Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047L06.3
        

               Conread position:
               27-360
               

               Cow position:
               chr3:12334501-12334165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               33-335
               

               Cow position:
               chr3:22867726-22867415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               33-373
               

               Cow position:
               chr3:27090949-27090603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 8
               

               Conread position:
               35-304
               

               Cow position:
               chr3:57968386-57968661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               160, 29
               

               Conread position:
               35-314
               

               Cow position:
               chr3:26660721-26660436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               37-309
               

               Cow position:
               chr3:24585983-24585697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               148, 14
               

               Conread position:
               37-309
               

               Cow position:
               chr3:66623434-66623716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               37-362
               

               Cow position:
               chr3:7740184-7739845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 29
               

               Conread position:
               38-206
               

               Cow position:
               chr3:26596278-26596447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 13
               

               Conread position:
               38-309
               

               Cow position:
               chr3:77448233-77448503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               38-314
               

               Cow position:
               chr3:61677784-61678069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               39-276
               

               Cow position:
               chr3:20999822-20999574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               146, 12
               

               Conread position:
               39-309
               

               Cow position:
               chr3:17937768-17937488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               39-309
               

               Cow position:
               chr3:37628135-37628413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               39-309
               

               Cow position:
               chr3:40336896-40336615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               135, 31
               

               Conread position:
               39-314
               

               Cow position:
               chr3:55374325-55374615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               164, 12
               

               Conread position:
               39-314
               

               Cow position:
               chr3:72175056-72174770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               135, 12
               

               Conread position:
               39-330
               

               Cow position:
               chr3:34393037-34392735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               39-332
               

               Cow position:
               chr3:30321506-30321801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               100, 18
               

               Conread position:
               39-342
               

               Cow position:
               chr3:4039684-4039369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               100, 12
               

               Conread position:
               39-357
               

               Cow position:
               chr3:26567025-26567356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               39-357
               

               Cow position:
               chr3:63202487-63202812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               39-358
               

               Cow position:
               chr3:56148545-56148875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               39-361
               

               Cow position:
               chr3:31934088-31933751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               147, 26
               

               Conread position:
               39-365
               

               Cow position:
               chr3:52651705-52651365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               146, 12
               

               Conread position:
               39-373
               

               Cow position:
               chr3:16156773-16157114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               39-373
               

               Cow position:
               chr3:70914016-70913664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               39-375
               

               Cow position:
               chr3:23497508-23497163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               160, 12
               

               Conread position:
               40-290
               

               Cow position:
               chr3:81087328-81087082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               40-292
               

               Cow position:
               chr3:9591799-9591539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               133, 26
               

               Conread position:
               40-300
               

               Cow position:
               chr3:597358-597620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 17
               

               Conread position:
               40-314
               

               Cow position:
               chr3:31321576-31321850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               40-315
               

               Cow position:
               chr3:62213774-62213504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               40-331
               

               Cow position:
               chr3:51477943-51478254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               39, 17
               

               Conread position:
               40-340
               

               Cow position:
               chr3:42050821-42050517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 8
               

               Conread position:
               40-354
               

               Cow position:
               chr3:58687484-58687172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               40-357
               

               Cow position:
               chr3:16114654-16114978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 208
               

               Conread position:
               40-362
               

               Cow position:
               chr3:53414267-53414597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               7, 11
               

               Conread position:
               42-292
               

               Cow position:
               chr3:29802060-29802323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               42-309
               

               Cow position:
               chr3:25997848-25997574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               97, 105
               

               Conread position:
               42-309
               

               Cow position:
               chr3:26899637-26899910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               42-309
               

               Cow position:
               chr3:69977900-69977632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 25
               

               Conread position:
               42-314
               

               Cow position:
               chr3:70520035-70519765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               154, 50
               

               Conread position:
               42-332
               

               Cow position:
               chr3:34557124-34556833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               90, 6
               

               Conread position:
               42-401
               

               Cow position:
               chr3:32220963-32221331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               97, 80
               

               Conread position:
               43-211
               

               Cow position:
               chr3:14748579-14748406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               140, 52
               

               Conread position:
               43-276
               

               Cow position:
               chr3:10855070-10854836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               41, 67
               

               Conread position:
               43-309
               

               Cow position:
               chr3:16869153-16868876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               101, 105
               

               Conread position:
               43-309
               

               Cow position:
               chr3:16897247-16896980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               147, 12
               

               Conread position:
               43-309
               

               Cow position:
               chr3:56101502-56101781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               43-309
               

               Cow position:
               chr3:80277647-80277370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 46
               

               Conread position:
               43-314
               

               Cow position:
               chr3:51458155-51458422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               154, 64
               

               Conread position:
               43-314
               

               Cow position:
               chr3:56712765-56713041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               151, 68
               

               Conread position:
               43-317
               

               Cow position:
               chr3:62246953-62246681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               43-318
               

               Cow position:
               chr3:48095847-48095567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               101, 40
               

               Conread position:
               43-319
               

               Cow position:
               chr3:40741314-40741044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               154, 34
               

               Conread position:
               43-320
               

               Cow position:
               chr3:19824814-19824528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               152, 58
               

               Conread position:
               43-332
               

               Cow position:
               chr3:8451660-8451382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               139, 119
               

               Conread position:
               43-342
               

               Cow position:
               chr3:79978933-79978628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               154, 88
               

               Conread position:
               43-348
               

               Cow position:
               chr3:58953391-58953702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               143, 37
               

               Conread position:
               43-357
               

               Cow position:
               chr3:18243531-18243235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               177, 117
               

               Conread position:
               43-357
               

               Cow position:
               chr3:36170690-36170381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               139, 102
               

               Conread position:
               43-357
               

               Cow position:
               chr3:63198568-63198887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               144, 57
               

               Conread position:
               43-358
               

               Cow position:
               chr3:18996470-18996792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               143, 308
               

               Conread position:
               43-358
               

               Cow position:
               chr3:63219187-63219506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               43-362
               

               Cow position:
               chr3:9289859-9290188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               43-362
               

               Cow position:
               chr3:39214626-39214961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 223
               

               Conread position:
               43-362
               

               Cow position:
               chr3:42983003-42982674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               146, 51
               

               Conread position:
               43-365
               

               Cow position:
               chr3:44365278-44365608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               152, 12
               

               Conread position:
               43-366
               

               Cow position:
               chr3:64678686-64679003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               158, 36
               

               Conread position:
               43-406
               

               Cow position:
               chr3:52726023-52725646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 243
               

               Conread position:
               44-283
               

               Cow position:
               chr3:16789112-16789350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               95, 12
               

