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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8047J22.3
        

               
Conread position:
               
89-328
               

               
Cow position:
               
chr2:50821245-50821000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
90-316
               

               
Cow position:
               
chr2:28356323-28356551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
104-315
               

               
Cow position:
               
chr2:45522046-45521833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
104-323
               

               
Cow position:
               
chr2:21171593-21171811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
106-316
               

               
Cow position:
               
chr2:38953817-38954033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 12
               

               
Conread position:
               
106-330
               

               
Cow position:
               
chr2:305723-305503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
195, 175
               

               
Conread position:
               
106-330
               

               
Cow position:
               
chr2:44620580-44620802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
193, 12
               

               
Conread position:
               
106-331
               

               
Cow position:
               
chr2:37791502-37791277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
107-334
               

               
Cow position:
               
chr2:65554809-65554585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
194, 10
               

               
Conread position:
               
108-328
               

               
Cow position:
               
chr2:28820360-28820582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
108-331
               

               
Cow position:
               
chr2:66403935-66403713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
186, 9
               

               
Conread position:
               
108-333
               

               
Cow position:
               
chr2:12682666-12682441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
194, 9
               

               
Conread position:
               
108-339
               

               
Cow position:
               
chr2:8843833-8843602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
135, 9
               

               
Conread position:
               
109-300
               

               
Cow position:
               
chr2:10319958-10319768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
109-307
               

               
Cow position:
               
chr2:49717091-49716895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
109-307
               

               
Cow position:
               
chr2:72527957-72528153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr2:70847265-70847071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
190, 8
               

               
Conread position:
               
109-320
               

               
Cow position:
               
chr2:46204513-46204725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr2:33471991-33471790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr2:39334664-39334451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr2:52345967-52345755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr2:65587153-65587363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr2:76313871-76313659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr2:79837729-79837514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-325
               

               
Cow position:
               
chr2:19500087-19499872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-325
               

               
Cow position:
               
chr2:37973333-37973116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
109-325
               

               
Cow position:
               
chr2:80848080-80848292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-326
               

               
Cow position:
               
chr2:54700453-54700669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-329
               

               
Cow position:
               
chr2:16487984-16488200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
109-329
               

               
Cow position:
               
chr2:31355694-31355913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-330
               

               
Cow position:
               
chr2:32988562-32988786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr2:14826273-14826494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr2:39566697-39566481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr2:59180071-59180288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr2:38886643-38886426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
172, 8
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr2:43131092-43131315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 8
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr2:49428378-49428602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
111, 8
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr2:82957675-82957897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-334
               

               
Cow position:
               
chr2:14218648-14218872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr2:13354673-13354900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 8
               

               
Conread position:
               
109-336
               

               
Cow position:
               
chr2:16839633-16839857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 8
               

               
Conread position:
               
109-338
               

               
Cow position:
               
chr2:32048477-32048701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
109-355
               

               
Cow position:
               
chr2:72315815-72315573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
110-322
               

               
Cow position:
               
chr2:7478945-7478727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
112-327
               

               
Cow position:
               
chr2:19017450-19017666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
188, 12
               

               
Conread position:
               
112-331
               

               
Cow position:
               
chr2:60182029-60181814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
112-340
               

               
Cow position:
               
chr2:9062676-9062906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
189, 12
               

               
Conread position:
               
113-319
               

               
Cow position:
               
chr2:16481863-16481655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr2:5300596-5300804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
188, 11
               

               
Conread position:
               
113-333
               

               
Cow position:
               
chr2:44007419-44007643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
114-304
               

               
Cow position:
               
chr2:35043962-35044155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 26
               

               
Conread position:
               
115-333
               

               
Cow position:
               
chr2:43729463-43729240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
116-279
               

               
Cow position:
               
chr2:46014769-46014931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
116-279
               

               
Cow position:
               
chr2:62200759-62200921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
116-295
               

