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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8047J22.3
        

               
Conread position:
               
72-323
               

               
Cow position:
               
chr6:48893936-48893683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr6:15587580-15587346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
95-316
               

               
Cow position:
               
chr6:26054882-26054661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 29
               

               
Conread position:
               
97-317
               

               
Cow position:
               
chr6:5445686-5445908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
100-331
               

               
Cow position:
               
chr6:48157363-48157138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
102-323
               

               
Cow position:
               
chr6:26638419-26638638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
126, 8
               

               
Conread position:
               
105-323
               

               
Cow position:
               
chr6:8468697-8468905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
196, 12
               

               
Conread position:
               
106-323
               

               
Cow position:
               
chr6:62724587-62724804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
195, 18
               

               
Conread position:
               
106-394
               

               
Cow position:
               
chr6:6063261-6062976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
108-300
               

               
Cow position:
               
chr6:65535136-65534946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
108-330
               

               
Cow position:
               
chr6:17313770-17313992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
108-370
               

               
Cow position:
               
chr6:32453420-32453683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
109-311
               

               
Cow position:
               
chr6:22525366-22525559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
109-319
               

               
Cow position:
               
chr6:1866766-1866973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
109-322
               

               
Cow position:
               
chr6:6201460-6201678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
140, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr6:14056434-14056222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr6:24536496-24536280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
109-326
               

               
Cow position:
               
chr6:54846243-54846025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr6:18608776-18608559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
109-330
               

               
Cow position:
               
chr6:44867507-44867294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-332
               

               
Cow position:
               
chr6:36809172-36808947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr6:3464331-3464546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 8
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr6:47648200-47647977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
109-333
               

               
Cow position:
               
chr6:55417493-55417277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
192, 14
               

               
Conread position:
               
109-337
               

               
Cow position:
               
chr6:35319098-35318873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-342
               

               
Cow position:
               
chr6:67728411-67728646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-387
               

               
Cow position:
               
chr6:43134903-43134630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 8
               

               
Conread position:
               
109-390
               

               
Cow position:
               
chr6:24110318-24110599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
192, 8
               

               
Conread position:
               
109-414
               

               
Cow position:
               
chr6:67574423-67574730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
192, 15
               

               
Conread position:
               
110-323
               

               
Cow position:
               
chr6:37827908-37827702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
110-328
               

               
Cow position:
               
chr6:54854285-54854501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
110-333
               

               
Cow position:
               
chr6:52430983-52430763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
187, 14
               

               
Conread position:
               
110-333
               

               
Cow position:
               
chr6:57115120-57115340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
111-322
               

               
Cow position:
               
chr6:13367322-13367527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
112-330
               

               
Cow position:
               
chr6:24776176-24776390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
189, 12
               

               
Conread position:
               
112-331
               

               
Cow position:
               
chr6:62805678-62805898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 208
               

               
Conread position:
               
113-315
               

               
Cow position:
               
chr6:58725409-58725605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
188, 11
               

               
Conread position:
               
113-342
               

               
Cow position:
               
chr6:53711441-53711668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
186, 10
               

               
Conread position:
               
114-315
               

               
Cow position:
               
chr6:8187151-8186949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
115-331
               

               
Cow position:
               
chr6:20075834-20076052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
115-331
               

               
Cow position:
               
chr6:35726135-35726344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
96, 9
               

               
Conread position:
               
115-337
               

               
Cow position:
               
chr6:6614661-6614885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
116-270
               

               
Cow position:
               
chr6:21590749-21590897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
116-306
               

               
Cow position:
               
chr6:19755039-19754849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
185, 9
               

               
Conread position:
               
116-314
               

               
Cow position:
               
chr6:67633518-67633323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr6:4691933-4691728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr6:15242876-15243078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr6:50467177-50467377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr6:55610195-55609989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
116-319
               

               
Cow position:
               
chr6:21475769-21475967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-322
               

               
Cow position:
               
chr6:16765354-16765153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr6:22876889-22876682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-323
               

               
Cow position:
               
chr6:66259771-66259983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
116-326
               

               
Cow position:
               
chr6:15447156-15446942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
118, 8
               

