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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8047L06.3
        

               
Conread position:
               
6-342
               

               
Cow position:
               
chr4:42320885-42320538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
24-328
               

               
Cow position:
               
chr4:52017810-52017496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
33-342
               

               
Cow position:
               
chr4:13879235-13879555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
34-373
               

               
Cow position:
               
chr4:21364297-21364646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
151, 107
               

               
Conread position:
               
36-332
               

               
Cow position:
               
chr4:8030802-8030498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
37-309
               

               
Cow position:
               
chr4:30403491-30403763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
37-360
               

               
Cow position:
               
chr4:43046073-43045751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
37-371
               

               
Cow position:
               
chr4:17477350-17477685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
38-309
               

               
Cow position:
               
chr4:43840926-43840645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
39-309
               

               
Cow position:
               
chr4:19237122-19237402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
39-309
               

               
Cow position:
               
chr4:27539718-27539999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
39-314
               

               
Cow position:
               
chr4:5441606-5441320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
39-314
               

               
Cow position:
               
chr4:22904736-22905014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
39-329
               

               
Cow position:
               
chr4:44778137-44777832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
39-330
               

               
Cow position:
               
chr4:46711551-46711244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
39-332
               

               
Cow position:
               
chr4:2601264-2601561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
39-357
               

               
Cow position:
               
chr4:8769097-8769421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
40-299
               

               
Cow position:
               
chr4:54147375-54147107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
40-309
               

               
Cow position:
               
chr4:20789842-20790123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
40-314
               

               
Cow position:
               
chr4:29528203-29527931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
40-335
               

               
Cow position:
               
chr4:49740586-49740897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
40-375
               

               
Cow position:
               
chr4:34224459-34224803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
40-383
               

               
Cow position:
               
chr4:29072881-29072539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
42-358
               

               
Cow position:
               
chr4:47136675-47136995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
43-292
               

               
Cow position:
               
chr4:4242088-4242341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
148, 102
               

               
Conread position:
               
43-309
               

               
Cow position:
               
chr4:19418043-19418319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 247
               

               
Conread position:
               
43-309
               

               
Cow position:
               
chr4:45303414-45303145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
163, 58
               

               
Conread position:
               
43-309
               

               
Cow position:
               
chr4:58161933-58161661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
43-314
               

               
Cow position:
               
chr4:36666328-36666041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 257
               

               
Conread position:
               
43-332
               

               
Cow position:
               
chr4:42863227-42863519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
43-332
               

               
Cow position:
               
chr4:43235165-43234872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
43-334
               

               
Cow position:
               
chr4:60718732-60719026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
43-348
               

               
Cow position:
               
chr4:68635403-68635092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
157, 142
               

               
Conread position:
               
43-354
               

               
Cow position:
               
chr4:42639239-42638921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 196
               

               
Conread position:
               
43-357
               

               
Cow position:
               
chr4:35929541-35929856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 105
               

               
Conread position:
               
43-358
               

               
Cow position:
               
chr4:21139916-21140239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
154, 13
               

               
Conread position:
               
43-362
               

               
Cow position:
               
chr4:39233631-39233301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
43-365
               

               
Cow position:
               
chr4:49886233-49885893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
153, 46
               

               
Conread position:
               
43-365
               

               
Cow position:
               
chr4:52252566-52252898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
43-375
               

               
Cow position:
               
chr4:52696308-52696647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
44-281
               

               
Cow position:
               
chr4:18813150-18812902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
44-314
               

               
Cow position:
               
chr4:68066411-68066685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
145, 139
               

               
Conread position:
               
44-330
               

               
Cow position:
               
chr4:54162004-54161707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 255
               

               
Conread position:
               
44-342
               

               
Cow position:
               
chr4:606664-606977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
44-381
               

               
Cow position:
               
chr4:17877017-17877368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
46-269
               

               
Cow position:
               
chr4:13500922-13500686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
47-310
               