               
Cow position:
               
chr2:50565937-50566115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
116-304
               

               
Cow position:
               
chr2:65931968-65932156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr2:48837285-48837090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr2:67302021-67302218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr2:54968011-54968214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr2:59397050-59396844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-327
               

               
Cow position:
               
chr2:30012760-30012550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
116-327
               

               
Cow position:
               
chr2:48525539-48525324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
116-329
               

               
Cow position:
               
chr2:38837514-38837301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-329
               

               
Cow position:
               
chr2:46312443-46312648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr2:2827746-2827956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
183, 8
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr2:9726095-9725885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 8
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr2:13369657-13369871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr2:29041900-29042111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr2:40411172-40410961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr2:13468218-13468432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr2:19212052-19211846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr2:42970117-42970324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr2:68292771-68292987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
179, 8
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr2:16667940-16668156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr2:7194214-7194430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-340
               

               
Cow position:
               
chr2:20947375-20947591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
116-340
               

               
Cow position:
               
chr2:55496292-55496070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-353
               

               
Cow position:
               
chr2:76562109-76562359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
117-304
               

               
Cow position:
               
chr2:78360413-78360598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
107, 7
               

               
Conread position:
               
117-329
               

               
Cow position:
               
chr2:3128072-3127860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
117-330
               

               
Cow position:
               
chr2:23712875-23713090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
5, 98
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr2:30954595-30954378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 176
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr2:36077355-36077575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr2:26361757-26361975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr2:29395007-29394789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 203
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr2:41422800-41423008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
117-371
               

               
Cow position:
               
chr2:25922414-25922664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
119-300
               

               
Cow position:
               
chr2:35948674-35948498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
119-331
               

               
Cow position:
               
chr2:35934885-35935105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
119-331
               

               
Cow position:
               
chr2:39514041-39514254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
119-363
               

               
Cow position:
               
chr2:47065113-47065359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
120-331
               

               
Cow position:
               
chr2:12186635-12186844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 134
               

               
Conread position:
               
121-316
               

               
Cow position:
               
chr2:32264385-32264194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
180, 103
               

               
Conread position:
               
122-300
               

               
Cow position:
               
chr2:45589647-45589470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
122-314
               

               
Cow position:
               
chr2:19164959-19164771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
179, 112
               

               
Conread position:
               
122-316
               

               
Cow position:
               
chr2:65928832-65928640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
179, 17
               

               
Conread position:
               
122-323
               

               
Cow position:
               
chr2:11573810-11574021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
122-328
               

               
Cow position:
               
chr2:21327223-21327422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
159, 20
               

               
Conread position:
               
123-264
               

               
Cow position:
               
chr2:46300620-46300763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
123-304
               

               
Cow position:
               
chr2:16669477-16669658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
178, 90
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr2:41452242-41452433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
178, 115
               

               
Conread position:
               
123-318
               

               
Cow position:
               
chr2:31783939-31784130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
123-321
               

               
Cow position:
               
chr2:46164491-46164297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr2:3739836-3739635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr2:14710111-14709920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
178, 112
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr2:42183381-42183572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
179, 117
               

               
Conread position:
               
123-325
               

               
Cow position:
               
chr2:41145324-41145527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
123-326
               

               
Cow position:
               
chr2:64323247-64323447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr2:40257403-40257206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
176, 118
               

               
Conread position:
               
123-328
               

               
Cow position:
               
chr2:19137881-19137679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
178, 111
               

               
Conread position:
               
123-329
               

               
Cow position:
               
chr2:36117258-36117461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
186, 141
               

               
Conread position:
               
123-330
               

               
Cow position:
               
chr2:37652257-37652471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
123-331
               

               
Cow position:
               
chr2:79949-79746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
178, 107
               

               
Conread position:
               
123-331
               

               
Cow position:
               
chr2:44931253-44931044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 164
               

               
Conread position:
               
