Cow genome map

Conread name: Ss1.1-Pig4-TMW8047L06.3

Conread position: 35-292
Cow position: chr27:14859640-14859906 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 51

Conread position: 37-329
Cow position: chr27:29374722-29374439 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 78

Conread position: 37-365
Cow position: chr27:28924203-28924542 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 38

Conread position: 37-403
Cow position: chr27:27742532-27742902 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 244
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 145, 242

Conread position: 39-256
Cow position: chr27:816444-816216 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 157, 26

Conread position: 39-309
Cow position: chr27:27557120-27557398 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 12

Conread position: 39-314
Cow position: chr27:16581840-16581574 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 156, 37

Conread position: 39-357
Cow position: chr27:28907912-28907584 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 110

Conread position: 40-354
Cow position: chr27:19731505-19731183 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 17

Conread position: 43-258
Cow position: chr27:16037644-16037418 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 104

Conread position: 43-308
Cow position: chr27:31249557-31249813 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 174
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 43-314
Cow position: chr27:27151991-27152267 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 53

Conread position: 43-315
Cow position: chr27:17050123-17049844 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 127, 40

Conread position: 43-352
Cow position: chr27:31547218-31546904 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 105

Conread position: 43-366
Cow position: chr27:12282012-12282349 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 139, 201

Conread position: 44-332
Cow position: chr27:28984093-28984392 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 7

Conread position: 48-292
Cow position: chr27:3990473-3990218 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 100

Conread position: 50-319
Cow position: chr27:17422934-17423222 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 51-309
Cow position: chr27:8972774-8973043 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 88, 97

Conread position: 51-309
Cow position: chr27:27501522-27501786 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 103

Conread position: 51-329
Cow position: chr27:1081833-1081554 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 167, 116

Conread position: 51-332
Cow position: chr27:8201264-8201562 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 98

Conread position: 51-338
Cow position: chr27:8586812-8587114 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 51-342
Cow position: chr27:26654128-26653835 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 31

Conread position: 51-345
Cow position: chr27:26330261-26330565 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 10, 104

Conread position: 51-348
Cow position: chr27:7418038-7418352 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 259

Conread position: 51-358
Cow position: chr27:11256356-11256035 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 123, 264

Conread position: 51-373
Cow position: chr27:21350176-21350512 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 228

Conread position: 57-286
Cow position: chr27:12239404-12239644 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 54

Conread position: 57-286
Cow position: chr27:13316894-13317132 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 69

Conread position: 57-294
Cow position: chr27:19424041-19423805 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 91

Conread position: 57-301
Cow position: chr27:2681856-2682114 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 57-305
Cow position: chr27:15405957-15406215 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 79

Conread position: 57-306
Cow position: chr27:15866966-15866710 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 23

Conread position: 57-309
Cow position: chr27:15033555-15033292 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chr27:15634007-15633747 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chr27:16332143-16331890 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chr27:19300230-19299966 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 57-309
Cow position: chr27:21451779-21452045 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chr27:25784423-25784164 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 39

Conread position: 57-309
Cow position: chr27:25800875-25800611 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 91

Conread position: 57-310
Cow position: chr27:20810752-20811017 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 82, 91

Conread position: 57-314
Cow position: chr27:13353642-13353910 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 22

Conread position: 57-314
Cow position: chr27:30696893-30697154 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 140, 8

Conread position: 57-331
Cow position: chr27:4982708-4982985 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chr27:2331839-2332126 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chr27:4331400-4331113 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 74

Conread position: 57-332
Cow position: chr27:12750872-12751156 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chr27:19523373-19523084 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 82, 91

Conread position: 57-333
Cow position: chr27:11481267-11481558 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 82, 91

Conread position: 57-333
Cow position: chr27:16031061-16030770 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 82, 91

Conread position: 57-345
Cow position: chr27:9333003-9333305 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 82, 91

Conread position: 57-346
Cow position: chr27:13901460-13901762 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 82, 91

Conread position: 57-354
Cow position: chr27:13409331-13409647 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 134

Conread position: 57-365
Cow position: chr27:344594-344268 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 27, 22