               Conread position:
               44-290
               

               Cow position:
               chr3:56919324-56919579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               44-309
               

               Cow position:
               chr3:579426-579703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               44-309
               

               Cow position:
               chr3:46683087-46683364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               141, 123
               

               Conread position:
               44-309
               

               Cow position:
               chr3:61278005-61278276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               44-330
               

               Cow position:
               chr3:40520686-40520385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               44-332
               

               Cow position:
               chr3:9422232-9421939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               149, 13
               

               Conread position:
               44-332
               

               Cow position:
               chr3:22918777-22919076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 7
               

               Conread position:
               44-332
               

               Cow position:
               chr3:40049142-40049445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               44-332
               

               Cow position:
               chr3:70074851-70074547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               44-352
               

               Cow position:
               chr3:43084493-43084799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               170, 99
               

               Conread position:
               44-357
               

               Cow position:
               chr3:5887140-5887465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 7
               

               Conread position:
               44-358
               

               Cow position:
               chr3:72863799-72863466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               68, 108
               

               Conread position:
               44-373
               

               Cow position:
               chr3:54766224-54766551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 87
               

               Conread position:
               44-373
               

               Cow position:
               chr3:56297638-56297982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               46-276
               

               Cow position:
               chr3:46006351-46006586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               47-239
               

               Cow position:
               chr3:19794836-19794636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               47-330
               

               Cow position:
               chr3:37972285-37972581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               47-362
               

               Cow position:
               chr3:51254654-51254986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               48-292
               

               Cow position:
               chr3:57742771-57743023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               48-304
               

               Cow position:
               chr3:73416256-73416525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               128, 244
               

               Conread position:
               48-309
               

               Cow position:
               chr3:80564059-80564329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               48-332
               

               Cow position:
               chr3:60932524-60932822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               126, 45
               

               Conread position:
               48-342
               

               Cow position:
               chr3:58129349-58129652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               135, 229
               

               Conread position:
               48-351
               

               Cow position:
               chr3:67430633-67430318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               143, 47
               

               Conread position:
               50-309
               

               Cow position:
               chr3:40344485-40344752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               124, 45
               

               Conread position:
               50-330
               

               Cow position:
               chr3:68889313-68889018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               50-332
               

               Cow position:
               chr3:27689727-27690012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 123
               

               Conread position:
               50-357
               

               Cow position:
               chr3:53519062-53519364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               50-362
               

               Cow position:
               chr3:60177842-60177527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               50-365
               

               Cow position:
               chr3:43671353-43671036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               51-291
               

               Cow position:
               chr3:18886717-18886970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               51-309
               

               Cow position:
               chr3:14284994-14285257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 97
               

               Conread position:
               51-309
               

               Cow position:
               chr3:56697097-56697368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               51-309
               

               Cow position:
               chr3:72390178-72390449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 97
               

               Conread position:
               51-314
               

               Cow position:
               chr3:7155546-7155271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 97
               

               Conread position:
               51-314
               

               Cow position:
               chr3:76354712-76354979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               142, 174
               

               Conread position:
               51-329
               

               Cow position:
               chr3:19718008-19717721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               51-329
               

               Cow position:
               chr3:21593543-21593835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               122, 221
               

               Conread position:
               51-330
               

               Cow position:
               chr3:2834279-2833984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               51-330
               

               Cow position:
               chr3:65085194-65085488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               51-331
               

               Cow position:
               chr3:11784623-11784910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               10, 30
               

               Conread position:
               51-331
               

               Cow position:
               chr3:45184727-45184445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               15, 97
               

               Conread position:
               51-332
               

               Cow position:
               chr3:21082126-21082417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               93, 97
               

               Conread position:
               51-332
               

               Cow position:
               chr3:25056947-25057220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               263, 35
               

               Conread position:
               51-332
               

               Cow position:
               chr3:31422861-31422569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               134, 215
               

               Conread position:
               51-332
               

               Cow position:
               chr3:50921298-50921583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               51-332
               

               Cow position:
               chr3:56485000-56484698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               51-335
               

               Cow position:
               chr3:15656055-15655757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               51-345
               

               Cow position:
               chr3:14452920-14453221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               139, 36
               

               Conread position:
               51-345
               

               Cow position:
               chr3:33124995-33124690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               51-346
               

               Cow position:
               chr3:42507953-42507643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               51-347
               

               Cow position:
               chr3:38252093-38252391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               115, 56
               

               Conread position:
               51-357
               

               Cow position:
               chr3:19753475-19753154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               51-357
               

               Cow position:
               chr3:22220401-22220721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               88, 97
               

               Conread position:
               51-357
               

               Cow position:
               chr3:47272619-47272297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               51-357
               

               Cow position:
               chr3:49911601-49911915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               29, 64
               

               Conread position:
               51-357
               

               Cow position:
               chr3:56645070-56644749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               51-357
               

               Cow position:
               chr3:59603062-59603382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               88, 97
               

               Conread position:
               51-358
               

               Cow position:
               chr3:12750158-12750479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               51-359
               

               Cow position:
               chr3:18246325-18245999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               51-365
               

               Cow position:
               chr3:48599799-48600116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 36
               

               Conread position:
               51-373
               

               Cow position:
               chr3:31224535-31224883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               51-373
               

               Cow position:
               chr3:76000703-76000363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 102
               

               Conread position:
               52-309
               

               Cow position:
               chr3:22724511-22724253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               55-292
               

               Cow position:
               chr3:40978706-40978953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               137, 89
               

               Conread position:
               55-314
               

               Cow position:
               chr3:15379941-15379675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               117, 11
               

               Conread position:
               56-362
               

               Cow position:
               chr3:56685001-56685324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               68, 318
               

               Conread position:
               57-262
               

               Cow position:
               chr3:2851979-2851762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               57-272
               

               Cow position:
               chr3:6689095-6689323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 92
               

               Conread position:
               57-281
               

               Cow position:
               chr3:40826663-40826899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-282
               

               Cow position:
               chr3:56103006-56103240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-285
               

               Cow position:
               chr3:43418912-43419149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               57-286
               

               Cow position:
               chr3:11334595-11334356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               117, 30
               

               Conread position:
               57-292
               

               Cow position:
               chr3:7476654-7476408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 92
               

               Conread position:
               57-292
               

               Cow position:
               chr3:81101345-81101592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-293
               

               Cow position:
               chr3:24572900-24572654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               57-297
               

               Cow position:
               chr3:72669293-72669042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-304
               

               Cow position:
               chr3:17460483-17460741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               57-304
               

