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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8047J22.3
        

               
Conread position:
               
67-330
               

               
Cow position:
               
chr16:19478809-19478553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 23
               

               
Conread position:
               
98-316
               

               
Cow position:
               
chr16:8494001-8493789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
203, 22
               

               
Conread position:
               
105-333
               

               
Cow position:
               
chr16:7928392-7928166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
107-337
               

               
Cow position:
               
chr16:14685398-14685173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr16:32142086-32142293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
108-323
               

               
Cow position:
               
chr16:23088839-23089050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
108-323
               

               
Cow position:
               
chr16:24895282-24895497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
108-325
               

               
Cow position:
               
chr16:12274066-12274278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr16:46548273-46548038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
109-294
               

               
Cow position:
               
chr16:13578864-13578678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
129, 8
               

               
Conread position:
               
109-300
               

               
Cow position:
               
chr16:26676689-26676506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
109-316
               

               
Cow position:
               
chr16:35074559-35074765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr16:56082368-56082161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-321
               

               
Cow position:
               
chr16:27051042-27051253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
172, 8
               

               
Conread position:
               
109-321
               

               
Cow position:
               
chr16:39683104-39682894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
191, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr16:30186642-30186851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-328
               

               
Cow position:
               
chr16:9730209-9729991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-329
               

               
Cow position:
               
chr16:7582711-7582928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
109-329
               

               
Cow position:
               
chr16:30935856-30936076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
109-330
               

               
Cow position:
               
chr16:11389576-11389357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
109-330
               

               
Cow position:
               
chr16:56615509-56615288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr16:591814-591589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr16:29712416-29712633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr16:34291294-34291083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
192, 9
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr16:17745833-17746060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr16:44744136-44743909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
191, 8
               

               
Conread position:
               
109-337
               

               
Cow position:
               
chr16:9497271-9497038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
109-337
               

               
Cow position:
               
chr16:50409242-50409470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
109-340
               

               
Cow position:
               
chr16:10171535-10171764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr16:56912693-56912480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
110-335
               

               
Cow position:
               
chr16:12091666-12091435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
110-338
               

               
Cow position:
               
chr16:55784752-55784524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 14
               

               
Conread position:
               
113-328
               

               
Cow position:
               
chr16:56670919-56670697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
114-329
               

               
Cow position:
               
chr16:25170394-25170604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
114-330
               

               
Cow position:
               
chr16:38243660-38243449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
114-331
               

               
Cow position:
               
chr16:29037920-29038133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
187, 9
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr16:3032715-3032485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
116-280
               

               
Cow position:
               
chr16:11615242-11615080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
116-304
               

               
Cow position:
               
chr16:4910522-4910334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-314
               

               
Cow position:
               
chr16:49229765-49229576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr16:6609501-6609309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-318
               

               
Cow position:
               
chr16:12220684-12220889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
116-321
               

               
Cow position:
               
chr16:15407554-15407351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
116-321
               

               
Cow position:
               
chr16:24202862-24202656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr16:9578488-9578287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr16:7011072-7011280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr16:15370687-15370892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr16:15824441-15824234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr16:32302004-32301796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
116-327
               

               
Cow position:
               
chr16:11003562-11003350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-328
               

               
Cow position:
               
chr16:38905231-38905011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
116-329
               

               
Cow position:
               
chr16:10249816-10249604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr16:258279-258067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr16:28199032-28199239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr16:50286516-50286728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
183, 8
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr16:2223394-2223177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr16:7583400-7583615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr16:38244622-38244403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr16:55683303-55683514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
116-334
               

               
Cow position:
               
chr16:18048152-18047937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
116-336
               

               
Cow position:
               
chr16:12057054-12057271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
186, 7
               

               
Conread position:
               
116-342
               

               
Cow position:
               
chr16:30662266-30662045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 8
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr16:15714112-15714341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-350
               

               
Cow position:
               
chr16:10032642-10032875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
178, 9
               

