Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047H18.5
        

               Conread position:
               9-155
               

               Cow position:
               chr5:41429239-41429376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               207-398
               

               Cow position:
               chr5:50090375-50090561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               42, 140
               

               Conread position:
               224-1104
               

               Cow position:
               chr5:41429376-41430255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               882
               

               Alignm identity:
               840
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               821, 716
               

               Conread position:
               479-633
               

               Cow position:
               chr5:50090571-50090728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               623-845
               

               Cow position:
               chr5:50090954-50091167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 102
               

               Conread position:
               826-1045
               

               Cow position:
               chr5:3606810-3607029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               835-1102
               

               Cow position:
               chr5:50091381-50091657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 206
               
Show alignments to all cow chromosomes.