               
Conread position:
               
116-328
               

               
Cow position:
               
chr6:15937813-15937601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-329
               

               
Cow position:
               
chr6:12964894-12965107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr6:17997277-17997064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr6:33509831-33510045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
188, 7
               

               
Conread position:
               
116-331
               

               
Cow position:
               
chr6:47305383-47305595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
116-333
               

               
Cow position:
               
chr6:3952560-3952781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
184, 8
               

               
Conread position:
               
116-333
               

               
Cow position:
               
chr6:15058418-15058630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
188, 8
               

               
Conread position:
               
116-333
               

               
Cow position:
               
chr6:37149231-37149437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
116-335
               

               
Cow position:
               
chr6:50771317-50771100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
205, 8
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr6:62669907-62670135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 8
               

               
Conread position:
               
116-338
               

               
Cow position:
               
chr6:10176260-10176036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
117-279
               

               
Cow position:
               
chr6:2153556-2153395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
117-297
               

               
Cow position:
               
chr6:35842699-35842879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
5, 106
               

               
Conread position:
               
117-307
               

               
Cow position:
               
chr6:39093794-39093975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
185, 7
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr6:19563441-19563240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 7
               

               
Conread position:
               
117-316
               

               
Cow position:
               
chr6:55297052-55296853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr6:13742031-13742227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr6:19695852-19696046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
117-323
               

               
Cow position:
               
chr6:14914194-14913988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
184, 154
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr6:35181214-35181000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr6:22850214-22849997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
5, 203
               

               
Conread position:
               
117-333
               

               
Cow position:
               
chr6:42728688-42728902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
118-323
               

               
Cow position:
               
chr6:56582017-56581808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
119-279
               

               
Cow position:
               
chr6:36189743-36189901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
119-352
               

               
Cow position:
               
chr6:2547300-2547533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
120-345
               

               
Cow position:
               
chr6:28089003-28088779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
161, 100
               

               
Conread position:
               
121-326
               

               
Cow position:
               
chr6:45160012-45159806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
121-329
               

               
Cow position:
               
chr6:51526535-51526743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
122-326
               

               
Cow position:
               
chr6:57089250-57089453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
179, 107
               

               
Conread position:
               
123-272
               

               
Cow position:
               
chr6:58076441-58076590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-279
               

               
Cow position:
               
chr6:69153457-69153613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
123-304
               

               
Cow position:
               
chr6:34380767-34380589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
123-315
               

               
Cow position:
               
chr6:34475513-34475320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr6:11246812-11247009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
123-318
               

               
Cow position:
               
chr6:3936832-3937028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
123-323
               

               
Cow position:
               
chr6:51553189-51553391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 101
               

               
Conread position:
               
123-324
               

               
Cow position:
               
chr6:66363189-66362985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
123-326
               

               
Cow position:
               
chr6:8365859-8366063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
123-326
               

               
Cow position:
               
chr6:21535085-21535288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr6:54831524-54831728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
178, 97
               

               
Conread position:
               
123-328
               

               
Cow position:
               
chr6:19264451-19264245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 119
               

               
Conread position:
               
123-330
               

               
Cow position:
               
chr6:57079471-57079680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
123-332
               

               
Cow position:
               
chr6:6060524-6060314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
161, 110
               

               
Conread position:
               
123-334
               

               
Cow position:
               
chr6:16380592-16380805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
123-336
               

               
Cow position:
               
chr6:53145635-53145422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
179, 196
               

               
Conread position:
               
123-338
               

               
Cow position:
               
chr6:13565134-13565347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
179, 119
               

               
Conread position:
               
124-300
               

               
Cow position:
               
chr6:2584991-2585163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
124-313
               

               
Cow position:
               
chr6:19996663-19996851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
177, 75
               

               
Conread position:
               
124-314
               

               
Cow position:
               
chr6:41014930-41014737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
124-317
               

               
Cow position:
               
chr6:37395352-37395161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 114
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr6:17704880-17705080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr6:21399707-21399508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
178, 150
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr6:27636363-27636560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr6:53758246-53758047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 159
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr6:55548485-55548288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
177, 121
               