               Cow position:
               chr3:67545372-67545129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               82, 66
               

               Conread position:
               57-307
               

               Cow position:
               chr3:12673110-12672859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               147, 44
               

               Conread position:
               57-307
               

               Cow position:
               chr3:37040557-37040803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               130, 200
               

               Conread position:
               57-309
               

               Cow position:
               chr3:226624-226361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:2507374-2507111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               57-309
               

               Cow position:
               chr3:5951357-5951095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:6864925-6865180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:8586152-8585886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               57-309
               

               Cow position:
               chr3:14864149-14864413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:16332687-16332948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               57-309
               

               Cow position:
               chr3:17864696-17864960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:22235235-22234965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               57-309
               

               Cow position:
               chr3:24351954-24352210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 78
               

               Conread position:
               57-309
               

               Cow position:
               chr3:36671351-36671087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:37983099-37982835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               57-309
               

               Cow position:
               chr3:40101592-40101325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               57-309
               

               Cow position:
               chr3:43190003-43189742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               82, 63
               

               Conread position:
               57-309
               

               Cow position:
               chr3:46753113-46753379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:49387915-49388180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               117, 100
               

               Conread position:
               57-309
               

               Cow position:
               chr3:56160559-56160296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:57456211-57456479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-309
               

               Cow position:
               chr3:61538866-61539130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               57-313
               

               Cow position:
               chr3:27866929-27867187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               144, 78
               

               Conread position:
               57-314
               

               Cow position:
               chr3:13311737-13311466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               57-314
               

               Cow position:
               chr3:49907766-49907499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               116, 215
               

               Conread position:
               57-317
               

               Cow position:
               chr3:3031498-3031769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               57-320
               

               Cow position:
               chr3:29391855-29391587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-329
               

               Cow position:
               chr3:14680354-14680635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               57-329
               

               Cow position:
               chr3:39921679-39921393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-329
               

               Cow position:
               chr3:45947258-45946972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               117, 54
               

               Conread position:
               57-329
               

               Cow position:
               chr3:47986706-47986993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-329
               

               Cow position:
               chr3:64655475-64655758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               117, 86
               

               Conread position:
               57-329
               

               Cow position:
               chr3:65178638-65178925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               117, 36
               

               Conread position:
               57-329
               

               Cow position:
               chr3:68870483-68870201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 208
               

               Conread position:
               57-330
               

               Cow position:
               chr3:22352880-22353164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               130, 197
               

               Conread position:
               57-330
               

               Cow position:
               chr3:26742606-26742322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-330
               

               Cow position:
               chr3:53880000-53879711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-331
               

               Cow position:
               chr3:8563803-8563528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               57-331
               

               Cow position:
               chr3:26993391-26993677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               57-331
               

               Cow position:
               chr3:77366440-77366156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               87, 91
               

               Conread position:
               57-332
               

               Cow position:
               chr3:173771-174054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               57-332
               

               Cow position:
               chr3:302488-302778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-332
               

               Cow position:
               chr3:3372918-3372629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-332
               

               Cow position:
               chr3:10243926-10244216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               82, 90
               

               Conread position:
               57-332
               

               Cow position:
               chr3:12797795-12797505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               116, 219
               

               Conread position:
               57-332
               

               Cow position:
               chr3:16293650-16293359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 191
               

               Conread position:
               57-332
               

               Cow position:
               chr3:18814772-18815062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-332
               

               Cow position:
               chr3:21100070-21100360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-332
               

               Cow position:
               chr3:23169958-23169679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               139, 52
               

               Conread position:
               57-332
               

               Cow position:
               chr3:24442836-24442550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-332
               

               Cow position:
               chr3:25753520-25753819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               127, 30
               

               Conread position:
               57-332
               

               Cow position:
               chr3:38096167-38096457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               57-332
               

               Cow position:
               chr3:65473696-65473984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 74
               

               Conread position:
               57-332
               

               Cow position:
               chr3:66887931-66887641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-332
               

               Cow position:
               chr3:73451047-73450756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-332
               

               Cow position:
               chr3:75479128-75479411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               57-332
               

               Cow position:
               chr3:77472722-77472444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-335
               

               Cow position:
               chr3:12676376-12676079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 72
               

               Conread position:
               57-335
               

               Cow position:
               chr3:49336459-49336747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               129, 195
               

               Conread position:
               57-339
               

               Cow position:
               chr3:57481478-57481187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               57-342
               

               Cow position:
               chr3:13360714-13361013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-342
               

               Cow position:
               chr3:49541941-49541641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 92
               

               Conread position:
               57-342
               

               Cow position:
               chr3:64024765-64024473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               57-346
               

               Cow position:
               chr3:33254595-33254293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               118, 133
               

               Conread position:
               57-354
               

               Cow position:
               chr3:19797838-19797522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               57-354
               

               Cow position:
               chr3:19883725-19884039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-354
               

               Cow position:
               chr3:20475774-20476080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               117, 202
               

               Conread position:
               57-354
               

               Cow position:
               chr3:24432648-24432958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-354
               

               Cow position:
               chr3:36121442-36121757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               57-354
               

               Cow position:
               chr3:64171506-64171808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               126, 161
               

               Conread position:
               57-354
               

               Cow position:
               chr3:68696699-68696393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               159, 117
               

               Conread position:
               57-357
               

               Cow position:
               chr3:521843-522154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 72
               

               Conread position:
               57-357
               

               Cow position:
               chr3:2707607-2707293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-357
               

               Cow position:
               chr3:3300909-3301206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               151, 9
               

               Conread position:
               57-357
               

               Cow position:
               chr3:21178991-21178675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               66, 92
               

               Conread position:
               57-357
               

               Cow position:
               chr3:23010622-23010933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-357
               

               Cow position:
               chr3:42846611-42846925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-357
               

               Cow position:
               chr3:45881004-45881312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 228
               

               Conread position:
               57-357
               

               Cow position:
               chr3:46506035-46506350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               57-357
               

               Cow position:
               chr3:48603519-48603842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               56, 100
               

               Conread position:
               57-357
               

               Cow position:
               chr3:49416580-49416269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 91
               

               Conread position:
               57-357
               

               Cow position:
               chr3:51235235-51234923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               57-357
               

               Cow position:
               chr3:63176614-63176923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               156, 151
               

               Conread position:
               57-357
               

               Cow position:
               chr3:69930569-69930255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               57-357
               

               Cow position:
               chr3:72633340-72633654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               82, 36
               

               Conread position:
               57-357
               

               Cow position:
               chr3:75038575-75038260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-357
               