               
Cow position:
               
chr4:3368914-3369192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
48-262
               

               
Cow position:
               
chr4:49893360-49893568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
48-357
               

               
Cow position:
               
chr4:36899440-36899763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 100
               

               
Conread position:
               
48-362
               

               
Cow position:
               
chr4:49031752-49032076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
48-383
               

               
Cow position:
               
chr4:59119043-59118708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
165, 132
               

               
Conread position:
               
50-268
               

               
Cow position:
               
chr4:23451951-23451731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
50-298
               

               
Cow position:
               
chr4:22492340-22492591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
155, 114
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr4:4924208-4923913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
50-330
               

               
Cow position:
               
chr4:19264735-19265015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr4:68795769-68796096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
92, 299
               

               
Conread position:
               
50-371
               

               
Cow position:
               
chr4:59889511-59889161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
51-206
               

               
Cow position:
               
chr4:45993288-45993445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
51-261
               

               
Cow position:
               
chr4:3971454-3971670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 74
               

               
Conread position:
               
51-284
               

               
Cow position:
               
chr4:20243221-20243467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 98
               

               
Conread position:
               
51-292
               

               
Cow position:
               
chr4:61449578-61449835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
51-307
               

               
Cow position:
               
chr4:11100531-11100269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr4:1368999-1368738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr4:17068047-17067777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr4:27996839-27997103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr4:28612956-28613214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr4:37786366-37786635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr4:49828296-49828553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 6
               

               
Conread position:
               
51-314
               

               
Cow position:
               
chr4:41601987-41602246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
51-315
               

               
Cow position:
               
chr4:48753155-48753435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
51-329
               

               
Cow position:
               
chr4:18335885-18335588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
51-332
               

               
Cow position:
               
chr4:23150591-23150298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
51-332
               

               
Cow position:
               
chr4:60855825-60856122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
51-334
               

               
Cow position:
               
chr4:55954441-55954728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
51-344
               

               
Cow position:
               
chr4:7214710-7214417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
166, 182
               

               
Conread position:
               
51-357
               

               
Cow position:
               
chr4:10884705-10885024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
51-357
               

               
Cow position:
               
chr4:16735378-16735697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
134, 228
               

               
Conread position:
               
51-357
               

               
Cow position:
               
chr4:44733685-44734003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
51-365
               

               
Cow position:
               
chr4:17833780-17833454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
123, 119
               

               
Conread position:
               
51-365
               

               
Cow position:
               
chr4:27288042-27287712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
51-381
               

               
Cow position:
               
chr4:61400286-61399946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
52-189
               

               
Cow position:
               
chr4:40437195-40437061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
56-356
               

               
Cow position:
               
chr4:14186671-14186977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
57-196
               

               
Cow position:
               
chr4:22074027-22073888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-267
               

               
Cow position:
               
chr4:6266144-6265922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
57-271
               

               
Cow position:
               
chr4:6487296-6487070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-281
               

               
Cow position:
               
chr4:16363272-16363508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-283
               

               
Cow position:
               
chr4:3170352-3170590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
57-286
               

               
Cow position:
               
chr4:44593330-44593090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
119, 157
               

               
Conread position:
               
57-304
               

               
Cow position:
               
chr4:29034681-29034935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr4:48543812-48543554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
138, 82
               

               
Conread position:
               
57-307
               

               
Cow position:
               
chr4:3961824-3961565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-308
               

               
Cow position:
               
chr4:66174249-66173991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
132, 241
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:2263632-2263375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:3354870-3354610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:16967230-16966973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
88, 94
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:19957097-19957363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:23508271-23508532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:25983360-25983612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
157, 48
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:31562159-31561898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:34384337-34384079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:41097046-41097303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:43316577-43316313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:46530180-46529917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
116, 30
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:47269239-47269503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:54189837-54190100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
57-309
               

               
Cow position:
               
chr4:67394299-67394544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
57-314
               

