Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047J22.3
        

               Conread position:
               79-317
               

               Cow position:
               chr3:9718311-9718073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               100-326
               

               Cow position:
               chr3:12669097-12669323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               100-332
               

               Cow position:
               chr3:15388186-15388411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               199, 20
               

               Conread position:
               107-315
               

               Cow position:
               chr3:15160490-15160691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               194, 10
               

               Conread position:
               108-323
               

               Cow position:
               chr3:30008937-30008724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               187, 9
               

               Conread position:
               108-330
               

               Cow position:
               chr3:4120395-4120180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               193, 9
               

               Conread position:
               108-331
               

               Cow position:
               chr3:45667375-45667150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               108-331
               

               Cow position:
               chr3:73335255-73335469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               192, 9
               

               Conread position:
               108-339
               

               Cow position:
               chr3:174919-175140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               193, 9
               

               Conread position:
               108-342
               

               Cow position:
               chr3:23203260-23203031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               109-300
               

               Cow position:
               chr3:7566445-7566263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               109-300
               

               Cow position:
               chr3:11987301-11987486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               109-304
               

               Cow position:
               chr3:66900761-66900564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               129, 8
               

               Conread position:
               109-308
               

               Cow position:
               chr3:12978645-12978448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               109-316
               

               Cow position:
               chr3:22889045-22888839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               115, 8
               

               Conread position:
               109-321
               

               Cow position:
               chr3:55970479-55970695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               115, 8
               

               Conread position:
               109-323
               

               Cow position:
               chr3:55094258-55094049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               109-324
               

               Cow position:
               chr3:57754504-57754293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               193, 8
               

               Conread position:
               109-326
               

               Cow position:
               chr3:2675001-2675217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               187, 8
               

               Conread position:
               109-326
               

               Cow position:
               chr3:54373888-54373672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               195, 8
               

               Conread position:
               109-327
               

               Cow position:
               chr3:5703150-5703361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:1830601-1830384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               109-331
               

               Cow position:
               chr3:15954113-15953891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               193, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:15973538-15973760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               115, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:35624573-35624351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               193, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:46792357-46792575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               193, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:51033338-51033563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               117, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:53910081-53910296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:66631380-66631154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               110, 8
               

               Conread position:
               109-331
               

               Cow position:
               chr3:72473887-72474113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               109-335
               

               Cow position:
               chr3:83699896-83699677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               109-339
               

               Cow position:
               chr3:31309382-31309157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               109-340
               

               Cow position:
               chr3:59040541-59040771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               109-344
               

               Cow position:
               chr3:77188410-77188643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               109-353
               

               Cow position:
               chr3:23920457-23920213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               192, 8
               

               Conread position:
               110-333
               

               Cow position:
               chr3:82195457-82195676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               5, 15
               

               Conread position:
               112-358
               

               Cow position:
               chr3:58101653-58101892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               116, 12
               

               Conread position:
               113-322
               

               Cow position:
               chr3:75966806-75966601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               92, 11
               

               Conread position:
               113-331
               

               Cow position:
               chr3:51150103-51150320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               117, 13
               

               Conread position:
               113-331
               

               Cow position:
               chr3:56949113-56948905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               189, 11
               

               Conread position:
               114-316
               

               Cow position:
               chr3:76267999-76267798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               187, 10
               

               Conread position:
               114-335
               

               Cow position:
               chr3:34871543-34871763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               187, 10
               

               Conread position:
               116-300
               

               Cow position:
               chr3:1890131-1889948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               163, 7
               

               Conread position:
               116-300
               

               Cow position:
               chr3:11640711-11640894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               116-304
               

               Cow position:
               chr3:40145442-40145630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               184, 8
               

               Conread position:
               116-307
               

               Cow position:
               chr3:49679110-49679300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               163, 7
               

               Conread position:
               116-313
               

               Cow position:
               chr3:20021247-20021440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               185, 10
               

               Conread position:
               116-315
               

               Cow position:
               chr3:16333775-16333979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               94, 8
               

               Conread position:
               116-317
               

               Cow position:
               chr3:37041397-37041592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               185, 7
               

               Conread position:
               116-317
               

               Cow position:
               chr3:49996745-49996541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               116-322
               

               Cow position:
               chr3:20841895-20841698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               183, 7
               

               Conread position:
               116-323
               

               Cow position:
               chr3:32317853-32317647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               186, 8
               

               Conread position:
               116-323
               

               Cow position:
               chr3:43233484-43233686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               185, 8
               

               Conread position:
               116-323
               

               Cow position:
               chr3:48241596-48241788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               116-323
               

               Cow position:
               chr3:54100748-54100531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               109, 7
               

               Conread position:
               116-323
               

               Cow position:
               chr3:69144671-69144878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               186, 8
               

               Conread position:
               116-323
               

               Cow position:
               chr3:71231374-71231579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               116-325
               

               Cow position:
               chr3:51578345-51578137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               116-326
               

               Cow position:
               chr3:8814135-8813920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               116, 8
               