               Cow position:
               chr3:78024169-78023866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 22
               

               Conread position:
               57-358
               

               Cow position:
               chr3:14279946-14280258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               57-358
               

               Cow position:
               chr3:24886853-24887168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-365
               

               Cow position:
               chr3:18184181-18184500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               75, 26
               

               Conread position:
               57-366
               

               Cow position:
               chr3:76187805-76188115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               118, 127
               

               Conread position:
               57-373
               

               Cow position:
               chr3:12872386-12872702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               157, 44
               

               Conread position:
               57-373
               

               Cow position:
               chr3:13276011-13275680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-373
               

               Cow position:
               chr3:19216166-19216495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 191
               

               Conread position:
               57-373
               

               Cow position:
               chr3:36874794-36874464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-373
               

               Cow position:
               chr3:38869833-38870163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               57-373
               

               Cow position:
               chr3:42186736-42187066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               130, 57
               

               Conread position:
               57-373
               

               Cow position:
               chr3:45977766-45978097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               57-373
               

               Cow position:
               chr3:68500726-68501055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-373
               

               Cow position:
               chr3:68717443-68717114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               57-373
               

               Cow position:
               chr3:73763365-73763039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               82, 91
               

               Conread position:
               57-374
               

               Cow position:
               chr3:76136585-76136919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               42, 215
               

               Conread position:
               57-379
               

               Cow position:
               chr3:23204411-23204075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 92
               

               Conread position:
               57-383
               

               Cow position:
               chr3:68402188-68401841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               57-402
               

               Cow position:
               chr3:26722545-26722196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               117, 238
               

               Conread position:
               58-296
               

               Cow position:
               chr3:16635240-16635489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               135, 215
               

               Conread position:
               58-309
               

               Cow position:
               chr3:9639746-9639500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 154
               

               Conread position:
               58-331
               

               Cow position:
               chr3:43529134-43528846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               75, 90
               

               Conread position:
               59-301
               

               Cow position:
               chr3:20141193-20141444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               80, 92
               

               Conread position:
               59-309
               

               Cow position:
               chr3:27299268-27299016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               149, 7
               

               Conread position:
               59-309
               

               Cow position:
               chr3:77453720-77453970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               111, 17
               

               Conread position:
               61-348
               

               Cow position:
               chr3:7984821-7984526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               127, 190
               

               Conread position:
               62-308
               

               Cow position:
               chr3:35030506-35030245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               63-374
               

               Cow position:
               chr3:31383699-31383394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               156, 9
               

               Conread position:
               63-383
               

               Cow position:
               chr3:56494402-56494063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               107, 45
               

               Conread position:
               64-290
               

               Cow position:
               chr3:76709449-76709687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               80, 86
               

               Conread position:
               64-309
               

               Cow position:
               chr3:53047518-53047271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               149, 106
               

               Conread position:
               64-318
               

               Cow position:
               chr3:22512579-22512840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               131, 231
               

               Conread position:
               64-339
               

               Cow position:
               chr3:65961154-65961444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               64-348
               

               Cow position:
               chr3:27223303-27223587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               38, 130
               

               Conread position:
               64-358
               

               Cow position:
               chr3:11018721-11019026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 33
               

               Conread position:
               64-358
               

               Cow position:
               chr3:62754680-62754983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               120, 37
               

               Conread position:
               64-374
               

               Cow position:
               chr3:76901385-76901684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               65-283
               

               Cow position:
               chr3:73305450-73305678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               65-302
               

               Cow position:
               chr3:64690668-64690420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 114
               

               Conread position:
               65-309
               

               Cow position:
               chr3:14466586-14466336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 105
               

               Conread position:
               65-309
               

               Cow position:
               chr3:14613302-14613558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               74, 83
               

               Conread position:
               65-309
               

               Cow position:
               chr3:45699940-45700192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               77, 83
               

               Conread position:
               65-309
               

               Cow position:
               chr3:67283889-67284143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               105, 203
               

               Conread position:
               65-309
               

               Cow position:
               chr3:75158074-75157829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               145, 174
               

               Conread position:
               65-332
               

               Cow position:
               chr3:20781185-20780904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               65-332
               

               Cow position:
               chr3:49121271-49120995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               74, 14
               

               Conread position:
               65-332
               

               Cow position:
               chr3:59864754-59865036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               74, 83
               

               Conread position:
               65-332
               

               Cow position:
               chr3:83911841-83912108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               115, 227
               

               Conread position:
               65-347
               

               Cow position:
               chr3:54788358-54788657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               49, 107
               

               Conread position:
               65-357
               

               Cow position:
               chr3:4031017-4031329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               65-357
               

               Cow position:
               chr3:47209819-47209509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 297
               

               Conread position:
               65-357
               

               Cow position:
               chr3:79595908-79596197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               249, 46
               

               Conread position:
               65-365
               

               Cow position:
               chr3:11961377-11961684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 232
               

               Conread position:
               65-365
               

               Cow position:
               chr3:33469391-33469075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               131, 214
               

               Conread position:
               65-373
               

               Cow position:
               chr3:73956113-73956425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               85, 137
               

               Conread position:
               65-382
               

               Cow position:
               chr3:59118504-59118172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 83
               

               Conread position:
               66-189
               

               Cow position:
               chr3:14546436-14546561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 82
               

               Conread position:
               66-195
               

               Cow position:
               chr3:24326444-24326316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               66-283
               

               Cow position:
               chr3:30351551-30351780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-284
               

               Cow position:
               chr3:12785288-12785058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               66-286
               

               Cow position:
               chr3:20074363-20074595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-287
               

               Cow position:
               chr3:26787286-26787508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               66-289
               

               Cow position:
               chr3:20578551-20578324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               116, 11
               

               Conread position:
               66-291
               

               Cow position:
               chr3:14922332-14922560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               128, 204
               

               Conread position:
               66-303
               

               Cow position:
               chr3:49999411-49999660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               108, 242
               

               Conread position:
               66-305
               

               Cow position:
               chr3:73513413-73513172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               130, 73
               

               Conread position:
               66-309
               

               Cow position:
               chr3:2866379-2866124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-309
               

               Cow position:
               chr3:53158650-53158894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               66-309
               

               Cow position:
               chr3:55190588-55190344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               56, 85
               

               Conread position:
               66-314
               

               Cow position:
               chr3:22044884-22044630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               66-314
               

               Cow position:
               chr3:51256213-51256474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               66-324
               

               Cow position:
               chr3:70200053-70200309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               137, 72
               