               
Conread position:
               
124-323
               

               
Cow position:
               
chr6:60852595-60852387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
124-324
               

               
Cow position:
               
chr6:43345393-43345191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
177, 108
               

               
Conread position:
               
124-324
               

               
Cow position:
               
chr6:54036094-54035893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
124-328
               

               
Cow position:
               
chr6:5095493-5095291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
177, 157
               

               
Conread position:
               
124-328
               

               
Cow position:
               
chr6:67290608-67290403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
124-329
               

               
Cow position:
               
chr6:55546126-55545920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr6:8369473-8369681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
177, 16
               

               
Conread position:
               
124-331
               

               
Cow position:
               
chr6:58304463-58304670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
177, 101
               

               
Conread position:
               
124-332
               

               
Cow position:
               
chr6:4468817-4469022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
177, 80
               

               
Conread position:
               
124-333
               

               
Cow position:
               
chr6:5330461-5330669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
157, 84
               

               
Conread position:
               
124-333
               

               
Cow position:
               
chr6:21184174-21183966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
177, 63
               

               
Conread position:
               
124-334
               

               
Cow position:
               
chr6:21715097-21715309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
124-340
               

               
Cow position:
               
chr6:26408454-26408240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
177, 15
               

               
Conread position:
               
124-399
               

               
Cow position:
               
chr6:21587381-21587114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
125-322
               

               
Cow position:
               
chr6:32043897-32044096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
126-300
               

               
Cow position:
               
chr6:68816218-68816392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
126-304
               

               
Cow position:
               
chr6:61644808-61644629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
126-315
               

               
Cow position:
               
chr6:36537310-36537125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
176, 104
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr6:32126107-32126291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
150, 56
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr6:45690559-45690380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr6:50504507-50504695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
176, 107
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr6:1941781-1941594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
175, 104
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr6:30023936-30024118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
175, 105
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr6:66978920-66979112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr6:67451320-67451131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr6:53024753-53024566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
175, 94
               

               
Conread position:
               
126-325
               

               
Cow position:
               
chr6:15305622-15305819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
126-328
               

               
Cow position:
               
chr6:44566478-44566677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 6
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr6:2078764-2078565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
176, 104
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr6:24468345-24468146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 108
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr6:60850751-60850953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
175, 113
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr6:16090954-16091151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
176, 96
               

               
Conread position:
               
126-332
               

               
Cow position:
               
chr6:60144147-60143944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
174, 108
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr6:12761330-12761536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
175, 57
               

               
Conread position:
               
126-333
               

               
Cow position:
               
chr6:52478360-52478152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
174, 98
               

               
Conread position:
               
126-340
               

               
Cow position:
               
chr6:53546086-53546293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
175, 103
               

               
Conread position:
               
126-351
               

               
Cow position:
               
chr6:60273960-60273737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 120
               

               
Conread position:
               
126-368
               

               
Cow position:
               
chr6:21470378-21470141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
180, 121
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr6:46282953-46282690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
127-315
               

               
Cow position:
               
chr6:4383531-4383712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
174, 86
               

               
Conread position:
               
127-326
               

               
Cow position:
               
chr6:24339334-24339538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
127-330
               

               
Cow position:
               
chr6:42034824-42035023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
174, 78
               

               
Conread position:
               
127-333
               

               
Cow position:
               
chr6:23696052-23696250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
128-308
               

               
Cow position:
               
chr6:39358288-39358112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
173, 105
               

               
Conread position:
               
128-316
               

               
Cow position:
               
chr6:3330046-3330235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
128-317
               

               
Cow position:
               
chr6:60186610-60186411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
128-322
               

               
Cow position:
               
chr6:8161635-8161440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
128-322
               

               
Cow position:
               
chr6:46465874-46466063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
176, 106
               

               
Conread position:
               
128-330
               

               
Cow position:
               
chr6:48097548-48097350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
52, 108
               

               
Conread position:
               
128-333
               

               
Cow position:
               
chr6:7628020-7628227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
173, 134
               

               
Conread position:
               
128-335
               

               
Cow position:
               
chr6:18776303-18776506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
173, 53
               