Conread position: 57-373
Cow position: chr27:2557657-2557327 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 57-373
Cow position: chr27:15871993-15871665 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 91

Conread position: 57-373
Cow position: chr27:24295924-24295593 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 82, 97

Conread position: 57-374
Cow position: chr27:13182949-13182622 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 156, 0

Conread position: 57-406
Cow position: chr27:27291729-27292090 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 85, 92

Conread position: 62-292
Cow position: chr27:8592727-8592956 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 63

Conread position: 62-331
Cow position: chr27:20865698-20865984 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 129, 61

Conread position: 62-357
Cow position: chr27:19932217-19931906 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 88

Conread position: 63-330
Cow position: chr27:11954443-11954717 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 121, 37

Conread position: 64-310
Cow position: chr27:22586174-22586435 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 65-309
Cow position: chr27:8262182-8262439 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 120, 22

Conread position: 65-313
Cow position: chr27:30583558-30583307 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 191

Conread position: 65-332
Cow position: chr27:11489967-11490246 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 74, 22

Conread position: 65-332
Cow position: chr27:27186664-27186924 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 18

Conread position: 65-332
Cow position: chr27:29811647-29811927 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 84

Conread position: 65-348
Cow position: chr27:18559590-18559292 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 137, 216

Conread position: 65-354
Cow position: chr27:18954387-18954690 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 268

Conread position: 65-362
Cow position: chr27:21283906-21283594 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 261

Conread position: 65-365
Cow position: chr27:26856381-26856699 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 66-276
Cow position: chr27:9970516-9970738 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 66-294
Cow position: chr27:723700-723940 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 66-304
Cow position: chr27:21102638-21102883 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 48

Conread position: 66-314
Cow position: chr27:23794287-23794035 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 157

Conread position: 66-317
Cow position: chr27:3653355-3653092 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 83

Conread position: 66-329
Cow position: chr27:2001190-2001467 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 107, 199

Conread position: 66-329
Cow position: chr27:8959671-8959394 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chr27:13422819-13422540 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 0

Conread position: 66-330
Cow position: chr27:30306924-30306642 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 66-332
Cow position: chr27:791701-791420 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 120, 0

Conread position: 66-332
Cow position: chr27:1521019-1521295 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 262

Conread position: 66-332
Cow position: chr27:12006493-12006774 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 120, 0

Conread position: 66-373
Cow position: chr27:3649826-3650148 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 108, 305

Conread position: 66-373
Cow position: chr27:11434515-11434829 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 28

Conread position: 66-373
Cow position: chr27:22797314-22796992 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 108, 0

Conread position: 66-373
Cow position: chr27:29036037-29035715 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 120, 0

Conread position: 67-300
Cow position: chr27:22152179-22152413 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 124, 203

Conread position: 67-309
Cow position: chr27:10670383-10670635 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 118, 68

Conread position: 67-342
Cow position: chr27:11349789-11349498 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 212

Conread position: 68-309
Cow position: chr27:1189009-1189256 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 71, 80

Conread position: 68-309
Cow position: chr27:3112237-3111987 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 80

Conread position: 68-314
Cow position: chr27:17565288-17565046 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 30

Conread position: 68-329
Cow position: chr27:165572-165298 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 67

Conread position: 68-330
Cow position: chr27:1031207-1030930 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 68-330
Cow position: chr27:14297554-14297829 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 204

Conread position: 68-330
Cow position: chr27:15099989-15100263 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 67

Conread position: 68-342
Cow position: chr27:1141042-1141331 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 68-352
Cow position: chr27:12555188-12554900 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 58

Conread position: 68-354
Cow position: chr27:10579294-10579594 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 75

Conread position: 72-332
Cow position: chr27:20001465-20001190 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 73-279
Cow position: chr27:24438519-24438303 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 165

Conread position: 75-306
Cow position: chr27:1904254-1904017 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 118, 90

Conread position: 75-332
Cow position: chr27:9989525-9989255 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 73

Conread position: 75-365
Cow position: chr27:17864337-17864637 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 113, 37

Conread position: 76-352
Cow position: chr27:12164652-12164378 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 56, 77