               
Cow position:
               
chr4:4379445-4379714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-314
               

               
Cow position:
               
chr4:26325591-26325859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
57-314
               

               
Cow position:
               
chr4:35868266-35868538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
57-319
               

               
Cow position:
               
chr4:11108014-11107742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
57-329
               

               
Cow position:
               
chr4:41961968-41962255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr4:2226692-2226405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 222
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr4:20656990-20656704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr4:33399401-33399116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 273
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr4:34712889-34713171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr4:47263849-47264137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
57-331
               

               
Cow position:
               
chr4:33020560-33020272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
117, 243
               

               
Conread position:
               
57-331
               

               
Cow position:
               
chr4:46667731-46668013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
57-331
               

               
Cow position:
               
chr4:67652360-67652075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:358952-359244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:10044695-10044407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:11918880-11918590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:26745589-26745868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:27177898-27178186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:30573030-30573320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:53316965-53316675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:54758183-54757902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:54931540-54931267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 68
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:57987817-57988105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr4:64874955-64874667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-333
               

               
Cow position:
               
chr4:25596413-25596123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-334
               

               
Cow position:
               
chr4:4086298-4086012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
131, 221
               

               
Conread position:
               
57-342
               

               
Cow position:
               
chr4:33069767-33069470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
57-345
               

               
Cow position:
               
chr4:16641890-16642189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-346
               

               
Cow position:
               
chr4:4419122-4419422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
133, 90
               

               
Conread position:
               
57-347
               

               
Cow position:
               
chr4:20616646-20616341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
57-348
               

               
Cow position:
               
chr4:1061794-1061500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
57-348
               

               
Cow position:
               
chr4:8649145-8649454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
57-349
               

               
Cow position:
               
chr4:47752398-47752696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
57-351
               

               
Cow position:
               
chr4:23380957-23380640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 155
               

               
Conread position:
               
57-354
               

               
Cow position:
               
chr4:1006964-1007279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
57-354
               

               
Cow position:
               
chr4:36754857-36755146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
262, 57
               

               
Conread position:
               
57-354
               

               
Cow position:
               
chr4:43898813-43898509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 208
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr4:3449874-3450185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr4:16832478-16832167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr4:26399859-26400159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
253, 91
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr4:33496631-33496946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr4:39421667-39421982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr4:46526146-46526440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
57-357
               

               
Cow position:
               
chr4:48029930-48030242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-358
               

               
Cow position:
               
chr4:55670316-55670628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
57-362
               

               
Cow position:
               
chr4:1983976-1984292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
136, 94
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:1462332-1462017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:5882547-5882874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:10553317-10553624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:25972004-25972330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:39457741-39458064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:43476719-43476398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:48153238-48152929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
156, 131
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:49744743-49745070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-365
               

               
Cow position:
               
chr4:49886392-49886699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 237
               

               
Conread position:
               
57-367
               

               
Cow position:
               
chr4:12033415-12033735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
57-373
               

               
Cow position:
               
chr4:29530385-29530056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-373
               

               
Cow position:
               
chr4:61242351-61242671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-374
               

               
Cow position:
               
chr4:26874836-26874504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-379
               

               
Cow position:
               
chr4:2191222-2190889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
57-405
               

               
Cow position:
               
chr4:60651663-60652015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
57-406
               

               
Cow position:
               
chr4:67383349-67383697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
58-309
               

               
Cow position:
               
chr4:7806241-7806504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
131, 192
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr4:44046588-44046872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
31, 227
               

               
Conread position:
               
58-332
               

               
Cow position:
               
chr4:18973567-18973854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
58-358
               

               
Cow position:
               
chr4:1500018-1499708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
58-365
               

               
Cow position:
               
chr4:48496750-48497073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
58-373
               

               
Cow position:
               
chr4:36026198-36025868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
81, 90
               

               
Conread position:
               