               
Conread position:
               
131-316
               

               
Cow position:
               
chr6:57467652-57467838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
131-326
               

               
Cow position:
               
chr6:28148312-28148513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
139, 64
               

               
Conread position:
               
133-316
               

               
Cow position:
               
chr6:50883618-50883440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 92
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chr6:32006397-32006209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
133-331
               

               
Cow position:
               
chr6:8731471-8731676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
133-331
               

               
Cow position:
               
chr6:51530130-51529934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
168, 148
               

               
Conread position:
               
133-333
               

               
Cow position:
               
chr6:68127795-68127996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 124
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr6:68594043-68594252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 148
               

               
Conread position:
               
133-373
               

               
Cow position:
               
chr6:57299816-57300068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
103, 242
               

               
Conread position:
               
133-399
               

               
Cow position:
               
chr6:21052392-21052127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 228
               

               
Conread position:
               
134-333
               

               
Cow position:
               
chr6:38640292-38640488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
167, 100
               

               
Conread position:
               
139-341
               

               
Cow position:
               
chr6:21350969-21350769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
111, 44
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chr6:14471427-14471592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-315
               

               
Cow position:
               
chr6:54820896-54821072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
140-316
               

               
Cow position:
               
chr6:67543993-67543816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-322
               

               
Cow position:
               
chr6:53811647-53811831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chr6:68272667-68272849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
159, 90
               

               
Conread position:
               
140-329
               

               
Cow position:
               
chr6:47540778-47540587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr6:18440413-18440223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
162, 146
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr6:63020407-63020596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr6:8125391-8125582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr6:44544084-44543893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
161, 85
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr6:50577585-50577771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr6:55044577-55044386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
162, 68
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr6:58697567-58697375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
140-332
               

               
Cow position:
               
chr6:48988495-48988689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr6:7539638-7539830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
161, 42
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chr6:54889664-54889858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 175
               

               
Conread position:
               
141-323
               

               
Cow position:
               
chr6:56061726-56061909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
141-329
               

               
Cow position:
               
chr6:14383741-14383928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
160, 53
               

               
Conread position:
               
144-335
               

               
Cow position:
               
chr6:7801328-7801141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
157, 90
               

               
Conread position:
               
149-323
               

               
Cow position:
               
chr6:62224495-62224667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
149-343
               

               
Cow position:
               
chr6:66947748-66947551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 91
               

               
Conread position:
               
150-323
               

               
Cow position:
               
chr6:66058633-66058463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
151, 91
               

               
Conread position:
               
150-381
               

               
Cow position:
               
chr6:21514533-21514298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 113
               

               
Conread position:
               
151-307
               

               
Cow position:
               
chr6:46161131-46160973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
153-300
               

               
Cow position:
               
chr6:48792855-48793002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
153-304
               

               
Cow position:
               
chr6:47450844-47450692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
153-314
               

               
Cow position:
               
chr6:56799817-56799654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr6:23025023-23024859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
153-316
               

               
Cow position:
               
chr6:55919857-55919693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
153-317
               

               
Cow position:
               
chr6:39414900-39415064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
153-317
               

               
Cow position:
               
chr6:45471512-45471346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
153-323
               

               
Cow position:
               
chr6:53765813-53765647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
153-327
               

               
Cow position:
               
chr6:59687735-59687561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
148, 166
               

               
Conread position:
               
153-331
               

               
Cow position:
               
chr6:57962320-57962144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
153-375
               

               
Cow position:
               
chr6:47790722-47790500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
148, 69
               

               
Conread position:
               
155-338
               

               
Cow position:
               
chr6:28559617-28559803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
156-279
               

               
Cow position:
               
chr6:30895911-30895789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
156-280
               

               
Cow position:
               
chr6:31865173-31865297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-300
               

               
Cow position:
               
chr6:41375850-41375992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
156-307
               

               
Cow position:
               
chr6:48379533-48379381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr6:19446330-19446484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr6:63182369-63182516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 67
               

               
Conread position:
               