Conread position: 76-354
Cow position: chr27:15814056-15813781 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 76

Conread position: 77-269
Cow position: chr27:19064668-19064864 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 17

Conread position: 77-321
Cow position: chr27:16428011-16428269 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 168

Conread position: 77-365
Cow position: chr27:8297326-8297014 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 79-324
Cow position: chr27:25493006-25492755 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 110, 0

Conread position: 80-293
Cow position: chr27:12115112-12114894 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 209

Conread position: 80-370
Cow position: chr27:30476887-30476582 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 20

Conread position: 80-373
Cow position: chr27:10383790-10384097 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 83-309
Cow position: chr27:25873978-25874219 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 83-329
Cow position: chr27:16045091-16045353 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 86-330
Cow position: chr27:8187201-8187456 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 86-330
Cow position: chr27:8202635-8202376 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 87-331
Cow position: chr27:25677052-25676802 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 172

Conread position: 89-308
Cow position: chr27:30777357-30777120 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 89-309
Cow position: chr27:1501881-1502093 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 59

Conread position: 89-309
Cow position: chr27:22038004-22038225 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 44

Conread position: 89-353
Cow position: chr27:12173309-12173584 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 43

Conread position: 89-354
Cow position: chr27:24065750-24066022 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 27

Conread position: 89-373
Cow position: chr27:15272708-15272410 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 55, 59

Conread position: 89-381
Cow position: chr27:4665273-4664972 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 18

Conread position: 89-405
Cow position: chr27:5268719-5269043 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 277

Conread position: 90-365
Cow position: chr27:4978964-4979241 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 32

Conread position: 91-342
Cow position: chr27:8319914-8320169 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 42

Conread position: 92-359
Cow position: chr27:26644873-26644602 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 59, 36

Conread position: 101-307
Cow position: chr27:23200493-23200282 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 158

Conread position: 102-329
Cow position: chr27:19487604-19487361 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 114-305
Cow position: chr27:28235971-28235783 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 38

Conread position: 115-365
Cow position: chr27:10321457-10321716 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 42

Conread position: 123-332
Cow position: chr27:14328201-14328406 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 41

Conread position: 125-364
Cow position: chr27:14643103-14643350 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 23

Conread position: 132-329
Cow position: chr27:29021973-29021770 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 64, 135

Conread position: 132-342
Cow position: chr27:24571028-24570805 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 140-314
Cow position: chr27:1293667-1293852 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 7

Conread position: 140-357
Cow position: chr27:26545179-26545406 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 7

Conread position: 143-365
Cow position: chr27:16551208-16550969 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 99

Conread position: 146-332
Cow position: chr27:12147317-12147518 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 146-365
Cow position: chr27:12489965-12489742 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 97

Conread position: 175-309
Cow position: chr27:13198612-13198470 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 175-332
Cow position: chr27:29374447-29374280 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 176-330
Cow position: chr27:29446645-29446481 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 176-332
Cow position: chr27:523480-523647 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 176-332
Cow position: chr27:724004-724170 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 176-332
Cow position: chr27:11651556-11651722 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 182-342
Cow position: chr27:20827998-20828168 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 200-357
Cow position: chr27:16110645-16110804 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 116, 146

Conread position: 206-340
Cow position: chr27:23233487-23233626 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 206-348
Cow position: chr27:16836888-16836744 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 57

Conread position: 207-358
Cow position: chr27:7748508-7748658 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 207-358
Cow position: chr27:15508751-15508906 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 207-373
Cow position: chr27:21986566-21986403 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 74

Conread position: 208-342
Cow position: chr27:11290988-11291125 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 211-366
Cow position: chr27:21247073-21246914 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 38, 156

Conread position: 218-373
Cow position: chr27:30446888-30446731 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 141

Conread position: 219-330
Cow position: chr27:11606376-11606262 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 219-330
Cow position: chr27:15178874-15178760 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 219-332
Cow position: chr27:1481403-1481519 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 219-332
Cow position: chr27:23893844-23893960 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 221-331
Cow position: chr27:4768832-4768945 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.