               Conread position:
               116-326
               

               Cow position:
               chr3:81666777-81666981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               185, 8
               

               Conread position:
               116-327
               

               Cow position:
               chr3:22221306-22221511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               156, 8
               

               Conread position:
               116-327
               

               Cow position:
               chr3:71238132-71238335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               184, 7
               

               Conread position:
               116-327
               

               Cow position:
               chr3:84807350-84807143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               116-329
               

               Cow position:
               chr3:56678373-56678162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               116-330
               

               Cow position:
               chr3:10841790-10842005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               116-330
               

               Cow position:
               chr3:21867060-21866848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               165, 8
               

               Conread position:
               116-331
               

               Cow position:
               chr3:53270808-53271022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               183, 7
               

               Conread position:
               116-331
               

               Cow position:
               chr3:59649235-59649443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               116-331
               

               Cow position:
               chr3:68587001-68587209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               8, 14
               

               Conread position:
               116-332
               

               Cow position:
               chr3:76269870-76270079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               182, 10
               

               Conread position:
               116-333
               

               Cow position:
               chr3:55819736-55819940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               185, 8
               

               Conread position:
               116-333
               

               Cow position:
               chr3:63316110-63316320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               185, 7
               

               Conread position:
               116-338
               

               Cow position:
               chr3:27976546-27976326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               147, 8
               

               Conread position:
               116-346
               

               Cow position:
               chr3:1011464-1011695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               117-251
               

               Cow position:
               chr3:59621669-59621536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               117-293
               

               Cow position:
               chr3:72391061-72391238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               117-304
               

               Cow position:
               chr3:19793611-19793427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               185, 7
               

               Conread position:
               117-316
               

               Cow position:
               chr3:985993-986190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               184, 7
               

               Conread position:
               117-316
               

               Cow position:
               chr3:2506501-2506300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 74
               

               Conread position:
               117-316
               

               Cow position:
               chr3:12178034-12178236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               117-316
               

               Cow position:
               chr3:35074857-35075047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               184, 7
               

               Conread position:
               117-316
               

               Cow position:
               chr3:59268350-59268549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               184, 6
               

               Conread position:
               117-325
               

               Cow position:
               chr3:77171292-77171501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               5, 203
               

               Conread position:
               117-327
               

               Cow position:
               chr3:75050640-75050437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 48
               

               Conread position:
               117-328
               

               Cow position:
               chr3:14552854-14553059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               184, 7
               

               Conread position:
               117-328
               

               Cow position:
               chr3:17456287-17456080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               133, 15
               

               Conread position:
               117-328
               

               Cow position:
               chr3:54067774-54067982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 16
               

               Conread position:
               117-329
               

               Cow position:
               chr3:59947642-59947856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               117-331
               

               Cow position:
               chr3:26338044-26337826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               117-331
               

               Cow position:
               chr3:30180063-30180275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 124
               

               Conread position:
               119-300
               

               Cow position:
               chr3:70756662-70756481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               162, 166
               

               Conread position:
               120-298
               

               Cow position:
               chr3:70431411-70431590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               120-322
               

               Cow position:
               chr3:28904951-28905154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               181, 0
               

               Conread position:
               121-320
               

               Cow position:
               chr3:69205003-69205195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               180, 11
               

               Conread position:
               121-321
               

               Cow position:
               chr3:11023426-11023634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               121-323
               

               Cow position:
               chr3:53266459-53266660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               174, 160
               

               Conread position:
               121-343
               

               Cow position:
               chr3:80910578-80910800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               160, 7
               

               Conread position:
               122-319
               

               Cow position:
               chr3:52845539-52845733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               180, 118
               

               Conread position:
               122-326
               

               Cow position:
               chr3:76155970-76156172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               179, 109
               

               Conread position:
               123-297
               

               Cow position:
               chr3:69416797-69416623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               123-300
               

               Cow position:
               chr3:2483988-2484160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               153, 117
               

               Conread position:
               123-314
               

               Cow position:
               chr3:78093405-78093220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               178, 102
               

               Conread position:
               123-315
               

               Cow position:
               chr3:27286502-27286689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               179, 117
               

               Conread position:
               123-322
               

               Cow position:
               chr3:3556529-3556729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               123-322
               

               Cow position:
               chr3:65969151-65969355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 68
               

               Conread position:
               123-323
               

               Cow position:
               chr3:41366726-41366518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               123-326
               

               Cow position:
               chr3:11254184-11253979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               123-327
               

               Cow position:
               chr3:28902775-28902574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               178, 91
               

               Conread position:
               123-329
               

               Cow position:
               chr3:7763640-7763845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               178, 43
               

               Conread position:
               123-329
               

               Cow position:
               chr3:24468399-24468196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               178, 6
               

               Conread position:
               123-329
               

               Cow position:
               chr3:38035606-38035400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               103, 75
               

               Conread position:
               123-330
               

               Cow position:
               chr3:3656498-3656704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               96, 164
               