58-377
               

               
Cow position:
               
chr4:57573347-57573676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
59-339
               

               
Cow position:
               
chr4:51980227-51980518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
59-371
               

               
Cow position:
               
chr4:56226019-56226339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
60-354
               

               
Cow position:
               
chr4:68060415-68060726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
61-332
               

               
Cow position:
               
chr4:43896421-43896135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
62-362
               

               
Cow position:
               
chr4:28150651-28150959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
146, 5
               

               
Conread position:
               
64-314
               

               
Cow position:
               
chr4:45917959-45918218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
64-329
               

               
Cow position:
               
chr4:3801211-3800930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
64-360
               

               
Cow position:
               
chr4:21056316-21056614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 127
               

               
Conread position:
               
64-362
               

               
Cow position:
               
chr4:57205704-57206006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
64-365
               

               
Cow position:
               
chr4:36906183-36906495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
65-273
               

               
Cow position:
               
chr4:11872769-11872551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
65-300
               

               
Cow position:
               
chr4:59316901-59316661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
65-309
               

               
Cow position:
               
chr4:3252470-3252216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
65-309
               

               
Cow position:
               
chr4:12238154-12237913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 79
               

               
Conread position:
               
65-309
               

               
Cow position:
               
chr4:39645832-39646070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
65-309
               

               
Cow position:
               
chr4:62000371-62000128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
130, 137
               

               
Conread position:
               
65-332
               

               
Cow position:
               
chr4:43884173-43884455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
65-339
               

               
Cow position:
               
chr4:9712804-9713082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
65-342
               

               
Cow position:
               
chr4:61236068-61235779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
65-345
               

               
Cow position:
               
chr4:20586277-20585988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
119, 204
               

               
Conread position:
               
65-357
               

               
Cow position:
               
chr4:22014340-22014037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
65-357
               

               
Cow position:
               
chr4:65918760-65919053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
65-358
               

               
Cow position:
               
chr4:22850595-22850291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr4:9391749-9391462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
282, 60
               

               
Conread position:
               
65-365
               

               
Cow position:
               
chr4:8858364-8858663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
65-365
               

               
Cow position:
               
chr4:10541160-10540846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
65-373
               

               
Cow position:
               
chr4:18844878-18845193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
120, 177
               

               
Conread position:
               
65-373
               

               
Cow position:
               
chr4:42480317-42480632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
65-374
               

               
Cow position:
               
chr4:5914407-5914725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
119, 202
               

               
Conread position:
               
66-182
               

               
Cow position:
               
chr4:32438437-32438552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
66-206
               

               
Cow position:
               
chr4:63852592-63852453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
66-209
               

               
Cow position:
               
chr4:42923102-42922959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
66-211
               

               
Cow position:
               
chr4:51961005-51960862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 73
               

               
Conread position:
               
66-273
               

               
Cow position:
               
chr4:19049342-19049561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
66-279
               

               
Cow position:
               
chr4:46744333-46744112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
66-287
               

               
Cow position:
               
chr4:50987614-50987837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr4:17751853-17751621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr4:38972706-38972943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 81
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr4:47949258-47949018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-295
               

               
Cow position:
               
chr4:21504041-21503812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
66-298
               

               
Cow position:
               
chr4:62906941-62906696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-300
               

               
Cow position:
               
chr4:18004795-18005041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-305
               

               
Cow position:
               
chr4:66020475-66020725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 206
               

               
Conread position:
               
66-309
               

               
Cow position:
               
chr4:7779481-7779734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 184
               

               
Conread position:
               
66-309
               

               
Cow position:
               
chr4:8700220-8700474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
66-309
               

               
Cow position:
               
chr4:22237337-22237089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 128
               

               
Conread position:
               
66-309
               

               
Cow position:
               
chr4:26548549-26548799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
66-314
               