               
Conread position:
               
116-356
               

               
Cow position:
               
chr16:42038064-42038303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
234, 219
               

               
Conread position:
               
117-307
               

               
Cow position:
               
chr16:7812694-7812884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
117-314
               

               
Cow position:
               
chr16:40029880-40029687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr16:19047430-19047226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 7
               

               
Conread position:
               
117-329
               

               
Cow position:
               
chr16:33236279-33236070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr16:12507258-12507042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr16:22776418-22776203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
183, 7
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr16:34257032-34256820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr16:55961322-55961108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
121-322
               

               
Cow position:
               
chr16:55613497-55613293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
121-323
               

               
Cow position:
               
chr16:10020551-10020749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
180, 11
               

               
Conread position:
               
121-331
               

               
Cow position:
               
chr16:29814980-29815189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
181, 44
               

               
Conread position:
               
121-343
               

               
Cow position:
               
chr16:19052642-19052859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
180, 119
               

               
Conread position:
               
121-344
               

               
Cow position:
               
chr16:20824484-20824703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 120
               

               
Conread position:
               
123-300
               

               
Cow position:
               
chr16:12939630-12939800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
123-308
               

               
Cow position:
               
chr16:38708828-38708644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
123-313
               

               
Cow position:
               
chr16:6262845-6262652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr16:23955823-23955631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
102, 132
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr16:39516589-39516396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
123-321
               

               
Cow position:
               
chr16:11359160-11359352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
179, 103
               

               
Conread position:
               
123-322
               

               
Cow position:
               
chr16:4857090-4856892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
178, 31
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr16:9017882-9018086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr16:12320230-12320434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
178, 110
               

               
Conread position:
               
123-329
               

               
Cow position:
               
chr16:8068810-8068604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
123-331
               

               
Cow position:
               
chr16:8959047-8958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
178, 82
               

               
Conread position:
               
123-333
               

               
Cow position:
               
chr16:5907360-5907575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
123-336
               

               
Cow position:
               
chr16:13696673-13696459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
123-336
               

               
Cow position:
               
chr16:48613468-48613256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
178, 109
               

               
Conread position:
               
123-339
               

               
Cow position:
               
chr16:820259-820475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
123-399
               

               
Cow position:
               
chr16:7136336-7136058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
124-295
               

               
Cow position:
               
chr16:1220168-1220000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
124-300
               

               
Cow position:
               
chr16:14568479-14568308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 117
               

               
Conread position:
               
124-300
               

               
Cow position:
               
chr16:48917483-48917658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
124-304
               

               
Cow position:
               
chr16:15023621-15023446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
177, 150
               

               
Conread position:
               
124-308
               

               
Cow position:
               
chr16:424803-424617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 75
               

               
Conread position:
               
124-315
               

               
Cow position:
               
chr16:34753950-34753754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
124-317
               

               
Cow position:
               
chr16:43758636-43758445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
177, 149
               

               
Conread position:
               
124-318
               

               
Cow position:
               
chr16:43308551-43308363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
177, 75
               

               
Conread position:
               
124-321
               

               
Cow position:
               
chr16:28444480-28444282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
124-322
               

               
Cow position:
               
chr16:42078837-42078641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr16:5360260-5360060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr16:5382188-5382393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr16:9615207-9615008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
177, 34
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr16:42539578-42539376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr16:44144398-44144599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
124-324
               

               
Cow position:
               
chr16:24674668-24674465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 187
               

               
Conread position:
               
124-325
               

               
Cow position:
               
chr16:45122045-45122252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
124-326
               

               
Cow position:
               
chr16:17180169-17180369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
124-327
               

               
Cow position:
               
chr16:8469687-8469891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
124-328
               

               
Cow position:
               
chr16:9596380-9596576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
124-330
               

               
Cow position:
               
chr16:38663700-38663494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 40
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr16:15927245-15927453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr16:16842518-16842313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
178, 115
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr16:18470470-18470677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr16:45193799-45193593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 107
               