               Conread position:
               123-330
               

               Cow position:
               chr3:38248635-38248845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               123-330
               

               Cow position:
               chr3:45743889-45744100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               123-331
               

               Cow position:
               chr3:50768663-50768869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               178, 107
               

               Conread position:
               123-331
               

               Cow position:
               chr3:51609202-51608994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               178, 98
               

               Conread position:
               123-331
               

               Cow position:
               chr3:54050047-54049839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               171, 102
               

               Conread position:
               123-333
               

               Cow position:
               chr3:11229381-11229179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               178, 106
               

               Conread position:
               123-334
               

               Cow position:
               chr3:43389144-43388933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               178, 196
               

               Conread position:
               123-339
               

               Cow position:
               chr3:12705559-12705346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               178, 97
               

               Conread position:
               123-341
               

               Cow position:
               chr3:59317686-59317905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               105, 75
               

               Conread position:
               123-369
               

               Cow position:
               chr3:24516227-24515972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               124-248
               

               Cow position:
               chr3:57760483-57760607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               124-307
               

               Cow position:
               chr3:62312781-62312964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               157, 41
               

               Conread position:
               124-307
               

               Cow position:
               chr3:62370040-62370223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 41
               

               Conread position:
               124-312
               

               Cow position:
               chr3:14546987-14547170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               177, 66
               

               Conread position:
               124-313
               

               Cow position:
               chr3:59035025-59035215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               124-315
               

               Cow position:
               chr3:31793899-31793707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               124-316
               

               Cow position:
               chr3:2648525-2648333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               177, 100
               

               Conread position:
               124-317
               

               Cow position:
               chr3:25735921-25735727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               124-317
               

               Cow position:
               chr3:61024038-61023845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               177, 187
               

               Conread position:
               124-317
               

               Cow position:
               chr3:83671840-83672031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               178, 89
               

               Conread position:
               124-319
               

               Cow position:
               chr3:15443743-15443548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               175, 10
               

               Conread position:
               124-322
               

               Cow position:
               chr3:59681919-59681727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               124-322
               

               Cow position:
               chr3:84928088-84928288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               124-323
               

               Cow position:
               chr3:18059687-18059886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               124-323
               

               Cow position:
               chr3:18144133-18143933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 172
               

               Conread position:
               124-323
               

               Cow position:
               chr3:47199142-47198944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               177, 142
               

               Conread position:
               124-323
               

               Cow position:
               chr3:48851985-48851785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               124-323
               

               Cow position:
               chr3:80733868-80733668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               124-323
               

               Cow position:
               chr3:83215247-83215451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               124-324
               

               Cow position:
               chr3:44959927-44960128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               124-326
               

               Cow position:
               chr3:48900347-48900143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               175, 22
               

               Conread position:
               124-326
               

               Cow position:
               chr3:56943941-56943745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               177, 110
               

               Conread position:
               124-326
               

               Cow position:
               chr3:72342230-72342434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               124-328
               

               Cow position:
               chr3:11281751-11281956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               124-328
               

               Cow position:
               chr3:84137830-84137627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               177, 119
               

               Conread position:
               124-331
               

               Cow position:
               chr3:3032394-3032599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               124-331
               

               Cow position:
               chr3:9026101-9025893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               124-331
               

               Cow position:
               chr3:21014973-21014765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               44, 158
               

               Conread position:
               124-331
               

               Cow position:
               chr3:48468158-48468367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               124-331
               

               Cow position:
               chr3:73961712-73961500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               124-331
               

               Cow position:
               chr3:76056300-76056098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               177, 116
               

               Conread position:
               124-335
               

               Cow position:
               chr3:59945109-59945319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               176, 195
               

               Conread position:
               124-336
               

               Cow position:
               chr3:26982043-26982245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               177, 87
               

               Conread position:
               124-336
               

               Cow position:
               chr3:78071807-78071598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 105
               

               Conread position:
               124-339
               

               Cow position:
               chr3:45314329-45314552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               124-343
               

               Cow position:
               chr3:6049304-6049085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               151, 100
               

               Conread position:
               124-360
               

               Cow position:
               chr3:41863610-41863842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               178, 116
               

               Conread position:
               125-323
               

               Cow position:
               chr3:59885526-59885713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               176, 39
               

               Conread position:
               125-325
               

               Cow position:
               chr3:70333979-70333785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               176, 74
               

               Conread position:
               125-334
               

               Cow position:
               chr3:19198972-19199183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               177, 70
               

               Conread position:
               125-342
               

               Cow position:
               chr3:58134700-58134483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               177, 100
               

               Conread position:
               126-299
               

               Cow position:
               chr3:84250553-84250392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               126-316
               

               Cow position:
               chr3:18686893-18687076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               175, 104
               

               Conread position:
               126-316
               

               Cow position:
               chr3:60264729-60264547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               126-316
               

               Cow position:
               chr3:73395103-73395290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               175, 109
               