               Conread position:
               66-327
               

               Cow position:
               chr3:58025758-58025489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               66-329
               

               Cow position:
               chr3:4135706-4135428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-329
               

               Cow position:
               chr3:14212666-14212944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-329
               

               Cow position:
               chr3:24265474-24265751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               107, 217
               

               Conread position:
               66-329
               

               Cow position:
               chr3:30752859-30753136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               107, 209
               

               Conread position:
               66-329
               

               Cow position:
               chr3:35109502-35109780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-329
               

               Cow position:
               chr3:43316973-43316708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 177
               

               Conread position:
               66-329
               

               Cow position:
               chr3:43525464-43525186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               66-329
               

               Cow position:
               chr3:49976251-49975975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               66-329
               

               Cow position:
               chr3:58336582-58336860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-329
               

               Cow position:
               chr3:70250128-70249860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 81
               

               Conread position:
               66-329
               

               Cow position:
               chr3:78520323-78520602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:1622376-1622655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:2075056-2075335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:11417822-11418101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:14922928-14923206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 82
               

               Conread position:
               66-330
               

               Cow position:
               chr3:28765136-28764868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               108, 153
               

               Conread position:
               66-330
               

               Cow position:
               chr3:28922271-28922550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:30329393-30329115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:34015687-34015966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:35612422-35612701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:36417015-36417294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:37894107-37894384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 200
               

               Conread position:
               66-330
               

               Cow position:
               chr3:49605166-49604892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               107, 86
               

               Conread position:
               66-330
               

               Cow position:
               chr3:49610931-49610661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 65
               

               Conread position:
               66-330
               

               Cow position:
               chr3:52150010-52149731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               73, 81
               

               Conread position:
               66-330
               

               Cow position:
               chr3:75771859-75771580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-330
               

               Cow position:
               chr3:77697199-77696928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               98, 79
               

               Conread position:
               66-330
               

               Cow position:
               chr3:80741146-80741425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               66-331
               

               Cow position:
               chr3:34503858-34503583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               108, 26
               

               Conread position:
               66-332
               

               Cow position:
               chr3:2572803-2573084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:6024583-6024302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:6170747-6171028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:6529268-6529549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:6838305-6838589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:6884420-6884702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:12932042-12932323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:13035220-13034939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:15416742-15417023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:18862716-18862994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               108, 181
               

               Conread position:
               66-332
               

               Cow position:
               chr3:19881325-19881606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:21779502-21779221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:26891766-26892047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:34037244-34037525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:35043435-35043716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:38747656-38747937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:39231987-39232268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:40205679-40205959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:45675502-45675221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:49564292-49564573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:50217267-50217548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:52045744-52045463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:55245819-55246100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:65536390-65536671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-332
               

               Cow position:
               chr3:76864707-76864988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               66-339
               

               Cow position:
               chr3:23217058-23216768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               66-342
               

               Cow position:
               chr3:63273415-63273714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 130
               

               Conread position:
               66-344
               

               Cow position:
               chr3:64376435-64376150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               66-347
               

               Cow position:
               chr3:49297018-49297310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               119, 81
               

               Conread position:
               66-348
               

               Cow position:
               chr3:20225271-20224982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               131, 48
               

               Conread position:
               66-357
               

               Cow position:
               chr3:2627440-2627733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               121, 10
               

               Conread position:
               66-357
               

               Cow position:
               chr3:62793806-62793507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               147, 114
               

               Conread position:
               66-357
               

               Cow position:
               chr3:66047770-66047478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               66-357
               

               Cow position:
               chr3:81374976-81374670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 82
               

               Conread position:
               66-360
               

               Cow position:
               chr3:16884042-16883749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               129, 190
               

               Conread position:
               66-360
               

               Cow position:
               chr3:52513735-52514035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               123, 188
               

               Conread position:
               66-360
               

               Cow position:
               chr3:55129625-55129935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               66-365
               

               Cow position:
               chr3:16716560-16716248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               66-365
               

               Cow position:
               chr3:76610053-76610351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 74
               

               Conread position:
               66-365
               

               Cow position:
               chr3:78625555-78625856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               66-367
               

               Cow position:
               chr3:29282035-29282345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 229
               

               Conread position:
               66-373
               

               Cow position:
               chr3:9665677-9665355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               66-373
               

               Cow position:
               chr3:20795569-20795891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               66-373
               

               Cow position:
               chr3:36861828-36861509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               66-373
               

               Cow position:
               chr3:64293796-64294107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               73, 82
               

               Conread position:
               66-383
               

               Cow position:
               chr3:24909063-24909394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               67-293
               

               Cow position:
               chr3:12254315-12254553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               67-308
               

               Cow position:
               chr3:46014406-46014160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               149, 45
               

               Conread position:
               67-309
               

               Cow position:
               chr3:74083434-74083680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               128, 22
               

               Conread position:
               67-309
               

               Cow position:
               chr3:82352079-82352330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               67-317
               

               Cow position:
               chr3:38254916-38255167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               92, 113
               

               Conread position:
               67-329
               

               Cow position:
               chr3:83767522-83767798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 80
               

               Conread position:
               67-346
               

               Cow position:
               chr3:58207573-58207289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 18
               

               Conread position:
               67-349
               

               Cow position:
               chr3:18787806-18788110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               67-351
               

               Cow position:
               chr3:72376510-72376800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               149, 18
               

               Conread position:
               67-365
               

               Cow position:
               chr3:72776375-72776678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 81
               

               Conread position:
               67-373
               

               Cow position:
               chr3:322588-322268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               128, 177
               

               Conread position:
               67-373
               

               Cow position:
               chr3:31418810-31419124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 118
               

               Conread position:
               68-290
               

               Cow position:
               chr3:63138997-63138760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               68-308
               

               Cow position:
               chr3:13723434-13723182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-309
               

               Cow position:
               chr3:16620478-16620223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-314
               

               Cow position:
               chr3:822812-822554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-314
               

               Cow position:
               chr3:14438710-14438453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               68-314
               

               Cow position:
               chr3:16226152-16226410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-314
               

               Cow position:
               chr3:20379441-20379183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-314
               

               Cow position:
               chr3:41057237-41057495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               68-314
               

               Cow position:
               chr3:69271879-69272137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-329
               

               Cow position:
               chr3:5474817-5475093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-329
               

               Cow position:
               chr3:5989286-5989009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 80
               

               Conread position:
               68-329
               

               Cow position:
               chr3:6714352-6714628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-329
               

               Cow position:
               chr3:6785595-6785867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 18
               

               Conread position:
               68-329
               

               Cow position:
               chr3:31021958-31022228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               68-329
               