156-315
               

               
Cow position:
               
chr6:10105898-10105745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr6:10039804-10039965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr6:19225303-19225153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
145, 55
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:10163746-10163920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:16387626-16387458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:16411691-16411859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:18447437-18447268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:21175418-21175581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
145, 78
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:29851449-29851614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
146, 71
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:34569488-34569662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 54
               

               
Conread position:
               
156-323
               

               
Cow position:
               
chr6:49685898-49686066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-324
               

               
Cow position:
               
chr6:38032938-38033105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
156-324
               

               
Cow position:
               
chr6:47782942-47783114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
156-326
               

               
Cow position:
               
chr6:21467187-21467018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
156-326
               

               
Cow position:
               
chr6:24903497-24903327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
145, 159
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr6:4323410-4323571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr6:63251842-63251671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr6:64432019-64432184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
142, 80
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr6:48435911-48436083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
156-328
               

               
Cow position:
               
chr6:54365247-54365075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 42
               

               
Conread position:
               
156-329
               

               
Cow position:
               
chr6:53511556-53511382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr6:35985056-35984881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr6:62437495-62437670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:4760072-4760242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:8688766-8688597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
145, 74
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:19936489-19936314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:27219248-27219421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:35342099-35341933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:43906603-43906425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:47958892-47959058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:54840427-54840246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
156-331
               

               
Cow position:
               
chr6:64429115-64428939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr6:15300752-15300585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr6:19045703-19045885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
156-332
               

               
Cow position:
               
chr6:54406719-54406550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr6:19401931-19402103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 25
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr6:21004757-21004936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
156-333
               

               
Cow position:
               
chr6:44540888-44541060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 73
               

               
Conread position:
               
156-334
               

               
Cow position:
               
chr6:1173876-1173690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
156-336
               

               
Cow position:
               
chr6:51581174-51580995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
156-337
               

               
Cow position:
               
chr6:7291396-7291571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
156-338
               

               
Cow position:
               
chr6:16627815-16627988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
156-340
               

               
Cow position:
               
chr6:34463507-34463329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
156-340
               

               
Cow position:
               
chr6:56022474-56022287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
156-340
               

               
Cow position:
               
chr6:67187765-67187941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
148, 83
               

               
Conread position:
               
156-342
               

               
Cow position:
               
chr6:14150299-14150117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 125
               

               
Conread position:
               
156-364
               

               
Cow position:
               
chr6:56986570-56986358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
157-312
               

               
Cow position:
               
chr6:36938949-36939109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
157-316
               

               
Cow position:
               
chr6:24651900-24651743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
157-323
               

               
Cow position:
               
chr6:40032272-40032425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 83
               

               
Conread position:
               
157-323
               

               
Cow position:
               
chr6:58666739-58666573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
138, 56
               

               
Conread position:
               
157-323
               

               
Cow position:
               
chr6:59101240-59101072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
157-331
               

               
Cow position:
               
chr6:15974442-15974271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
142, 75
               

               
Conread position:
               
157-333
               

               
Cow position:
               
chr6:53932765-53932587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
158-321
               

               
Cow position:
               
chr6:66329620-66329459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 123
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr6:14152808-14152645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
158-323
               

               
Cow position:
               
chr6:44474642-44474808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
158-327
               

               
Cow position:
               
chr6:22332315-22332146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
158-328
               

               
Cow position:
               
chr6:17404643-17404813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
158-329
               

               
Cow position:
               
chr6:42483497-42483669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
158-330
               

               
Cow position:
               
chr6:32336114-32336294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr6:16137688-16137513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr6:30123087-30122912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr6:36163826-36164003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
158-331
               

               
Cow position:
               
chr6:53732064-53732244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
158-333
               

               
Cow position:
               
chr6:66293567-66293740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
143, 123
               

               
Conread position:
               
158-335
               

               
Cow position:
               
chr6:55404994-55405172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 163
               

               
Conread position:
               
158-336
               

               
Cow position:
               
chr6:35727932-35728108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
158-337
               

               
Cow position:
               
chr6:51542981-51543162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
158-338
               

               
Cow position:
               
chr6:55014961-55015144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
158-375
               

               
Cow position:
               
chr6:34224161-34224371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
159-304
               