123-331
               

               
Cow position:
               
chr2:60091424-60091221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
178, 90
               

               
Conread position:
               
123-332
               

               
Cow position:
               
chr2:10505604-10505396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
123-332
               

               
Cow position:
               
chr2:64465769-64465564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
123-337
               

               
Cow position:
               
chr2:62743999-62743786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
123-346
               

               
Cow position:
               
chr2:9063283-9063496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
123-381
               

               
Cow position:
               
chr2:67596011-67595747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
124-280
               

               
Cow position:
               
chr2:24722261-24722105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-300
               

               
Cow position:
               
chr2:1317875-1317699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-300
               

               
Cow position:
               
chr2:67386463-67386288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
124-301
               

               
Cow position:
               
chr2:37614951-37615128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-303
               

               
Cow position:
               
chr2:61480598-61480777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-304
               

               
Cow position:
               
chr2:58310697-58310878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
124-305
               

               
Cow position:
               
chr2:25283125-25283302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
177, 118
               

               
Conread position:
               
124-312
               

               
Cow position:
               
chr2:64473339-64473160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
124-316
               

               
Cow position:
               
chr2:53652861-53653053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
178, 84
               

               
Conread position:
               
124-316
               

               
Cow position:
               
chr2:54931827-54931641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
124-317
               

               
Cow position:
               
chr2:26851175-26851364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 16
               

               
Conread position:
               
124-319
               

               
Cow position:
               
chr2:11217802-11218002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
124-322
               

               
Cow position:
               
chr2:26454644-26454443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
124-322
               

               
Cow position:
               
chr2:39363012-39363216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 166
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr2:841163-841363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr2:26694617-26694817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr2:31673271-31673471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr2:42608076-42608274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
177, 109
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr2:46053480-46053682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr2:78379409-78379215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
177, 100
               

               
Conread position:
               
124-324
               

               
Cow position:
               
chr2:37347795-37347992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
177, 111
               

               
Conread position:
               
124-326
               

               
Cow position:
               
chr2:55004297-55004493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
177, 100
               

               
Conread position:
               
124-329
               

               
Cow position:
               
chr2:56350907-56350700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 197
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr2:65830327-65830122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
177, 111
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr2:67927785-67927576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr2:70826341-70826548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
178, 75
               

               
Conread position:
               
124-332
               

               
Cow position:
               
chr2:57776355-57776568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
124-333
               

               
Cow position:
               
chr2:46135232-46135442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
124-336
               

               
Cow position:
               
chr2:56738063-56738279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
124-338
               

               
Cow position:
               
chr2:15059052-15058840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
177, 57
               

               
Conread position:
               
124-341
               

               
Cow position:
               
chr2:76762226-76762443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
128, 185
               

               
Conread position:
               
124-344
               

               
Cow position:
               
chr2:15348403-15348629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
124-355
               

               
Cow position:
               
chr2:15219123-15219348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 143
               

               
Conread position:
               
124-373
               

               
Cow position:
               
chr2:2931064-2931318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 240
               

               
Conread position:
               
124-399
               

               
Cow position:
               
chr2:43990782-43991053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
177, 105
               

               
Conread position:
               
125-307
               

               
Cow position:
               
chr2:56102320-56102143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
174, 69
               

               
Conread position:
               
125-328
               

               
Cow position:
               
chr2:75637725-75637519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
126-308
               

               
Cow position:
               
chr2:44170571-44170749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
126-308
               

               
Cow position:
               
chr2:46202274-46202459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
126-311
               

               
Cow position:
               
chr2:1422363-1422547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
175, 28
               

               
Conread position:
               
126-312
               

               
Cow position:
               
chr2:28330735-28330555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr2:19494226-19494414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
175, 104
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr2:22371940-22371754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
175, 108
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr2:46351770-46351582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
175, 108
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr2:82116102-82116287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr2:85794957-85794768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
173, 59
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr2:46189084-46188895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
155, 116
               