               Cow position:
               chr3:35918837-35919113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               68-329
               

               Cow position:
               chr3:37020938-37020670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               68-329
               

               Cow position:
               chr3:41207288-41207011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-329
               

               Cow position:
               chr3:79668388-79668664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-330
               

               Cow position:
               chr3:13248746-13248466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               68-331
               

               Cow position:
               chr3:19958872-19959150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               68-331
               

               Cow position:
               chr3:58444103-58443827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 80
               

               Conread position:
               68-332
               

               Cow position:
               chr3:3552594-3552868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 254
               

               Conread position:
               68-332
               

               Cow position:
               chr3:6442346-6442623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               116, 204
               

               Conread position:
               68-335
               

               Cow position:
               chr3:30615663-30615384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 80
               

               Conread position:
               68-335
               

               Cow position:
               chr3:80929994-80929721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               145, 180
               

               Conread position:
               68-346
               

               Cow position:
               chr3:47078335-47078042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               68-354
               

               Cow position:
               chr3:7245828-7245527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 179
               

               Conread position:
               68-354
               

               Cow position:
               chr3:28435421-28435126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               119, 176
               

               Conread position:
               68-354
               

               Cow position:
               chr3:44927091-44927395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               68-354
               

               Cow position:
               chr3:64653946-64654248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               106, 179
               

               Conread position:
               68-354
               

               Cow position:
               chr3:74060747-74061049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               68-357
               

               Cow position:
               chr3:67534094-67534388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               149, 112
               

               Conread position:
               68-362
               

               Cow position:
               chr3:43662524-43662818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               125, 89
               

               Conread position:
               68-362
               

               Cow position:
               chr3:78546981-78546683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               68-365
               

               Cow position:
               chr3:14647664-14647973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               114, 87
               

               Conread position:
               68-365
               

               Cow position:
               chr3:44255321-44255011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 26
               

               Conread position:
               68-398
               

               Cow position:
               chr3:66968602-66968259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               106, 331
               

               Conread position:
               69-240
               

               Cow position:
               chr3:523488-523666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               69-292
               

               Cow position:
               chr3:29130371-29130603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               69-363
               

               Cow position:
               chr3:65581916-65581616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 216
               

               Conread position:
               69-398
               

               Cow position:
               chr3:11278686-11279022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               119, 177
               

               Conread position:
               70-309
               

               Cow position:
               chr3:52636844-52637085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 158
               

               Conread position:
               70-348
               

               Cow position:
               chr3:51539594-51539886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               72-283
               

               Cow position:
               chr3:34027481-34027259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               72-365
               

               Cow position:
               chr3:77745396-77745698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               72-375
               

               Cow position:
               chr3:10668983-10669299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               73-363
               

               Cow position:
               chr3:35077543-35077237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               122, 35
               

               Conread position:
               74-361
               

               Cow position:
               chr3:69441945-69441641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               75-292
               

               Cow position:
               chr3:24904908-24905138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               75-309
               

               Cow position:
               chr3:27212958-27213191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 40
               

               Conread position:
               75-309
               

               Cow position:
               chr3:43232349-43232585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               75-332
               

               Cow position:
               chr3:41019026-41018754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               75-332
               

               Cow position:
               chr3:83699622-83699351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               75-354
               

               Cow position:
               chr3:32619733-32619431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               75-383
               

               Cow position:
               chr3:57977270-57976950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 81
               

               Conread position:
               76-308
               

               Cow position:
               chr3:11659740-11659979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               76-309
               

               Cow position:
               chr3:21652279-21652518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               138, 104
               

               Conread position:
               76-309
               

               Cow position:
               chr3:24621806-24622035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               113, 75
               

               Conread position:
               76-326
               

               Cow position:
               chr3:62896832-62896587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 49
               

               Conread position:
               76-357
               

               Cow position:
               chr3:18594053-18594344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               103, 49
               

               Conread position:
               76-357
               

               Cow position:
               chr3:56153579-56153865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               77-270
               

               Cow position:
               chr3:42993584-42993388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               77-294
               

               Cow position:
               chr3:15747284-15747064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 31
               

               Conread position:
               77-309
               

               Cow position:
               chr3:68295273-68295497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               77-309
               

               Cow position:
               chr3:72603502-72603744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               77-314
               

               Cow position:
               chr3:51490586-51490831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               106, 52
               

               Conread position:
               77-332
               

               Cow position:
               chr3:4080724-4080458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               77-332
               

               Cow position:
               chr3:24275858-24276110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               110, 149
               

               Conread position:
               77-332
               

               Cow position:
               chr3:41654827-41655084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               40, 64
               

               Conread position:
               77-332
               

               Cow position:
               chr3:66847113-66846854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 26
               

               Conread position:
               77-357
               

               Cow position:
               chr3:19028163-19027869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               77-362
               

               Cow position:
               chr3:47691262-47691549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               110, 37
               

               Conread position:
               77-366
               

               Cow position:
               chr3:2295010-2295313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               116, 287
               

               Conread position:
               77-383
               

               Cow position:
               chr3:15570715-15571032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 290
               

               Conread position:
               78-330
               

               Cow position:
               chr3:57660804-57661056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               115, 61
               

               Conread position:
               78-365
               

               Cow position:
               chr3:65204313-65204020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               118, 78
               

               Conread position:
               78-383
               

               Cow position:
               chr3:13886404-13886721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 299
               

               Conread position:
               79-332
               

               Cow position:
               chr3:16005512-16005243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               79-365
               

               Cow position:
               chr3:76926702-76927000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               79-374
               

               Cow position:
               chr3:3845687-3845384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               103, 96
               

               Conread position:
               80-304
               

               Cow position:
               chr3:2475773-2475540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 210
               

               Conread position:
               80-309
               

               Cow position:
               chr3:17787464-17787692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               117, 80
               

               Conread position:
               80-309
               

               Cow position:
               chr3:40004221-40003979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               80-309
               

               Cow position:
               chr3:70890736-70890972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               80-314
               

               Cow position:
               chr3:944982-945230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               80-314
               

               Cow position:
               chr3:7542459-7542691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               80-320
               

               Cow position:
               chr3:18852239-18852478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               80-320
               

               Cow position:
               chr3:70336389-70336155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 68
               

               Conread position:
               80-331
               

               Cow position:
               chr3:48528324-48528580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               80-350
               

               Cow position:
               chr3:200004-200284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 68
               

               Conread position:
               80-350
               

               Cow position:
               chr3:21221676-21221402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 101
               