               
Conread position:
               
124-332
               

               
Cow position:
               
chr16:39695473-39695260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
124-333
               

               
Cow position:
               
chr16:50442558-50442771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
124-336
               

               
Cow position:
               
chr16:35297418-35297627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
177, 57
               

               
Conread position:
               
124-337
               

               
Cow position:
               
chr16:28979842-28980054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
124-351
               

               
Cow position:
               
chr16:13996186-13995963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
124-368
               

               
Cow position:
               
chr16:19053873-19053632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
161, 118
               

               
Conread position:
               
125-300
               

               
Cow position:
               
chr16:48145392-48145223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
125-315
               

               
Cow position:
               
chr16:8288936-8288752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
176, 44
               

               
Conread position:
               
125-331
               

               
Cow position:
               
chr16:44428894-44429094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
176, 107
               

               
Conread position:
               
126-304
               

               
Cow position:
               
chr16:33646027-33646203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 108
               

               
Conread position:
               
126-304
               

               
Cow position:
               
chr16:34205052-34204877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 115
               

               
Conread position:
               
126-308
               

               
Cow position:
               
chr16:31561767-31561946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
175, 109
               

               
Conread position:
               
126-311
               

               
Cow position:
               
chr16:20205473-20205659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
126-312
               

               
Cow position:
               
chr16:48095753-48095573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
175, 107
               

               
Conread position:
               
126-314
               

               
Cow position:
               
chr16:238280-238464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr16:11083010-11083196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
175, 64
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr16:18757827-18757635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr16:46552806-46552993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
175, 104
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr16:48956810-48956999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 114
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr16:52275117-52274935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
175, 92
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr16:12324467-12324655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
175, 109
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr16:3304035-3304238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 147
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr16:11660449-11660268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
175, 97
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr16:17135048-17134855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
175, 117
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr16:52170067-52170259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 114
               

               
Conread position:
               
126-328
               

               
Cow position:
               
chr16:48398242-48398048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
175, 100
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr16:45677990-45678189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
175, 98
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr16:11584393-11584192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
173, 109
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr16:30305800-30305602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr16:33704819-33705017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr16:31149390-31149592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
176, 57
               

               
Conread position:
               
126-335
               

               
Cow position:
               
chr16:33198425-33198213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
126-338
               

               
Cow position:
               
chr16:16597569-16597781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
175, 98
               

               
Conread position:
               
126-339
               

               
Cow position:
               
chr16:7418391-7418597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
174, 33
               

               
Conread position:
               
126-358
               

               
Cow position:
               
chr16:18205971-18206199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
175, 104
               

               
Conread position:
               
126-392
               

               
Cow position:
               
chr16:46433315-46433041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
127-304
               

               
Cow position:
               
chr16:42200912-42201093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
127-305
               

               
Cow position:
               
chr16:12010108-12010287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr16:15945243-15945060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 121
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr16:16025449-16025636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
127-317
               

               
Cow position:
               
chr16:13698528-13698719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
127-320
               

               
Cow position:
               
chr16:53451718-53451910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
170, 103
               

               
Conread position:
               
127-322
               

               
Cow position:
               
chr16:8738078-8738274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
175, 97
               

               
Conread position:
               
127-323
               

               
Cow position:
               
chr16:31117602-31117412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr16:10011836-10011633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
127-335
               

               
Cow position:
               
chr16:31484649-31484448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
128-329
               

               
Cow position:
               
chr16:13295614-13295818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
128-329
               

               
Cow position:
               
chr16:31575158-31575359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
174, 191
               

               
Conread position:
               
128-333
               

               
Cow position:
               
chr16:33290398-33290604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
131-308
               

               
Cow position:
               
chr16:51143816-51143991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 104
               

               
Conread position:
               
131-317
               

               
Cow position:
               
chr16:9987051-9986855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
131-319
               

               
Cow position:
               
chr16:45348402-45348593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
131-329
               