               
Conread position:
               
126-319
               

               
Cow position:
               
chr2:1923870-1923679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 6
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr2:5604537-5604725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr2:46033347-46033540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 116
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr2:6039025-6039222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 81
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr2:44168080-44168269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr2:45499190-45498996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 111
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr2:46227471-46227672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr2:81913013-81913206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
175, 7
               

               
Conread position:
               
126-325
               

               
Cow position:
               
chr2:37619902-37619702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr2:18997731-18997929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
175, 108
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr2:37891479-37891271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 200
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr2:22042548-22042768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr2:25483060-25483260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr2:84480489-84480286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
175, 120
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr2:18243550-18243750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 114
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr2:37791105-37790899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr2:39642762-39642960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 149
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr2:41248583-41248779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 94
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr2:46161969-46162167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
175, 108
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr2:47879253-47879450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
175, 94
               

               
Conread position:
               
126-332
               

               
Cow position:
               
chr2:21410231-21410446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 205
               

               
Conread position:
               
126-332
               

               
Cow position:
               
chr2:28301217-28301419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
175, 64
               

               
Conread position:
               
126-332
               

               
Cow position:
               
chr2:51290346-51290139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
175, 162
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr2:36575747-36575950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr2:58074332-58074130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 64
               

               
Conread position:
               
127-304
               

               
Cow position:
               
chr2:59819794-59819624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
174, 87
               

               
Conread position:
               
127-324
               

               
Cow position:
               
chr2:41088086-41087898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
174, 27
               

               
Conread position:
               
127-325
               

               
Cow position:
               
chr2:12950152-12949956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 115
               

               
Conread position:
               
127-330
               

               
Cow position:
               
chr2:41462411-41462211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
174, 108
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr2:49467642-49467847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
174, 154
               

               
Conread position:
               
127-333
               

               
Cow position:
               
chr2:21949988-21950191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
172, 115
               

               
Conread position:
               
128-315
               

               
Cow position:
               
chr2:39334857-39334675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
173, 107
               

               
Conread position:
               
128-319
               

               
Cow position:
               
chr2:30161875-30161683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 157
               

               
Conread position:
               
128-330
               

               
Cow position:
               
chr2:39350475-39350276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 30
               

               
Conread position:
               
128-331
               

               
Cow position:
               
chr2:38259439-38259238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
128-331
               

               
Cow position:
               
chr2:56937694-56937891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 103
               

               
Conread position:
               
128-331
               

               
Cow position:
               
chr2:81791551-81791352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
173, 153
               

               
Conread position:
               
128-335
               

               
Cow position:
               
chr2:2491111-2490906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
171, 11
               

               
Conread position:
               
128-335
               

               
Cow position:
               
chr2:66959689-66959897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 95
               

               
Conread position:
               
129-318
               

               
Cow position:
               
chr2:46968174-46967997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
129-328
               

               
Cow position:
               
chr2:45642470-45642282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
129-340
               

               
Cow position:
               
chr2:43591358-43591150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
130-318
               

               
Cow position:
               
chr2:54654599-54654411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 103
               

               
Conread position:
               
131-323
               

               
Cow position:
               
chr2:14787703-14787896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
131-327
               

               
Cow position:
               
chr2:36963539-36963732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
170, 150
               

               
Conread position:
               
131-328
               

               
Cow position:
               
chr2:5113860-5114058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
133-312
               

               
Cow position:
               
chr2:42801057-42801231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
168, 102
               

               
Conread position:
               
133-320
               

               
Cow position:
               
chr2:37224089-37224275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
167, 97
               

               
Conread position:
               
133-322
               

               
Cow position:
               
chr2:46120623-46120439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
168, 101
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr2:44215522-44215714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
168, 48
               

               
Conread position:
               
133-337
               

               
Cow position:
               
chr2:22759959-22759753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
134-331
               