               Conread position:
               80-350
               

               Cow position:
               chr3:64404639-64404359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               61, 67
               

               Conread position:
               80-353
               

               Cow position:
               chr3:63704891-63705136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               80-357
               

               Cow position:
               chr3:43045194-43045474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               106, 14
               

               Conread position:
               80-358
               

               Cow position:
               chr3:11532091-11532374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               40, 211
               

               Conread position:
               81-353
               

               Cow position:
               chr3:61955391-61955676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               81-357
               

               Cow position:
               chr3:69208840-69208566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               81-365
               

               Cow position:
               chr3:80261553-80261267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               112, 81
               

               Conread position:
               82-350
               

               Cow position:
               chr3:62911569-62911298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               92, 155
               

               Conread position:
               83-314
               

               Cow position:
               chr3:22948498-22948263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               110, 47
               

               Conread position:
               83-332
               

               Cow position:
               chr3:2921923-2922187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               83-342
               

               Cow position:
               chr3:57531425-57531700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               56, 65
               

               Conread position:
               83-358
               

               Cow position:
               chr3:13683806-13684100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               37, 28
               

               Conread position:
               86-272
               

               Cow position:
               chr3:67744261-67744076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               86-354
               

               Cow position:
               chr3:57590627-57590904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               86-362
               

               Cow position:
               chr3:45863640-45863351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               105, 278
               

               Conread position:
               86-373
               

               Cow position:
               chr3:37009447-37009148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               86-374
               

               Cow position:
               chr3:30567409-30567711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               87-309
               

               Cow position:
               chr3:33692715-33692937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               87-309
               

               Cow position:
               chr3:42424204-42423972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               87-314
               

               Cow position:
               chr3:1073895-1074115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               126, 14
               

               Conread position:
               87-332
               

               Cow position:
               chr3:69345688-69345437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 88
               

               Conread position:
               87-358
               

               Cow position:
               chr3:51439581-51439300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               87-361
               

               Cow position:
               chr3:15809797-15810069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 31
               

               Conread position:
               87-373
               

               Cow position:
               chr3:54863324-54863026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 27
               

               Conread position:
               88-276
               

               Cow position:
               chr3:76840238-76840435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 69
               

               Conread position:
               88-286
               

               Cow position:
               chr3:38003524-38003731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               88-306
               

               Cow position:
               chr3:71949398-71949625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               88-332
               

               Cow position:
               chr3:66829648-66829392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               89-299
               

               Cow position:
               chr3:60891563-60891786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               89-309
               

               Cow position:
               chr3:6854304-6854078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               96, 64
               

               Conread position:
               89-309
               

               Cow position:
               chr3:13085242-13085012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 59
               

               Conread position:
               89-324
               

               Cow position:
               chr3:51597226-51597460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               89-325
               

               Cow position:
               chr3:7948784-7948549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               89-332
               

               Cow position:
               chr3:31748975-31749224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               89-342
               

               Cow position:
               chr3:76932601-76932337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               89-348
               

               Cow position:
               chr3:29311446-29311713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 54
               

               Conread position:
               89-348
               

               Cow position:
               chr3:54347110-54346835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               89-354
               

               Cow position:
               chr3:2904159-2903884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               85, 236
               

               Conread position:
               89-358
               

               Cow position:
               chr3:37600029-37600313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 102
               

               Conread position:
               89-358
               

               Cow position:
               chr3:38863018-38863273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               225, 79
               

               Conread position:
               89-365
               

               Cow position:
               chr3:21303286-21303002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               124, 102
               

               Conread position:
               89-365
               

               Cow position:
               chr3:23944263-23944550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               125, 115
               

               Conread position:
               89-365
               

               Cow position:
               chr3:59332882-59333152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               225, 68
               

               Conread position:
               89-371
               

               Cow position:
               chr3:33633740-33633447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               116, 86
               

               Conread position:
               90-299
               

               Cow position:
               chr3:477684-477458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               90-307
               

               Cow position:
               chr3:28634513-28634284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               90-309
               

               Cow position:
               chr3:3884886-3884660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 35
               

               Conread position:
               90-309
               

               Cow position:
               chr3:4991604-4991379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               90-309
               

               Cow position:
               chr3:64215870-64216101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               90-317
               

               Cow position:
               chr3:23012504-23012741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               90-332
               

               Cow position:
               chr3:24638705-24638958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               90-340
               

               Cow position:
               chr3:83948036-83948304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               98, 211
               

               Conread position:
               91-354
               

               Cow position:
               chr3:45981002-45980734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               91-357
               

               Cow position:
               chr3:70289468-70289207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               91-358
               

               Cow position:
               chr3:18575323-18575041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               96, 44
               

               Conread position:
               91-358
               

               Cow position:
               chr3:80582157-80582434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               92-373
               

               Cow position:
               chr3:2024314-2024601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               93, 151
               

               Conread position:
               94-305
               

               Cow position:
               chr3:75839551-75839336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               94-309
               

               Cow position:
               chr3:54959036-54959263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               95-286
               

               Cow position:
               chr3:33326694-33326890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               118, 92
               

               Conread position:
               96-316
               

               Cow position:
               chr3:67021696-67021468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               97-309
               

               Cow position:
               chr3:77550275-77550493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               98-373
               

               Cow position:
               chr3:73936878-73936605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               213, 95
               

               Conread position:
               99-309
               

               Cow position:
               chr3:60151137-60151363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 51
               

               Conread position:
               99-331
               

               Cow position:
               chr3:12755062-12755307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 213
               

               Conread position:
               100-362
               

               Cow position:
               chr3:4691122-4691396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               43, 51
               

               Conread position:
               101-314
               

               Cow position:
               chr3:78665019-78664800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               81, 22
               

               Conread position:
               102-309
               

               Cow position:
               chr3:38346349-38346566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               102-329
               

               Cow position:
               chr3:12982576-12982334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               102-332
               

               Cow position:
               chr3:37151095-37150850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               102-332
               

               Cow position:
               chr3:45748566-45748811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               102-332
               

               Cow position:
               chr3:81058215-81057970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               102-373
               

               Cow position:
               chr3:1034400-1034685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               72, 274
               

               Conread position:
               103-332
               

               Cow position:
               chr3:18759095-18758849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               103-365
               

               Cow position:
               chr3:58727014-58726754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               103-373
               

               Cow position:
               chr3:77187598-77187879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               104-334
               

               Cow position:
               chr3:37949489-37949257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 71
               

               Conread position:
               104-338
               

               Cow position:
               chr3:62611074-62611317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               104-374
               

               Cow position:
               chr3:45691737-45691461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               105-314
               