               
Cow position:
               
chr16:56126763-56126566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
133-332
               

               
Cow position:
               
chr16:21442592-21442393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
97, 62
               

               
Conread position:
               
134-333
               

               
Cow position:
               
chr16:1582906-1582711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 107
               

               
Conread position:
               
135-329
               

               
Cow position:
               
chr16:33302205-33302398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
139-329
               

               
Cow position:
               
chr16:45294569-45294758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
140-278
               

               
Cow position:
               
chr16:45610011-45610149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-300
               

               
Cow position:
               
chr16:11654068-11654227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chr16:22850351-22850516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chr16:31241267-31241104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
161, 11
               

               
Conread position:
               
140-321
               

               
Cow position:
               
chr16:33717079-33717261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr16:6016354-6016177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
161, 82
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr16:9472617-9472801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr16:18243763-18243944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr16:28233279-28233098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
161, 146
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr16:37064843-37064650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
140-324
               

               
Cow position:
               
chr16:12819021-12819207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chr16:56595364-56595176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
161, 180
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr16:8711165-8710976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
107, 143
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr16:50943412-50943605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 60
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr16:336562-336370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr16:12493089-12492896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr16:18573028-18572837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
161, 56
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr16:38581028-38581224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr16:47304099-47303895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
140-337
               

               
Cow position:
               
chr16:6026972-6026778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
144-311
               

               
Cow position:
               
chr16:4192404-4192237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-327
               

               
Cow position:
               
chr16:11019479-11019302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
150-330
               

               
Cow position:
               
chr16:18668996-18669176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
151, 92
               

               
Conread position:
               
151-366
               

               
Cow position:
               
chr16:13224669-13224888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 174
               

               
Conread position:
               
152-331
               

               
Cow position:
               
chr16:43712495-43712674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
149, 167
               

               
Conread position:
               
153-300
               

               
Cow position:
               
chr16:53004156-53004010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr16:46184196-46184358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr16:24128744-24128907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr16:32426685-32426525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr16:45700446-45700280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr16:50906516-50906678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 89
               

               
Conread position:
               
153-317
               

               
Cow position:
               
chr16:56850386-56850549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
149, 71
               

               
Conread position:
               
153-323
               

               
Cow position:
               
chr16:10173233-10173067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
153-329
               

               
Cow position:
               
chr16:21002336-21002159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
153-329
               

               
Cow position:
               
chr16:23718936-23718762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
153-330
               

               
Cow position:
               
chr16:21044335-21044513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
153-331
               

               
Cow position:
               
chr16:50189338-50189161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
153-332
               

               
Cow position:
               
chr16:956848-956669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 101
               

               
Conread position:
               
153-340
               

               
Cow position:
               
chr16:13796307-13796491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 129
               

               
Conread position:
               
155-316
               

               
Cow position:
               
chr16:56893574-56893415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
155-323
               

               
Cow position:
               
chr16:12458043-12457877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
155-331
               

               
Cow position:
               
chr16:56626975-56627146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 79
               

               
Conread position:
               
156-278
               

               
Cow position:
               
chr16:22927564-22927683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
156-279
               

               
Cow position:
               
chr16:43185338-43185461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-298
               

               
Cow position:
               
chr16:23187586-23187734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr16:15949466-15949316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
156-312
               

               
Cow position:
               
chr16:14242411-14242564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
156-312
               

               
Cow position:
               
chr16:42977509-42977670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
156-314
               

               
Cow position:
               
chr16:7442059-7441902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr16:49734104-49733945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
156-317
               

               
Cow position:
               
chr16:5243128-5243289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 152
               

               
Conread position:
               
156-320
               

               
Cow position:
               
chr16:51598571-51598409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 84
               

               
Conread position:
               
156-321
               

               
Cow position:
               
chr16:1548836-1548676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
156-321
               

               
Cow position:
               
chr16:20743272-20743111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
144, 99
               