               
Cow position:
               
chr2:24393680-24393478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 190
               

               
Conread position:
               
134-343
               

               
Cow position:
               
chr2:29121903-29122111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
139-316
               

               
Cow position:
               
chr2:11435311-11435484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
162, 90
               

               
Conread position:
               
139-331
               

               
Cow position:
               
chr2:66237221-66237415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
140-299
               

               
Cow position:
               
chr2:21023485-21023326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-316
               

               
Cow position:
               
chr2:8083622-8083798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
161, 141
               

               
Conread position:
               
140-316
               

               
Cow position:
               
chr2:38042856-38043033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
140-316
               

               
Cow position:
               
chr2:80961940-80961762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chr2:29343381-29343203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-320
               

               
Cow position:
               
chr2:13000938-13001119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-321
               

               
Cow position:
               
chr2:47047731-47047548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr2:41876417-41876234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 142
               

               
Conread position:
               
140-324
               

               
Cow position:
               
chr2:73637146-73636962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
162, 142
               

               
Conread position:
               
140-329
               

               
Cow position:
               
chr2:46942326-46942141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
156, 100
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr2:21074101-21073908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr2:22677218-22677411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr2:39371443-39371626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr2:44197900-44198096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
65, 104
               

               
Conread position:
               
140-332
               

               
Cow position:
               
chr2:55662276-55662079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr2:46242557-46242365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 96
               

               
Conread position:
               
140-336
               

               
Cow position:
               
chr2:54052208-54052013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
161, 142
               

               
Conread position:
               
140-339
               

               
Cow position:
               
chr2:39479987-39480189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 142
               

               
Conread position:
               
140-340
               

               
Cow position:
               
chr2:79235547-79235750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
140-346
               

               
Cow position:
               
chr2:69579653-69579447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
162, 196
               

               
Conread position:
               
141-300
               

               
Cow position:
               
chr2:13328977-13328824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
141-317
               

               
Cow position:
               
chr2:45619369-45619196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 83
               

               
Conread position:
               
141-320
               

               
Cow position:
               
chr2:45565731-45565905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
141-326
               

               
Cow position:
               
chr2:2485871-2486054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
160, 44
               

               
Conread position:
               
142-323
               

               
Cow position:
               
chr2:58336193-58336016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
159, 5
               

               
Conread position:
               
145-323
               

               
Cow position:
               
chr2:29592508-29592330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
150, 65
               

               
Conread position:
               
148-331
               

               
Cow position:
               
chr2:41622515-41622699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
149-322
               

               
Cow position:
               
chr2:36376893-36377065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
150-323
               

               
Cow position:
               
chr2:41311237-41311069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
151, 31
               

               
Conread position:
               
150-330
               

               
Cow position:
               
chr2:65342427-65342246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
150-331
               

               
Cow position:
               
chr2:59992216-59992035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
151, 169
               

               
Conread position:
               
150-336
               

               
Cow position:
               
chr2:18236206-18236016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
131, 136
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr2:69780132-69779970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr2:67745282-67745449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
153-321
               

               
Cow position:
               
chr2:15972860-15973030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 138
               

               
Conread position:
               
153-328
               

               
Cow position:
               
chr2:16751840-16751664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
153-329
               

               
Cow position:
               
chr2:82121993-82121814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
153-330
               

               
Cow position:
               
chr2:45696964-45696791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
146, 123
               

               
Conread position:
               
153-330
               

               
Cow position:
               
chr2:58869124-58868945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
153-331
               

               
Cow position:
               
chr2:29930857-29930677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
153-331
               

               
Cow position:
               
chr2:36718095-36717920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
153-331
               

               
Cow position:
               
chr2:41651358-41651175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
153-338
               

               
Cow position:
               
chr2:11257997-11257806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 123
               

               
Conread position:
               
153-338
               

               
Cow position:
               
chr2:56021350-56021537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
153-396
               