               Cow position:
               chr3:8922921-8923134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               105-381
               

               Cow position:
               chr3:18410533-18410249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               107-330
               

               Cow position:
               chr3:51602954-51603192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               114-276
               

               Cow position:
               chr3:84290486-84290316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 132
               

               Conread position:
               114-342
               

               Cow position:
               chr3:75176230-75176003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               118-383
               

               Cow position:
               chr3:27526603-27526323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 160
               

               Conread position:
               125-362
               

               Cow position:
               chr3:66272344-66272590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               125-364
               

               Cow position:
               chr3:60254138-60254390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               132-342
               

               Cow position:
               chr3:66043233-66043011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               132-348
               

               Cow position:
               chr3:67044922-67044695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               133-365
               

               Cow position:
               chr3:65877360-65877611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               134-292
               

               Cow position:
               chr3:68503148-68502979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               134-292
               

               Cow position:
               chr3:68504661-68504492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               135-330
               

               Cow position:
               chr3:19692150-19691940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               140-321
               

               Cow position:
               chr3:2431670-2431487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               140-332
               

               Cow position:
               chr3:45097590-45097796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               140-342
               

               Cow position:
               chr3:73211181-73211395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               140-374
               

               Cow position:
               chr3:55108049-55107804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 7
               

               Conread position:
               140-406
               

               Cow position:
               chr3:83761988-83761710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               144-374
               

               Cow position:
               chr3:22946695-22946456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               56, 120
               

               Conread position:
               146-330
               

               Cow position:
               chr3:26801448-26801639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               146-332
               

               Cow position:
               chr3:19978244-19978043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               146-332
               

               Cow position:
               chr3:32769166-32769367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               147-357
               

               Cow position:
               chr3:74132413-74132197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               148-373
               

               Cow position:
               chr3:8330633-8330873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               148-373
               

               Cow position:
               chr3:46260726-46260966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               150-365
               

               Cow position:
               chr3:50344981-50344759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 214
               

               Conread position:
               153-308
               

               Cow position:
               chr3:35298967-35298807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               157-309
               

               Cow position:
               chr3:30003688-30003846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 7
               

               Conread position:
               157-374
               

               Cow position:
               chr3:56124932-56125164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 149
               

               Conread position:
               162-292
               

               Cow position:
               chr3:56577554-56577421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               176-329
               

               Cow position:
               chr3:49389708-49389545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               176-330
               

               Cow position:
               chr3:70730690-70730854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               176-332
               

               Cow position:
               chr3:29461794-29461628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               176-332
               

               Cow position:
               chr3:32356141-32356307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               187-357
               

               Cow position:
               chr3:16886972-16886800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               129, 8
               

               Conread position:
               200-360
               

               Cow position:
               chr3:11789386-11789550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               200-373
               

               Cow position:
               chr3:7563172-7562995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 144
               

               Conread position:
               206-362
               

               Cow position:
               chr3:53568224-53568380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 29
               

               Conread position:
               207-342
               

               Cow position:
               chr3:24308410-24308548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               207-362
               

               Cow position:
               chr3:72909853-72910010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 95
               

               Conread position:
               207-372
               

               Cow position:
               chr3:39234110-39234284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               208-342
               

               Cow position:
               chr3:8074361-8074496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               108, 27
               

               Conread position:
               211-358
               

               Cow position:
               chr3:74753836-74753978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               211-385
               

               Cow position:
               chr3:7787870-7787690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 90
               

               Conread position:
               212-342
               

               Cow position:
               chr3:10932349-10932482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               212-373
               

               Cow position:
               chr3:52150679-52150515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               216-375
               

               Cow position:
               chr3:74140453-74140290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               219-329
               

               Cow position:
               chr3:28669252-28669139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               219-330
               

               Cow position:
               chr3:24558135-24558021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               219-330
               

               Cow position:
               chr3:32412126-32412012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               219-330
               

               Cow position:
               chr3:35342426-35342312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               219-365
               

               Cow position:
               chr3:68617067-68617219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               219-373
               

               Cow position:
               chr3:28871732-28871575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               220-373
               

               Cow position:
               chr3:73459497-73459653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               225-357
               

               Cow position:
               chr3:77623642-77623777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 69
               
Show alignments to all cow chromosomes.
Conread position:	27-360
Cow position:	chr3:12334501-12334165 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	217
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	105, 27
Conread position:	33-335
Cow position:	chr3:22867726-22867415 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	210
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	11, 63
Conread position:	33-373
Cow position:	chr3:27090949-27090603 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	245
Alignm E-value:	0
Alignm gaps (pig, cow):	161, 8
Conread position:	35-304
Cow position:	chr3:57968386-57968661 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	187
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	160, 29
Conread position:	35-314
Cow position:	chr3:26660721-26660436 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	202
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	155, 95
Conread position:	37-309
Cow position:	chr3:24585983-24585697 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	190
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	148, 14
Conread position:	37-362
Cow position:	chr3:7740184-7739845 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	243
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	23, 29
Conread position:	38-206
Cow position:	chr3:26596278-26596447 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	123
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	106, 13
Conread position:	38-309
Cow position:	chr3:77448233-77448503 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	182
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	22, 13
Conread position:	38-314
Cow position:	chr3:61677784-61678069 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	199
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	98, 13
Conread position:	39-276
Cow position:	chr3:20999822-20999574 (view UCSC Genome Browser custom track)
Alignm length:	250
Alignm identity:	170
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	146, 12
Conread position:	39-309
Cow position:	chr3:17937768-17937488 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	199
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	96, 18
Conread position:	39-314
Cow position:	chr3:55374325-55374615 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	198
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	164, 12
Conread position:	39-330
Cow position:	chr3:34393037-34392735 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	205
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	95, 17
Conread position:	39-332
Cow position:	chr3:30321506-30321801 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	216
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	100, 18
Conread position:	39-342
Cow position:	chr3:4039684-4039369 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	214
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	100, 12
Conread position:	39-357
Cow position:	chr3:26567025-26567356 (view UCSC Genome Browser custom track)
Alignm length:	335
Alignm identity:	230
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	44, 18
Conread position:	39-358
Cow position:	chr3:56148545-56148875 (view UCSC Genome Browser custom track)
Alignm length:	335
Alignm identity:	227
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	100, 17
Conread position:	39-361
Cow position:	chr3:31934088-31933751 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	225
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	147, 26
Conread position:	39-365
Cow position:	chr3:52651705-52651365 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	222
Alignm E-value:	9e-28
Alignm gaps (pig, cow):	146, 12