               
Conread position:
               
156-321
               

               
Cow position:
               
chr16:49336265-49336425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 83
               

               
Conread position:
               
156-321
               

               
Cow position:
               
chr16:50569305-50569465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 78
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr16:9097065-9097232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr16:44138451-44138284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr16:27327083-27326915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr16:30581077-30580912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr16:56265542-56265710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-324
               

               
Cow position:
               
chr16:8206042-8205874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
156-326
               

               
Cow position:
               
chr16:20614540-20614706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr16:3047298-3047132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
125, 52
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr16:4275698-4275532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 52
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr16:45278578-45278749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
139, 41
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr16:10032904-10033078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr16:14376821-14376993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
145, 77
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr16:5396775-5396603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
145, 87
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr16:31011369-31011538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr16:52325557-52325383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr16:29311565-29311742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr16:8090490-8090313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr16:9560453-9560268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr16:30646554-30646723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 78
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr16:33073839-33073669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
145, 25
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr16:42107671-42107847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
146, 130
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr16:3938969-3938795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr16:15252010-15251844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr16:20921189-20921369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 90
               

               
Conread position:
               
156-334
               

               
Cow position:
               
chr16:8522347-8522171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
156-335
               

               
Cow position:
               
chr16:14841401-14841583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
156-336
               

               
Cow position:
               
chr16:3049112-3048933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
145, 82
               

               
Conread position:
               
156-336
               

               
Cow position:
               
chr16:4277512-4277333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
145, 82
               

               
Conread position:
               
156-338
               

               
Cow position:
               
chr16:23811162-23811353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr16:8810052-8809873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
156-340
               

               
Cow position:
               
chr16:7910761-7910576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 100
               

               
Conread position:
               
156-340
               

               
Cow position:
               
chr16:23822985-23822805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
156-340
               

               
Cow position:
               
chr16:50078717-50078531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
156-348
               

               
Cow position:
               
chr16:7665679-7665872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-380
               

               
Cow position:
               
chr16:14343621-14343846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 196
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr16:51610792-51610547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 161
               

               
Conread position:
               
157-307
               

               
Cow position:
               
chr16:27759563-27759409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
157-307
               

               
Cow position:
               
chr16:47662771-47662917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 124
               

               
Conread position:
               
157-319
               

               
Cow position:
               
chr16:11775951-11775794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 81
               

               
Conread position:
               
157-319
               

               
Cow position:
               
chr16:45943723-45943563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
157-323
               

               
Cow position:
               
chr16:25419211-25419044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
157-324
               

               
Cow position:
               
chr16:5654542-5654710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
157-340
               

               
Cow position:
               
chr16:48455722-48455897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
158-312
               

               
Cow position:
               
chr16:37154260-37154420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
158-316
               

               
Cow position:
               
chr16:24672819-24672660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
158-321
               

               
Cow position:
               
chr16:4615101-4615264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 161
               

               
Conread position:
               
158-322
               

               
Cow position:
               
chr16:19282049-19282215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 104
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr16:11365016-11364850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
158-326
               

               
Cow position:
               
chr16:23564176-23564349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
158-327
               

               
Cow position:
               
chr16:17665697-17665866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 105
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr16:14954-14784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 24
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr16:6343865-6343692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr16:47274683-47274511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr16:16368683-16368521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr16:17617319-17617147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 151
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr16:30561415-30561578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
146, 25
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr16:31701648-31701811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
146, 25
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr16:10140382-10140556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
143, 123
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr16:47834971-47835133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr16:40446305-40446485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
158-337
               

               
Cow position:
               
chr16:51531368-51531187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
158-356
               

               
Cow position:
               
chr16:34998582-34998382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
158-357
               

               
Cow position:
               
chr16:22984797-22984991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 82
               

               
Conread position:
               
159-316
               

               
Cow position:
               
chr16:13306827-13306671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 83
               

               
Conread position:
               