               Conread position:
               126-316
               

               Cow position:
               chr3:79272586-79272401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               107, 97
               

               Conread position:
               126-317
               

               Cow position:
               chr3:7331136-7330962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               175, 28
               

               Conread position:
               126-318
               

               Cow position:
               chr3:74234173-74234358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               175, 116
               

               Conread position:
               126-321
               

               Cow position:
               chr3:44932503-44932692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               174, 51
               

               Conread position:
               126-322
               

               Cow position:
               chr3:5707226-5707029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               126-323
               

               Cow position:
               chr3:2025186-2025385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               126-323
               

               Cow position:
               chr3:64196813-64197007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               175, 114
               

               Conread position:
               126-323
               

               Cow position:
               chr3:83770718-83770916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               126-324
               

               Cow position:
               chr3:3883828-3883637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               176, 66
               

               Conread position:
               126-324
               

               Cow position:
               chr3:48483165-48483364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               111, 127
               

               Conread position:
               126-326
               

               Cow position:
               chr3:15950926-15950731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               155, 87
               

               Conread position:
               126-328
               

               Cow position:
               chr3:15153678-15153875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               176, 114
               

               Conread position:
               126-328
               

               Cow position:
               chr3:55189767-55189563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 98
               

               Conread position:
               126-329
               

               Cow position:
               chr3:22165428-22165225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               175, 33
               

               Conread position:
               126-329
               

               Cow position:
               chr3:39969876-39969674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               126-329
               

               Cow position:
               chr3:67407379-67407179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               175, 114
               

               Conread position:
               126-330
               

               Cow position:
               chr3:52608169-52608370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               172, 109
               

               Conread position:
               126-331
               

               Cow position:
               chr3:423358-423560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               175, 6
               

               Conread position:
               126-331
               

               Cow position:
               chr3:22924388-22924191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               174, 108
               

               Conread position:
               126-331
               

               Cow position:
               chr3:42434340-42434139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               176, 6
               

               Conread position:
               126-331
               

               Cow position:
               chr3:59604833-59605032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               175, 31
               

               Conread position:
               126-331
               

               Cow position:
               chr3:63860624-63860421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               126-332
               

               Cow position:
               chr3:53604759-53604553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               126-334
               

               Cow position:
               chr3:7337795-7337593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               136, 45
               

               Conread position:
               126-335
               

               Cow position:
               chr3:68156709-68156922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 162
               

               Conread position:
               126-344
               

               Cow position:
               chr3:59610731-59610515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               175, 104
               

               Conread position:
               126-346
               

               Cow position:
               chr3:59299561-59299778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               127-325
               

               Cow position:
               chr3:71474416-71474223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               175, 95
               

               Conread position:
               127-326
               

               Cow position:
               chr3:68616339-68616150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               174, 30
               

               Conread position:
               127-329
               

               Cow position:
               chr3:23105374-23105178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               170, 97
               

               Conread position:
               127-331
               

               Cow position:
               chr3:70402632-70402830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               174, 46
               

               Conread position:
               127-332
               

               Cow position:
               chr3:28884173-28883974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               127-333
               

               Cow position:
               chr3:64800562-64800355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               127-338
               

               Cow position:
               chr3:75107762-75107970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               174, 115
               

               Conread position:
               127-371
               

               Cow position:
               chr3:3316827-3316573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               128-316
               

               Cow position:
               chr3:23132180-23131993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               173, 114
               

               Conread position:
               128-316
               

               Cow position:
               chr3:54350452-54350259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               128-318
               

               Cow position:
               chr3:41510565-41510755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 115
               

               Conread position:
               128-318
               

               Cow position:
               chr3:70762131-70761946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               173, 26
               

               Conread position:
               128-320
               

               Cow position:
               chr3:54506696-54506886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               173, 105
               

               Conread position:
               128-331
               

               Cow position:
               chr3:38331623-38331420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               173, 96
               

               Conread position:
               129-317
               

               Cow position:
               chr3:55177756-55177575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               172, 113
               

               Conread position:
               129-353
               

               Cow position:
               chr3:83455161-83454946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               172, 59
               

               Conread position:
               131-330
               

               Cow position:
               chr3:24596431-24596234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               154, 102
               

               Conread position:
               131-331
               

               Cow position:
               chr3:57792760-57792963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               133-312
               

               Cow position:
               chr3:53150325-53150504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               167, 114
               

               Conread position:
               133-319
               

               Cow position:
               chr3:62789960-62789772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               133-326
               

               Cow position:
               chr3:55730475-55730281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               133-328
               

               Cow position:
               chr3:210313-210511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               133-329
               

               Cow position:
               chr3:15859385-15859194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               133-330
               

               Cow position:
               chr3:79893504-79893307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               168, 97
               

               Conread position:
               133-332
               

               Cow position:
               chr3:16752264-16752063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               105, 26
               

               Conread position:
               134-318
               

               Cow position:
               chr3:22868725-22868539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 122
               

               Conread position:
               134-328
               

               Cow position:
               chr3:17531743-17531550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               139-324
               