               
Cow position:
               
chr6:51120984-51120839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
159-319
               

               
Cow position:
               
chr6:18117966-18117806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
159-330
               

               
Cow position:
               
chr6:63426750-63426918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
159-333
               

               
Cow position:
               
chr6:26155232-26155401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
159-333
               

               
Cow position:
               
chr6:36202902-36203075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
159-337
               

               
Cow position:
               
chr6:38853575-38853396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
160-332
               

               
Cow position:
               
chr6:47245864-47246039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
163-300
               

               
Cow position:
               
chr6:39356201-39356336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
163-302
               

               
Cow position:
               
chr6:28483104-28483241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
163-312
               

               
Cow position:
               
chr6:50445030-50444880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
163-317
               

               
Cow position:
               
chr6:26764740-26764582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
163-319
               

               
Cow position:
               
chr6:57546141-57545987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
138, 123
               

               
Conread position:
               
163-321
               

               
Cow position:
               
chr6:29496080-29496236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
138, 125
               

               
Conread position:
               
163-322
               

               
Cow position:
               
chr6:62683462-62683620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
163-323
               

               
Cow position:
               
chr6:14263802-14263643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
138, 27
               

               
Conread position:
               
163-329
               

               
Cow position:
               
chr6:14063214-14063036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
163-331
               

               
Cow position:
               
chr6:32867130-32866968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
138, 20
               

               
Conread position:
               
163-331
               

               
Cow position:
               
chr6:46558145-46558310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 66
               

               
Conread position:
               
163-334
               

               
Cow position:
               
chr6:10225568-10225393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
163-342
               

               
Cow position:
               
chr6:31928724-31928903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
134, 177
               

               
Conread position:
               
164-316
               

               
Cow position:
               
chr6:57935484-57935337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
164-321
               

               
Cow position:
               
chr6:12669184-12669342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
164-329
               

               
Cow position:
               
chr6:54828234-54828068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
164-330
               

               
Cow position:
               
chr6:50451928-50452099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
164-331
               

               
Cow position:
               
chr6:35775570-35775738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 156
               

               
Conread position:
               
164-333
               

               
Cow position:
               
chr6:13097312-13097140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
165-323
               

               
Cow position:
               
chr6:16016123-16016281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
166-304
               

               
Cow position:
               
chr6:41733723-41733862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
166-317
               

               
Cow position:
               
chr6:21347060-21346913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
135, 66
               

               
Conread position:
               
166-355
               

               
Cow position:
               
chr6:19727840-19728029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 140
               

               
Conread position:
               
169-333
               

               
Cow position:
               
chr6:15111748-15111578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
169-337
               

               
Cow position:
               
chr6:53138843-53138678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
170-321
               

               
Cow position:
               
chr6:31847146-31847000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
170-323
               

               
Cow position:
               
chr6:23381574-23381420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
171-333
               

               
Cow position:
               
chr6:49824998-49824835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
173-333
               

               
Cow position:
               
chr6:55196310-55196472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
181-303
               

               
Cow position:
               
chr6:17172931-17173053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-331
               

               
Cow position:
               
chr6:67810878-67810734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
120, 57
               

               
Conread position:
               
182-369
               

               
Cow position:
               
chr6:51648931-51649120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
119, 165
               

               
Conread position:
               
187-323
               

               
Cow position:
               
chr6:62292965-62292828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
187-334
               

               
Cow position:
               
chr6:63762469-63762323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
190-330
               

               
Cow position:
               
chr6:29775726-29775871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
190-331
               

               
Cow position:
               
chr6:30688397-30688258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
190-339
               

               
Cow position:
               
chr6:41147334-41147478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
111, 102
               

               
Conread position:
               
192-328
               

               
Cow position:
               
chr6:62596361-62596226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
193-316
               

               
Cow position:
               
chr6:65831478-65831602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
195-319
               

               
Cow position:
               
chr6:16700371-16700496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
199-331
               

               
Cow position:
               
chr6:51019273-51019406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
200-331
               

               
Cow position:
               
chr6:456827-456692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
202-330
               

               
Cow position:
               
chr6:16738739-16738868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               
Show alignments to all cow chromosomes.