               
Cow position:
               
chr4:38564613-38564353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:9041027-9041305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:9357319-9357597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:17821611-17821889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:40217919-40218197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:60224794-60224519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:62453907-62453629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr4:62962279-62962004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:652108-652387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:10403634-10403355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:10424573-10424837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 153
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:15617775-15618054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:15802758-15802479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:18331167-18331446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:21342154-21342433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:24139954-24140235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:24179397-24179118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:26131239-26131518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:30474460-30474740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:35144464-35144185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:47115917-47116196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:60580049-60579770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr4:64155809-64156088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr4:6547608-6547327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr4:7139285-7139004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr4:14684292-14684573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr4:15055884-15056165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr4:21045080-21044802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
108, 229
               

               
Conread position:
               
66-332
               

               
Cow position:
               
chr4:31534914-31535177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
249, 127
               

               
Conread position:
               
66-342
               

               
Cow position:
               
chr4:33171237-33171528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-342
               

               
Cow position:
               
chr4:37956069-37955780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
66-342
               

               
Cow position:
               
chr4:66128187-66127896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
66-354
               

               
Cow position:
               
chr4:45078994-45078697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 82
               

               
Conread position:
               
66-357
               

               
Cow position:
               
chr4:4850422-4850728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
66-358
               

               
Cow position:
               
chr4:22361877-22361577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
66-372
               

               
Cow position:
               
chr4:51024240-51024551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
66-373
               

               
Cow position:
               
chr4:120609-120287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
66-373
               

               
Cow position:
               
chr4:58485384-58485068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
66-373
               

               
Cow position:
               
chr4:63195498-63195180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
66-373
               

               
Cow position:
               
chr4:65198720-65198398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
67-291
               

               
Cow position:
               
chr4:10838265-10838027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 204
               

               
Conread position:
               
67-292
               

               
Cow position:
               
chr4:36827835-36828071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr4:10614112-10613881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr4:65416098-65415856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr4:50977837-50978085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 226
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr4:60953048-60952797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr4:65816577-65816335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 68
               

               
Conread position:
               
67-314
               

               
Cow position:
               
chr4:18185050-18185302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
67-355
               

               
Cow position:
               
chr4:22025007-22024720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
67-357
               

               
Cow position:
               
chr4:64180995-64180695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 172
               

               
Conread position:
               
67-358
               

               
Cow position:
               
chr4:11104612-11104322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
67-358
               

               
Cow position:
               
chr4:42960756-42961039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
67-373
               

               
Cow position:
               
chr4:32249576-32249894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
68-309
               

               
Cow position:
               
chr4:18107924-18108180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
68-309
               

               
Cow position:
               
chr4:21857262-21857012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 28
               

               
Conread position:
               
68-309
               

               
Cow position:
               
chr4:29134647-29134403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
68-309
               

               
Cow position:
               
chr4:61817321-61817068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-314
               

               
Cow position:
               
chr4:1927552-1927294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:3128938-3129214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:8677884-8678160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:10122489-10122765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 80
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:17033418-17033142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:47798184-47798455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
68-329
               

               
Cow position:
               
chr4:54695948-54695674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
68-330
               

               
Cow position:
               
chr4:17235104-17235379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
68-330
               

               
Cow position:
               
chr4:48732759-48733036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-332
               

               
Cow position:
               
chr4:27337298-27337573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 78
               

               
Conread position:
               
68-332
               

               
Cow position:
               
chr4:67767502-67767781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-335
               

               
Cow position:
               
chr4:23544633-23544912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
68-342
               

               
Cow position:
               
chr4:162163-162452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-342
               

               
Cow position:
               
chr4:58291823-58292102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
146, 30
               

               
Conread position:
               
68-345
               

               
Cow position:
               
chr4:38583963-38584251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
68-362
               

               
Cow position:
               
chr4:23889115-23888811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
146, 299
               

               
Conread position:
               
68-365
               

               
Cow position:
               
chr4:6445844-6446158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
68-367
               

               
Cow position:
               
chr4:31635423-31635109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
76, 80
               