               Cow position:
               chr3:31361425-31361605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               162, 96
               

               Conread position:
               139-331
               

               Cow position:
               chr3:69785624-69785430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               140-300
               

               Cow position:
               chr3:83199512-83199671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               140-304
               

               Cow position:
               chr3:1028647-1028484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               161, 83
               

               Conread position:
               140-316
               

               Cow position:
               chr3:52487615-52487804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               140-316
               

               Cow position:
               chr3:78258754-78258575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               140-316
               

               Cow position:
               chr3:84174302-84174479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               140-322
               

               Cow position:
               chr3:14801745-14801925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               162, 134
               

               Conread position:
               140-323
               

               Cow position:
               chr3:15795220-15795404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               161, 74
               

               Conread position:
               140-323
               

               Cow position:
               chr3:72687869-72687685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               140-325
               

               Cow position:
               chr3:48072881-48072701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               161, 105
               

               Conread position:
               140-328
               

               Cow position:
               chr3:75907912-75908098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               42, 102
               

               Conread position:
               140-329
               

               Cow position:
               chr3:46259711-46259900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               161, 82
               

               Conread position:
               140-330
               

               Cow position:
               chr3:11027275-11027467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               140-331
               

               Cow position:
               chr3:13241076-13240883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               140-331
               

               Cow position:
               chr3:32376814-32377002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               161, 111
               

               Conread position:
               140-331
               

               Cow position:
               chr3:83934726-83934916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               161, 84
               

               Conread position:
               140-332
               

               Cow position:
               chr3:49482715-49482523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 143
               

               Conread position:
               141-321
               

               Cow position:
               chr3:45881900-45882079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               161, 107
               

               Conread position:
               142-316
               

               Cow position:
               chr3:18471304-18471478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               159, 88
               

               Conread position:
               144-317
               

               Cow position:
               chr3:9120846-9121018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 139
               

               Conread position:
               144-322
               

               Cow position:
               chr3:2392964-2392788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               144-323
               

               Cow position:
               chr3:29946392-29946568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               137, 76
               

               Conread position:
               144-330
               

               Cow position:
               chr3:37647391-37647577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               157, 175
               

               Conread position:
               145-333
               

               Cow position:
               chr3:51153051-51153235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               156, 73
               

               Conread position:
               145-334
               

               Cow position:
               chr3:13927821-13928011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               146-319
               

               Cow position:
               chr3:2636955-2637123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               147-300
               

               Cow position:
               chr3:28643419-28643569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               149-329
               

               Cow position:
               chr3:33460599-33460410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               150-329
               

               Cow position:
               chr3:4268565-4268386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               151, 74
               

               Conread position:
               150-333
               

               Cow position:
               chr3:68632748-68632566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               151-329
               

               Cow position:
               chr3:11896529-11896713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               151-330
               

               Cow position:
               chr3:31077713-31077536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               151-332
               

               Cow position:
               chr3:60370994-60371175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               150, 126
               

               Conread position:
               151-334
               

               Cow position:
               chr3:72027649-72027832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               150, 15
               

               Conread position:
               153-300
               

               Cow position:
               chr3:29891395-29891248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 132
               

               Conread position:
               153-311
               

               Cow position:
               chr3:57336788-57336948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               123, 156
               

               Conread position:
               153-315
               

               Cow position:
               chr3:7923830-7923994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               153-316
               

               Cow position:
               chr3:23735074-23734914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               148, 75
               

               Conread position:
               153-316
               

               Cow position:
               chr3:80173013-80173174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               148, 70
               

               Conread position:
               153-321
               

               Cow position:
               chr3:35883921-35883752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               153-328
               

               Cow position:
               chr3:48300447-48300272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 133
               

               Conread position:
               153-329
               

               Cow position:
               chr3:71478611-71478779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               148, 87
               

               Conread position:
               153-331
               

               Cow position:
               chr3:24220564-24220390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               148, 45
               

               Conread position:
               153-332
               

               Cow position:
               chr3:59926634-59926824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               153-333
               

               Cow position:
               chr3:58614470-58614658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               155-305
               

               Cow position:
               chr3:72255403-72255254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               140, 38
               

               Conread position:
               155-318
               

               Cow position:
               chr3:8523138-8522977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               146, 44
               

               Conread position:
               155-323
               

               Cow position:
               chr3:83705522-83705353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               155-327
               

               Cow position:
               chr3:81616436-81616264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               146, 9
               

               Conread position:
               156-279
               

               Cow position:
               chr3:6690017-6690140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-280
               

               Cow position:
               chr3:25060344-25060467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               77, 98
               

               Conread position:
               156-297
               

               Cow position:
               chr3:49733036-49732895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               156-304
               

               Cow position:
               chr3:53046646-53046495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               156-304
               

               Cow position:
               chr3:75238474-75238623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               156-307
               

               Cow position:
               chr3:67942519-67942367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 129
               