159-316
               

               
Cow position:
               
chr16:55965228-55965386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
159-319
               

               
Cow position:
               
chr16:24138707-24138548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
159-322
               

               
Cow position:
               
chr16:23515721-23515560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
159-328
               

               
Cow position:
               
chr16:34153527-34153357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 126
               

               
Conread position:
               
159-329
               

               
Cow position:
               
chr16:8953638-8953459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
159-339
               

               
Cow position:
               
chr16:21450892-21451074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
159-339
               

               
Cow position:
               
chr16:42992261-42992445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
160-322
               

               
Cow position:
               
chr16:41696054-41696212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
141, 79
               

               
Conread position:
               
160-330
               

               
Cow position:
               
chr16:27117350-27117520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 125
               

               
Conread position:
               
160-330
               

               
Cow position:
               
chr16:33285357-33285180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
160-331
               

               
Cow position:
               
chr16:23681408-23681575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
160-355
               

               
Cow position:
               
chr16:51393345-51393151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
163-297
               

               
Cow position:
               
chr16:50678228-50678090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
163-318
               

               
Cow position:
               
chr16:16163657-16163511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 71
               

               
Conread position:
               
163-323
               

               
Cow position:
               
chr16:8231314-8231161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
163-328
               

               
Cow position:
               
chr16:13053598-13053761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 79
               

               
Conread position:
               
163-331
               

               
Cow position:
               
chr16:8795670-8795493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
163-333
               

               
Cow position:
               
chr16:8083881-8083710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 95
               

               
Conread position:
               
163-333
               

               
Cow position:
               
chr16:23881162-23880996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
163-334
               

               
Cow position:
               
chr16:18429636-18429806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
163-339
               

               
Cow position:
               
chr16:30055053-30054879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
138, 61
               

               
Conread position:
               
163-342
               

               
Cow position:
               
chr16:12251068-12251249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
164-331
               

               
Cow position:
               
chr16:21974914-21974743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
164-334
               

               
Cow position:
               
chr16:16232106-16232277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
164-356
               

               
Cow position:
               
chr16:14754273-14754087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
166-315
               

               
Cow position:
               
chr16:12275741-12275592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
166-316
               

               
Cow position:
               
chr16:2751026-2751174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
166-323
               

               
Cow position:
               
chr16:31558953-31559111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
166-328
               

               
Cow position:
               
chr16:51246986-51247157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
166-340
               

               
Cow position:
               
chr16:26842798-26842975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
167-331
               

               
Cow position:
               
chr16:12102587-12102749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
168-330
               

               
Cow position:
               
chr16:4911392-4911237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 66
               

               
Conread position:
               
169-311
               

               
Cow position:
               
chr16:41653028-41653167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
171-400
               

               
Cow position:
               
chr16:7727986-7727751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
172-329
               

               
Cow position:
               
chr16:41095787-41095943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 59
               

               
Conread position:
               
173-328
               

               
Cow position:
               
chr16:23033886-23034041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 80
               

               
Conread position:
               
181-323
               

               
Cow position:
               
chr16:19756710-19756573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
181-327
               

               
Cow position:
               
chr16:1856668-1856815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
181-370
               

               
Cow position:
               
chr16:12096788-12096596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
187-316
               

               
Cow position:
               
chr16:48875839-48875703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
187-317
               

               
Cow position:
               
chr16:39398898-39398767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
187-323
               

               
Cow position:
               
chr16:30368753-30368618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
187-326
               

               
Cow position:
               
chr16:23053896-23054037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
189-323
               

               
Cow position:
               
chr16:50085416-50085285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 45
               

               
Conread position:
               
190-333
               

               
Cow position:
               
chr16:39646689-39646829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
192-323
               

               
Cow position:
               
chr16:15957403-15957272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
194-328
               

               
Cow position:
               
chr16:12331172-12331307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
199-322
               

               
Cow position:
               
chr16:19720734-19720610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               
Show alignments to all cow chromosomes.