               
Conread position:
               
68-373
               

               
Cow position:
               
chr4:14163869-14164189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr4:533375-533650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
72-365
               

               
Cow position:
               
chr4:39934808-39935113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
75-330
               

               
Cow position:
               
chr4:45114301-45114031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
75-365
               

               
Cow position:
               
chr4:43069895-43070203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 196
               

               
Conread position:
               
76-330
               

               
Cow position:
               
chr4:27655178-27655447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
76-332
               

               
Cow position:
               
chr4:29560438-29560167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
76-341
               

               
Cow position:
               
chr4:56303155-56303422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
77-280
               

               
Cow position:
               
chr4:50604262-50604461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
77-300
               

               
Cow position:
               
chr4:61272498-61272264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr4:46044226-46043991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
77-326
               

               
Cow position:
               
chr4:33443510-33443258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
77-350
               

               
Cow position:
               
chr4:39511074-39510793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
77-360
               

               
Cow position:
               
chr4:7583313-7583608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
77-365
               

               
Cow position:
               
chr4:37703408-37703707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
78-305
               

               
Cow position:
               
chr4:26671610-26671380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
78-342
               

               
Cow position:
               
chr4:43658115-43658386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
78-359
               

               
Cow position:
               
chr4:45954120-45953826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
78-401
               

               
Cow position:
               
chr4:6631213-6630879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 202
               

               
Conread position:
               
79-331
               

               
Cow position:
               
chr4:13651699-13651958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
80-206
               

               
Cow position:
               
chr4:28848385-28848515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
80-292
               

               
Cow position:
               
chr4:5200697-5200479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 94
               

               
Conread position:
               
80-301
               

               
Cow position:
               
chr4:24484177-24484395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
80-309
               

               
Cow position:
               
chr4:1309260-1309496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
80-374
               

               
Cow position:
               
chr4:45764894-45764585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 228
               

               
Conread position:
               
81-275
               

               
Cow position:
               
chr4:52717988-52717789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
122, 99
               

               
Conread position:
               
81-342
               

               
Cow position:
               
chr4:60785594-60785869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 67
               

               
Conread position:
               
81-401
               

               
Cow position:
               
chr4:22354050-22354378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
82-342
               

               
Cow position:
               
chr4:45499268-45499526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
83-373
               

               
Cow position:
               
chr4:46585809-46585504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
86-249
               

               
Cow position:
               
chr4:38932414-38932579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 126
               

               
Conread position:
               
86-370
               

               
Cow position:
               
chr4:67757144-67757419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
228, 9
               

               
Conread position:
               
87-306
               

               
Cow position:
               
chr4:23647673-23647447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
87-309
               

               
Cow position:
               
chr4:11193060-11193296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
87-309
               

               
Cow position:
               
chr4:31349064-31348832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 35
               

               
Conread position:
               
87-309
               

               
Cow position:
               
chr4:67600572-67600343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
87-332
               

               
Cow position:
               
chr4:1028122-1027864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
89-309
               

               
Cow position:
               
chr4:30171251-30171023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
89-330
               

               
Cow position:
               
chr4:33181182-33180938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 142
               

               
Conread position:
               
89-331
               

               
Cow position:
               
chr4:18099842-18099581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
89-331
               

               
Cow position:
               
chr4:68362093-68362340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
89-335
               

               
Cow position:
               
chr4:47774489-47774226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
89-357
               

               
Cow position:
               
chr4:4185279-4185554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
89-357
               

               
Cow position:
               
chr4:50809152-50809439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
89-362
               

               
Cow position:
               
chr4:9649178-9649458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
89-364
               

               
Cow position:
               
chr4:15873536-15873257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
89-365
               

               
Cow position:
               
chr4:11390424-11390143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
89-379
               

               
Cow position:
               
chr4:61065775-61066078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
90-309
               