               
Cow position:
               
chr2:50432897-50433137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
148, 83
               

               
Conread position:
               
155-316
               

               
Cow position:
               
chr2:64562898-64562737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
155-321
               

               
Cow position:
               
chr2:83273632-83273470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
147, 69
               

               
Conread position:
               
155-333
               

               
Cow position:
               
chr2:47018886-47019061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
167, 87
               

               
Conread position:
               
156-251
               

               
Cow position:
               
chr2:36017372-36017277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-268
               

               
Cow position:
               
chr2:5815977-5815865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-298
               

               
Cow position:
               
chr2:56837614-56837471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr2:1364557-1364397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr2:39095398-39095559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr2:46316912-46317073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr2:67480017-67480187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
156-317
               

               
Cow position:
               
chr2:42476188-42476033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
146, 8
               

               
Conread position:
               
156-318
               

               
Cow position:
               
chr2:46015929-46015772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
145, 79
               

               
Conread position:
               
156-318
               

               
Cow position:
               
chr2:52466410-52466249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
156-321
               

               
Cow position:
               
chr2:12873453-12873612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr2:31749927-31749760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr2:38884381-38884219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
156-322
               

               
Cow position:
               
chr2:41915387-41915222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr2:992197-992359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr2:7908859-7909023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr2:28726505-28726670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr2:38619394-38619230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr2:44022764-44022597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
145, 164
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr2:44313677-44313509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
125, 134
               

               
Conread position:
               
156-326
               

               
Cow position:
               
chr2:78116321-78116150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr2:9476392-9476227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr2:30127248-30127079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr2:38700340-38700170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr2:52484918-52484755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr2:63568752-63568920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 86
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr2:12686748-12686583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
140, 81
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr2:12952081-12952255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr2:50913974-50913805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 96
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr2:61474057-61473873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr2:2437563-2437397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr2:26574802-26574970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 85
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr2:16847223-16847398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr2:50013400-50013571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr2:55526732-55526559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 50
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr2:75227245-75227421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr2:2031969-2031795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr2:30179870-30179694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr2:36124475-36124648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 29
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr2:42897707-42897883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr2:44051350-44051523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr2:53567530-53567699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr2:55939667-55939845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr2:15734458-15734636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr2:47195003-47195184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr2:38913526-38913702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr2:50368233-50368418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 78
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr2:67047461-67047637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr2:70657230-70657411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 131
               

               
Conread position:
               
156-337
               

               
Cow position:
               
chr2:66629230-66629423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr2:74070374-74070551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr2:19320041-19320229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr2:22370904-22370718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
156-389
               

               
Cow position:
               
chr2:3773285-3773055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
157-290
               

               
Cow position:
               
chr2:80235313-80235178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
157-322
               

               
Cow position:
               
chr2:43139614-43139449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
157-322
               

               
Cow position:
               
chr2:70147955-70148121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
157-322
               

               
Cow position:
               
chr2:82609724-82609563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
157-324
               

               
Cow position:
               
chr2:13317624-13317792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
157-329
               

               
Cow position:
               
chr2:69109306-69109132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
157-331
               

               
Cow position:
               
chr2:66561998-66561821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
157-333
               

               
Cow position:
               
chr2:81480889-81481063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
144, 72
               

               
Conread position:
               
157-340
               

               
Cow position:
               
chr2:33560633-33560451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
144, 100
               

               
Conread position:
               
158-304
               

               
Cow position:
               
chr2:41459136-41459285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
158-312
               

               
Cow position:
               
chr2:74249184-74249027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
158-316
               

               
Cow position:
               
chr2:37059125-37058969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 128
               

               
Conread position:
               
158-316
               

               
Cow position:
               
chr2:45799885-45799726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
158-316
               

               
Cow position:
               
chr2:84344107-84343948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
158-321
               

               
Cow position:
               
chr2:39483527-39483691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
158-321
               