               Conread position:
               156-315
               

               Cow position:
               chr3:74515321-74515162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 90
               

               Conread position:
               156-316
               

               Cow position:
               chr3:29334397-29334236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 154
               

               Conread position:
               156-316
               

               Cow position:
               chr3:43896043-43895888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               145, 84
               

               Conread position:
               156-316
               

               Cow position:
               chr3:56754516-56754360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 29
               

               Conread position:
               156-316
               

               Cow position:
               chr3:74644574-74644735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               156-317
               

               Cow position:
               chr3:4931824-4931654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               156-317
               

               Cow position:
               chr3:25702325-25702155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               156-317
               

               Cow position:
               chr3:29234664-29234502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 136
               

               Conread position:
               156-318
               

               Cow position:
               chr3:47417555-47417391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               145, 69
               

               Conread position:
               156-319
               

               Cow position:
               chr3:2538257-2538415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               62, 68
               

               Conread position:
               156-319
               

               Cow position:
               chr3:3453596-3453760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               156-319
               

               Cow position:
               chr3:8147509-8147345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 105
               

               Conread position:
               156-321
               

               Cow position:
               chr3:35802924-35802756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               156-321
               

               Cow position:
               chr3:65058715-65058879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               140, 69
               

               Conread position:
               156-322
               

               Cow position:
               chr3:23804522-23804684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               156-322
               

               Cow position:
               chr3:57274076-57274240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               156-322
               

               Cow position:
               chr3:63069349-63069180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               156-323
               

               Cow position:
               chr3:14211966-14211804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               145, 83
               

               Conread position:
               156-323
               

               Cow position:
               chr3:55318880-55318716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               145, 54
               

               Conread position:
               156-327
               

               Cow position:
               chr3:20802614-20802454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               145, 67
               

               Conread position:
               156-327
               

               Cow position:
               chr3:44782356-44782525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               144, 85
               

               Conread position:
               156-329
               

               Cow position:
               chr3:40213017-40212847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               146, 74
               

               Conread position:
               156-329
               

               Cow position:
               chr3:83474762-83474942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               156-331
               

               Cow position:
               chr3:2016452-2016623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               145, 84
               

               Conread position:
               156-331
               

               Cow position:
               chr3:3011163-3011336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               71, 108
               

               Conread position:
               156-331
               

               Cow position:
               chr3:21694241-21694417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 108
               

               Conread position:
               156-331
               

               Cow position:
               chr3:35079491-35079314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               156-331
               

               Cow position:
               chr3:39996871-39996701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               156-331
               

               Cow position:
               chr3:53318418-53318600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               156-331
               

               Cow position:
               chr3:55106132-55105955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               156-331
               

               Cow position:
               chr3:68289693-68289872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               63, 168
               

               Conread position:
               156-331
               

               Cow position:
               chr3:68624234-68624414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               145, 90
               

               Conread position:
               156-333
               

               Cow position:
               chr3:18700094-18699912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               156-333
               

               Cow position:
               chr3:36375523-36375344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               145, 91
               

               Conread position:
               156-333
               

               Cow position:
               chr3:37851513-37851690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               156-333
               

               Cow position:
               chr3:53428900-53428726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               145, 84
               

               Conread position:
               156-333
               

               Cow position:
               chr3:64910079-64909902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 88
               

               Conread position:
               156-333
               

               Cow position:
               chr3:66885013-66884839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               71, 87
               

               Conread position:
               156-336
               

               Cow position:
               chr3:3262817-3262628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               156-336
               

               Cow position:
               chr3:14601687-14601517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               145, 78
               

               Conread position:
               156-337
               

               Cow position:
               chr3:26977551-26977732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               156-337
               

               Cow position:
               chr3:75183325-75183515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 135
               

               Conread position:
               156-338
               

               Cow position:
               chr3:79398159-79398343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               156-339
               

               Cow position:
               chr3:44594638-44594823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               156-342
               

               Cow position:
               chr3:81087623-81087435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               156-348
               

               Cow position:
               chr3:73525221-73525026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               156-373
               

               Cow position:
               chr3:7381816-7381598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               125, 107
               

               Conread position:
               157-304
               

               Cow position:
               chr3:57706739-57706589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               157-314
               

               Cow position:
               chr3:59271849-59272004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               157-316
               

               Cow position:
               chr3:42589116-42589274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               157-316
               

               Cow position:
               chr3:49787576-49787731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               144, 80
               

               Conread position:
               157-319
               

               Cow position:
               chr3:53875747-53875584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               157-323
               

               Cow position:
               chr3:82175525-82175691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               145, 31
               

               Conread position:
               157-326
               

               Cow position:
               chr3:19044748-19044583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               144, 24
               

               Conread position:
               157-326
               

               Cow position:
               chr3:62186169-62186343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               157-331
               

               Cow position:
               chr3:45211319-45211494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               157-331
               

               Cow position:
               chr3:57790631-57790797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               145, 67
               

               Conread position:
               157-332
               

               Cow position:
               chr3:35055956-35055785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               142, 49
               