               
Cow position:
               
chr4:5874184-5874403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 108
               

               
Conread position:
               
90-326
               

               
Cow position:
               
chr4:43692063-43691809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 197
               

               
Conread position:
               
90-329
               

               
Cow position:
               
chr4:58688793-58688544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
90-358
               

               
Cow position:
               
chr4:64985707-64985977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
91-267
               

               
Cow position:
               
chr4:14229399-14229209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
91-357
               

               
Cow position:
               
chr4:49067575-49067847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
92-309
               

               
Cow position:
               
chr4:47079304-47079078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
92-339
               

               
Cow position:
               
chr4:45235690-45235428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
93-366
               

               
Cow position:
               
chr4:6155716-6155999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
94-333
               

               
Cow position:
               
chr4:21532468-21532219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
96-374
               

               
Cow position:
               
chr4:19006603-19006896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
97-292
               

               
Cow position:
               
chr4:45872755-45872551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
97-344
               

               
Cow position:
               
chr4:5284729-5284466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 253
               

               
Conread position:
               
100-274
               

               
Cow position:
               
chr4:27907269-27907460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
100-320
               

               
Cow position:
               
chr4:62392424-62392652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
100-365
               

               
Cow position:
               
chr4:32410250-32409973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 144
               

               
Conread position:
               
100-379
               

               
Cow position:
               
chr4:45239466-45239761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 272
               

               
Conread position:
               
101-292
               

               
Cow position:
               
chr4:26008392-26008586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 120
               

               
Conread position:
               
101-358
               

               
Cow position:
               
chr4:43028078-43027812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
101-365
               

               
Cow position:
               
chr4:13140157-13139893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
102-309
               

               
Cow position:
               
chr4:31868401-31868620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
102-314
               

               
Cow position:
               
chr4:16859602-16859380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
102-330
               

               
Cow position:
               
chr4:28855227-28855470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
102-342
               

               
Cow position:
               
chr4:33145974-33146229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
102-346
               

               
Cow position:
               
chr4:38834997-38834738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
102-357
               

               
Cow position:
               
chr4:8378023-8377753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
103-357
               

               
Cow position:
               
chr4:8994255-8994529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 152
               

               
Conread position:
               
104-330
               

               
Cow position:
               
chr4:62120125-62120367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
105-350
               

               
Cow position:
               
chr4:60493367-60493625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
105-357
               

               
Cow position:
               
chr4:35261267-35261000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
105-360
               

               
Cow position:
               
chr4:25228309-25228576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
107-309
               

               
Cow position:
               
chr4:65464914-65464703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
107-339
               

               
Cow position:
               
chr4:34020621-34020867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
108-356
               

               
Cow position:
               
chr4:40957790-40958056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 145
               

               
Conread position:
               
110-354
               

               
Cow position:
               
chr4:54494010-54494267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
111-330
               

               
Cow position:
               
chr4:6231484-6231718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
111-332
               

               
Cow position:
               
chr4:29833749-29833984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr4:36891808-36892048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
113-350
               

               
Cow position:
               
chr4:50677614-50677355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 158
               

               
Conread position:
               
114-349
               

               
Cow position:
               
chr4:22852732-22852970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
115-364
               

               
Cow position:
               
chr4:20615500-20615246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
120-347
               

               
Cow position:
               
chr4:6627336-6627578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
123-304
               

               
Cow position:
               
chr4:47455718-47455537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
123-362
               

               
Cow position:
               
chr4:16828531-16828286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
125-370
               

               
Cow position:
               
chr4:39789959-39790204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
128-332
               

               
Cow position:
               
chr4:24662346-24662138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
128-373
               

               
Cow position:
               
chr4:50025445-50025703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
56, 226
               

               
Conread position:
               
132-329
               

               
Cow position:
               
chr4:53132654-53132454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
132-358
               

               
Cow position:
               
chr4:46541165-46541395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
132-383
               