               
Cow position:
               
chr2:79687487-79687334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
158-322
               

               
Cow position:
               
chr2:17940244-17940083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
158-322
               

               
Cow position:
               
chr2:46111010-46110839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr2:485620-485784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
143, 76
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr2:80116141-80116304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr2:80882787-80882617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 75
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr2:33711945-33711768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr2:71892520-71892693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 127
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr2:86490599-86490432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr2:40508553-40508379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr2:10628492-10628318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 162
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr2:12139504-12139326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr2:15400904-15400732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr2:46521815-46521990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr2:82374480-82374652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr2:85161390-85161222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr2:6267727-6267546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr2:73650450-73650626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
158-339
               

               
Cow position:
               
chr2:21377989-21378170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
159-301
               

               
Cow position:
               
chr2:64212508-64212369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
159-317
               

               
Cow position:
               
chr2:78249781-78249940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
159-321
               

               
Cow position:
               
chr2:84754830-84754993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
159-323
               

               
Cow position:
               
chr2:22371409-22371570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
159-323
               

               
Cow position:
               
chr2:40597614-40597779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
159-330
               

               
Cow position:
               
chr2:21382808-21382634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
159-331
               

               
Cow position:
               
chr2:71622003-71621834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
139, 75
               

               
Conread position:
               
159-332
               

               
Cow position:
               
chr2:73981677-73981845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 70
               

               
Conread position:
               
159-353
               

               
Cow position:
               
chr2:19842833-19843021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
159-385
               

               
Cow position:
               
chr2:43994981-43995206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
142, 76
               

               
Conread position:
               
160-279
               

               
Cow position:
               
chr2:53575943-53575824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
160-315
               

               
Cow position:
               
chr2:21049284-21049136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 74
               

               
Conread position:
               
160-316
               

               
Cow position:
               
chr2:68328807-68328652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
141, 85
               

               
Conread position:
               
160-316
               

               
Cow position:
               
chr2:69585701-69585855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
141, 121
               

               
Conread position:
               
160-319
               

               
Cow position:
               
chr2:19191785-19191618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
160-321
               

               
Cow position:
               
chr2:44065618-44065769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 15
               

               
Conread position:
               
160-323
               

               
Cow position:
               
chr2:13341676-13341512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
160-330
               

               
Cow position:
               
chr2:73923858-73924029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
160-331
               

               
Cow position:
               
chr2:34570960-34570788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
160-338
               

               
Cow position:
               
chr2:56771462-56771282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
160-366
               

               
Cow position:
               
chr2:39663414-39663628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
162-316
               

               
Cow position:
               
chr2:1036341-1036187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 72
               

               
Conread position:
               
162-331
               

               
Cow position:
               
chr2:58070040-58070210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
163-315
               

               
Cow position:
               
chr2:51024151-51024006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
163-317
               

               
Cow position:
               
chr2:15871984-15872130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 71
               

               
Conread position:
               
163-318
               

               
Cow position:
               
chr2:58153753-58153905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 79
               

               
Conread position:
               
163-319
               

               
Cow position:
               
chr2:40488855-40489005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
138, 71
               

               
Conread position:
               
163-323
               

               
Cow position:
               
chr2:84750758-84750914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
163-325
               

               
Cow position:
               
chr2:68390783-68390942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 77
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr2:72359586-72359417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
163-331
               

               
Cow position:
               
chr2:47784833-47785003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
137, 19
               

               
Conread position:
               
163-331
               

               
Cow position:
               
chr2:70846418-70846247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
163-333
               

               
Cow position:
               
chr2:49248494-49248324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
163-333
               

               
Cow position:
               
chr2:75562056-75562223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 125
               

               
Conread position:
               
163-333
               

               
Cow position:
               
chr2:80275245-80275075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
138, 79
               

               
Conread position:
               
163-334
               

               
Cow position:
               
chr2:19058205-19058370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
163-334
               