               Conread position:
               157-334
               

               Cow position:
               chr3:76300789-76300969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               157-395
               

               Cow position:
               chr3:3985340-3985572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               144, 76
               

               Conread position:
               158-284
               

               Cow position:
               chr3:38783625-38783750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               158-296
               

               Cow position:
               chr3:70319786-70319647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               158-316
               

               Cow position:
               chr3:621453-621616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               158-316
               

               Cow position:
               chr3:16107348-16107200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               146, 75
               

               Conread position:
               158-316
               

               Cow position:
               chr3:59702187-59702349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               158-317
               

               Cow position:
               chr3:68303333-68303494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               158-318
               

               Cow position:
               chr3:73837700-73837541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               143, 73
               

               Conread position:
               158-320
               

               Cow position:
               chr3:82366143-82366309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               158-321
               

               Cow position:
               chr3:20911391-20911231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               143, 123
               

               Conread position:
               158-323
               

               Cow position:
               chr3:27368650-27368482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               158-323
               

               Cow position:
               chr3:48537381-48537548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               158-327
               

               Cow position:
               chr3:58527401-58527563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               143, 76
               

               Conread position:
               158-329
               

               Cow position:
               chr3:13380256-13380091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               143, 82
               

               Conread position:
               158-329
               

               Cow position:
               chr3:28897003-28896833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               143, 37
               

               Conread position:
               158-329
               

               Cow position:
               chr3:80958492-80958322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               141, 8
               

               Conread position:
               158-330
               

               Cow position:
               chr3:16710781-16710608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               105, 53
               

               Conread position:
               158-330
               

               Cow position:
               chr3:18479279-18479107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               143, 32
               

               Conread position:
               158-330
               

               Cow position:
               chr3:79105564-79105391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               158-331
               

               Cow position:
               chr3:4071752-4071579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               143, 32
               

               Conread position:
               158-331
               

               Cow position:
               chr3:9663153-9662979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               158-333
               

               Cow position:
               chr3:12090692-12090870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               158-333
               

               Cow position:
               chr3:27083024-27082850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               143, 80
               

               Conread position:
               158-333
               

               Cow position:
               chr3:83889265-83889443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               158-336
               

               Cow position:
               chr3:68648193-68648375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               158-337
               

               Cow position:
               chr3:18067151-18067325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               143, 102
               

               Conread position:
               158-338
               

               Cow position:
               chr3:42483945-42484125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               158-338
               

               Cow position:
               chr3:58558298-58558482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               158-376
               

               Cow position:
               chr3:37641345-37641568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               159-316
               

               Cow position:
               chr3:7661872-7662033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               159-316
               

               Cow position:
               chr3:53222033-53222187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 55
               

               Conread position:
               159-316
               

               Cow position:
               chr3:77098803-77098649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               142, 76
               

               Conread position:
               159-317
               

               Cow position:
               chr3:43016431-43016264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               159-318
               

               Cow position:
               chr3:6182207-6182056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               142, 76
               

               Conread position:
               159-318
               

               Cow position:
               chr3:74050682-74050529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               142, 80
               

               Conread position:
               159-320
               

               Cow position:
               chr3:17694985-17694823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               159-323
               

               Cow position:
               chr3:54903584-54903749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               159-323
               

               Cow position:
               chr3:73943854-73943690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               143, 107
               

               Conread position:
               159-330
               

               Cow position:
               chr3:49363128-49363297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               160-316
               

               Cow position:
               chr3:19585884-19586039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               139, 70
               

               Conread position:
               160-316
               

               Cow position:
               chr3:22078096-22078253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               160-323
               

               Cow position:
               chr3:22899712-22899548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               141, 70
               

               Conread position:
               160-333
               

               Cow position:
               chr3:58452068-58452236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               141, 35
               

               Conread position:
               160-347
               

               Cow position:
               chr3:21959680-21959873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 111
               

               Conread position:
               163-316
               

               Cow position:
               chr3:73925014-73924865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               138, 60
               

               Conread position:
               163-320
               

               Cow position:
               chr3:20066126-20065967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               163-323
               

               Cow position:
               chr3:70925105-70925266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               163-323
               

               Cow position:
               chr3:74127485-74127318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               163-326
               

               Cow position:
               chr3:32436659-32436823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               118, 59
               

               Conread position:
               163-328
               

               Cow position:
               chr3:58562717-58562888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               163-329
               

               Cow position:
               chr3:19900682-19900844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 18
               

               Conread position:
               163-330
               

               Cow position:
               chr3:57704357-57704521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               139, 69
               

               Conread position:
               163-332
               

               Cow position:
               chr3:44218789-44218959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               163-357
               

               Cow position:
               chr3:3275623-3275814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               138, 36
               

               Conread position:
               163-372
               

               Cow position:
               chr3:19435140-19435347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               152, 71
               

               Conread position:
               164-331
               

               Cow position:
               chr3:36412061-36411900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               164-336
               

