763-55258467 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 9

Conread position: 696-1020
Cow position: chr4:27350815-27351139 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 201, 170

Conread position: 698-995
Cow position: chr4:43657662-43657966 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 5

Conread position: 698-1004
Cow position: chr4:17583922-17583629 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 6

Conread position: 707-1004
Cow position: chr4:36480793-36480500 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 150, 0

Conread position: 726-996
Cow position: chr4:39221922-39222193 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 148

Conread position: 757-1023
Cow position: chr4:48544036-48543771 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 32

Conread position: 758-1024
Cow position: chr4:51980003-51980270 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 18

Conread position: 762-1017
Cow position: chr4:49906908-49907152 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 26

Conread position: 787-1002
Cow position: chr4:1302815-1303020 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 789-1017
Cow position: chr4:26625723-26625501 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 213, 58

Conread position: 792-1021
Cow position: chr4:32410477-32410249 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 797-1004
Cow position: chr4:28695091-28694871 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 89

Show alignments to all cow chromosomes.