               
Cow position:
               
chr4:42906933-42907176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr4:25305163-25305383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
133-342
               

               
Cow position:
               
chr4:51014224-51014443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
135-330
               

               
Cow position:
               
chr4:18738594-18738384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
135-373
               

               
Cow position:
               
chr4:19586106-19585853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
139-351
               

               
Cow position:
               
chr4:39262607-39262392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chr4:24002761-24002560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
145-357
               

               
Cow position:
               
chr4:38309925-38309709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
146-309
               

               
Cow position:
               
chr4:37181404-37181242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
146-330
               

               
Cow position:
               
chr4:9375928-9375729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
146-332
               

               
Cow position:
               
chr4:25045562-25045763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
147-324
               

               
Cow position:
               
chr4:994145-993967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
147-347
               

               
Cow position:
               
chr4:60267927-60267723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
148-330
               

               
Cow position:
               
chr4:59838463-59838660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
153-337
               

               
Cow position:
               
chr4:12588761-12588956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 175
               

               
Conread position:
               
153-362
               

               
Cow position:
               
chr4:26911924-26912141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
154-305
               

               
Cow position:
               
chr4:47884833-47884986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
155-363
               

               
Cow position:
               
chr4:42874707-42874920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
155-374
               

               
Cow position:
               
chr4:19226957-19227179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
162-382
               

               
Cow position:
               
chr4:47087858-47087637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
164-358
               

               
Cow position:
               
chr4:11376365-11376566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
176-308
               

               
Cow position:
               
chr4:65539339-65539204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
176-330
               

               
Cow position:
               
chr4:5231605-5231441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
176-330
               

               
Cow position:
               
chr4:30295146-30295310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
176-330
               

               
Cow position:
               
chr4:46744051-46743887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
176-332
               

               
Cow position:
               
chr4:19026176-19026010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
176-332
               

               
Cow position:
               
chr4:31775123-31774957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
176-370
               

               
Cow position:
               
chr4:30407553-30407761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
177-339
               

               
Cow position:
               
chr4:25558287-25558461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
181-309
               

               
Cow position:
               
chr4:13255021-13255157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
184-309
               

               
Cow position:
               
chr4:385019-385144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
199-353
               

               
Cow position:
               
chr4:46358879-46359035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
199-374
               

               
Cow position:
               
chr4:29299317-29299495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
200-309
               

               
Cow position:
               
chr4:44684909-44684800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
200-365
               

               
Cow position:
               
chr4:888301-888471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
204-342
               

               
Cow position:
               
chr4:66184356-66184215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
206-351
               

               
Cow position:
               
chr4:34027304-34027454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
206-354
               

               
Cow position:
               
chr4:6304524-6304677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
207-358
               

               
Cow position:
               
chr4:20860487-20860639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
207-369
               

               
Cow position:
               
chr4:37907673-37907840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
207-376
               

               
Cow position:
               
chr4:22602174-22602002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
212-332
               

               
Cow position:
               
chr4:46020829-46020952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
218-361
               

               
Cow position:
               
chr4:51761751-51761596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
219-330
               

               
Cow position:
               
chr4:50019301-50019187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
219-332
               

               
Cow position:
               
chr4:14047670-14047786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
219-332
               

               
Cow position:
               
chr4:58577421-58577305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
219-342
               

               
Cow position:
               
chr4:18684831-18684705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
219-353
               

               
Cow position:
               
chr4:45993685-45993822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
219-373
               

               
Cow position:
               
chr4:31484468-31484311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
219-373
               

               
Cow position:
               
chr4:45297645-45297802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
220-371
               

               
Cow position:
               
chr4:39847545-39847699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
91, 146
               

               
Conread position:
               
221-358
               

               
Cow position:
               
chr4:21844380-21844520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
221-365
               

               
Cow position:
               
chr4:34340529-34340382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
227-332
               

               
Cow position:
               
chr4:66878185-66878290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.