               Cow position:
               chr3:61171344-61171173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 131
               

               Conread position:
               165-328
               

               Cow position:
               chr3:49119007-49118843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               165-354
               

               Cow position:
               chr3:69849267-69849082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               136, 59
               

               Conread position:
               166-321
               

               Cow position:
               chr3:17304944-17304790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               166-322
               

               Cow position:
               chr3:73410313-73410464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               135, 33
               

               Conread position:
               166-323
               

               Cow position:
               chr3:58010804-58010652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               134, 119
               

               Conread position:
               166-330
               

               Cow position:
               chr3:76168605-76168441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               135, 154
               

               Conread position:
               166-333
               

               Cow position:
               chr3:11607849-11608008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               167-327
               

               Cow position:
               chr3:8540535-8540688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               167-329
               

               Cow position:
               chr3:58497685-58497848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               169-300
               

               Cow position:
               chr3:6547453-6547584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               169-323
               

               Cow position:
               chr3:12621348-12621193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               169-323
               

               Cow position:
               chr3:66354708-66354863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               169-323
               

               Cow position:
               chr3:78115563-78115408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               169-342
               

               Cow position:
               chr3:27274558-27274731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               130, 71
               

               Conread position:
               171-316
               

               Cow position:
               chr3:29943888-29944035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               172-316
               

               Cow position:
               chr3:35585864-35586009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               172-317
               

               Cow position:
               chr3:8181923-8181773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               173-330
               

               Cow position:
               chr3:18301537-18301379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               175-327
               

               Cow position:
               chr3:7408471-7408624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               176-355
               

               Cow position:
               chr3:61680351-61680535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               178-316
               

               Cow position:
               chr3:72626707-72626567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               184-331
               

               Cow position:
               chr3:79316733-79316882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               186-328
               

               Cow position:
               chr3:43091138-43091276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               52, 44
               

               Conread position:
               187-316
               

               Cow position:
               chr3:76138505-76138634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 26
               

               Conread position:
               187-330
               

               Cow position:
               chr3:82121584-82121441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 37
               

               Conread position:
               187-331
               

               Cow position:
               chr3:70632192-70632338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               187-389
               

               Cow position:
               chr3:42933528-42933735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               192-336
               

               Cow position:
               chr3:79877079-79877227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               193-340
               

               Cow position:
               chr3:34392168-34392026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 47
               

               Conread position:
               194-331
               

               Cow position:
               chr3:41746451-41746310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               196-317
               

               Cow position:
               chr3:66563839-66563961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               197-326
               

               Cow position:
               chr3:44415516-44415386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               199-316
               

               Cow position:
               chr3:3887580-3887464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               199-325
               

               Cow position:
               chr3:2434678-2434553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 43
               

               Conread position:
               202-316
               

               Cow position:
               chr3:75975019-75974904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               225-393
               

               Cow position:
               chr3:68707939-68707772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 95
               

               Conread position:
               332-555
               

               Cow position:
               chr3:15720561-15720785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               113, 36
               
Show alignments to all cow chromosomes.
Conread position:	79-317
Cow position:	chr3:9718311-9718073 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	166
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	43, 22
Conread position:	100-326
Cow position:	chr3:12669097-12669323 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	163
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	17, 25
Conread position:	100-332
Cow position:	chr3:15388186-15388411 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	164
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	199, 20
Conread position:	107-315
Cow position:	chr3:15160490-15160691 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	149
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	194, 10
Conread position:	108-323
Cow position:	chr3:30008937-30008724 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	145
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	187, 9
Conread position:	108-330
Cow position:	chr3:4120395-4120180 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	156
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	193, 9
Conread position:	108-331
Cow position:	chr3:45667375-45667150 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	167
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	64, 9
Conread position:	108-339
Cow position:	chr3:174919-175140 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	162
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	193, 9
Conread position:	108-342
Cow position:	chr3:23203260-23203031 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	166
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	5, 0
Conread position:	109-300
Cow position:	chr3:7566445-7566263 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	136
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	8, 0
Conread position:	109-304
Cow position:	chr3:66900761-66900564 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	145
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	129, 8
Conread position:	109-308
Cow position:	chr3:12978645-12978448 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	142
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	192, 8
Conread position:	109-316
Cow position:	chr3:22889045-22888839 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	143
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	115, 8
Conread position:	109-321
Cow position:	chr3:55970479-55970695 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	157
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	115, 8
Conread position:	109-323
Cow position:	chr3:55094258-55094049 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	149
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	192, 8
Conread position:	109-324
Cow position:	chr3:57754504-57754293 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	152
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	193, 8
Conread position:	109-326
Cow position:	chr3:2675001-2675217 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	153
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	187, 8
Conread position:	109-327
Cow position:	chr3:5703150-5703361 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	159
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	192, 8
Conread position:	109-331
Cow position:	chr3:1830601-1830384 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	150
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	9, 0
Conread position:	109-335
Cow position:	chr3:83699896-83699677 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	158
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	192, 8