               
Cow position:
               
chr2:81894129-81893950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 79
               

               
Conread position:
               
163-365
               

               
Cow position:
               
chr2:1410088-1409885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
164-300
               

               
Cow position:
               
chr2:81233062-81232924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
164-319
               

               
Cow position:
               
chr2:26159921-26160082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
164-322
               

               
Cow position:
               
chr2:45597030-45597184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
164-327
               

               
Cow position:
               
chr2:22166480-22166318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
164-329
               

               
Cow position:
               
chr2:70771833-70771665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
165-320
               

               
Cow position:
               
chr2:67621392-67621544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
166-319
               

               
Cow position:
               
chr2:46139372-46139529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
166-325
               

               
Cow position:
               
chr2:11656942-11657100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 74
               

               
Conread position:
               
166-329
               

               
Cow position:
               
chr2:10574512-10574344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
166-331
               

               
Cow position:
               
chr2:29508232-29508066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
166-331
               

               
Cow position:
               
chr2:43474231-43474394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
166-331
               

               
Cow position:
               
chr2:74198279-74198110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
167-314
               

               
Cow position:
               
chr2:81293880-81294027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
167-316
               

               
Cow position:
               
chr2:66027609-66027759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
169-312
               

               
Cow position:
               
chr2:62688193-62688335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
169-317
               

               
Cow position:
               
chr2:67810987-67810839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
169-318
               

               
Cow position:
               
chr2:4207513-4207367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
169-321
               

               
Cow position:
               
chr2:69003103-69003249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
132, 65
               

               
Conread position:
               
169-323
               

               
Cow position:
               
chr2:44063721-44063571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
169-331
               

               
Cow position:
               
chr2:617951-617792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
169-331
               

               
Cow position:
               
chr2:41351131-41350970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
169-334
               

               
Cow position:
               
chr2:39187426-39187589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
169-336
               

               
Cow position:
               
chr2:3728081-3728243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
170-330
               

               
Cow position:
               
chr2:80237350-80237187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
171-316
               

               
Cow position:
               
chr2:1777818-1777671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
171-321
               

               
Cow position:
               
chr2:21916679-21916528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
172-316
               

               
Cow position:
               
chr2:24271276-24271414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
172-321
               

               
Cow position:
               
chr2:84501312-84501163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 19
               

               
Conread position:
               
173-330
               

               
Cow position:
               
chr2:47165773-47165613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
175-331
               

               
Cow position:
               
chr2:68239264-68239415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
180-323
               

               
Cow position:
               
chr2:2098247-2098104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 102
               

               
Conread position:
               
181-325
               

               
Cow position:
               
chr2:8747882-8747738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
120, 127
               

               
Conread position:
               
181-353
               

               
Cow position:
               
chr2:19530834-19531007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
120, 155
               

               
Conread position:
               
183-316
               

               
Cow position:
               
chr2:82269927-82269795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
183-326
               

               
Cow position:
               
chr2:38693468-38693324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
187-327
               

               
Cow position:
               
chr2:39864496-39864638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
187-330
               

               
Cow position:
               
chr2:38662629-38662483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 135
               

               
Conread position:
               
187-331
               

               
Cow position:
               
chr2:33236754-33236608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 98
               

               
Conread position:
               
187-332
               

               
Cow position:
               
chr2:34811079-34810934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
190-336
               

               
Cow position:
               
chr2:22496232-22496089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
191-312
               

               
Cow position:
               
chr2:29974722-29974597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
193-321
               

               
Cow position:
               
chr2:39274857-39274988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
193-329
               

               
Cow position:
               
chr2:14855527-14855664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
193-336
               

               
Cow position:
               
chr2:75331749-75331605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
201-321
               

               
Cow position:
               
chr2:11163140-11163017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
206-317
               

               
Cow position:
               
chr2:23301-23193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
95, 29
               
Show alignments to all cow chromosomes.