Cow genome map

Conread name: Ss1.1-Pig4-TMW8047L06.3

Conread position: 20-332
Cow position: chrX:30751887-30752213 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 31

Conread position: 33-196
Cow position: chrX:31804013-31804174 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 53

Conread position: 33-375
Cow position: chrX:23974315-23973964 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 24

Conread position: 34-309
Cow position: chrX:37105321-37105585 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 92

Conread position: 35-357
Cow position: chrX:17158685-17158365 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 25, 99

Conread position: 37-358
Cow position: chrX:11405822-11406145 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 155, 56

Conread position: 37-358
Cow position: chrX:19880127-19880459 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 30

Conread position: 38-281
Cow position: chrX:22538903-22538649 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 101, 13

Conread position: 39-294
Cow position: chrX:12346027-12346293 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 12

Conread position: 39-308
Cow position: chrX:24483232-24482958 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 12

Conread position: 39-309
Cow position: chrX:23341860-23341580 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 100, 18

Conread position: 39-309
Cow position: chrX:27450918-27450648 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 12

Conread position: 39-309
Cow position: chrX:27590899-27590622 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 100, 18

Conread position: 39-309
Cow position: chrX:38852292-38852571 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 146, 18

Conread position: 39-314
Cow position: chrX:24174030-24173748 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 135, 12

Conread position: 39-329
Cow position: chrX:5392444-5392140 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 135, 18

Conread position: 39-329
Cow position: chrX:10445284-10444980 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 12

Conread position: 39-329
Cow position: chrX:19608806-19609111 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 135, 0

Conread position: 39-329
Cow position: chrX:21343526-21343829 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 12

Conread position: 39-330
Cow position: chrX:13928611-13928315 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 175, 12

Conread position: 39-330
Cow position: chrX:16046278-16046583 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 135, 36

Conread position: 39-330
Cow position: chrX:17782631-17782935 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 147, 12

Conread position: 39-331
Cow position: chrX:22811021-22811326 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 18

Conread position: 39-332
Cow position: chrX:23022444-23022751 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 151, 12

Conread position: 39-332
Cow position: chrX:40560409-40560107 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 26

Conread position: 39-354
Cow position: chrX:46296792-46297123 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 12

Conread position: 39-357
Cow position: chrX:2382598-2382930 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 26

Conread position: 39-357
Cow position: chrX:13912224-13912559 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 129, 26

Conread position: 39-357
Cow position: chrX:37488860-37489189 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 12

Conread position: 39-358
Cow position: chrX:31372593-31372926 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 230
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 18

Conread position: 39-362
Cow position: chrX:36839837-36840173 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 148, 12

Conread position: 39-365
Cow position: chrX:4751235-4750897 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 155, 18

Conread position: 39-365
Cow position: chrX:10301263-10301595 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 174, 12

Conread position: 39-365
Cow position: chrX:35388788-35388435 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 134, 18

Conread position: 39-371
Cow position: chrX:19929565-19929913 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 153, 0

Conread position: 39-374
Cow position: chrX:30089915-30089572 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 151, 18

Conread position: 40-308
Cow position: chrX:37453340-37453602 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 150, 24

Conread position: 40-309
Cow position: chrX:160564-160840 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 15

Conread position: 40-309
Cow position: chrX:19595060-19595337 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 16

Conread position: 40-309
Cow position: chrX:28666826-28666540 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 150, 16

Conread position: 40-309
Cow position: chrX:42733004-42733278 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 11

Conread position: 40-314
Cow position: chrX:13069611-13069327 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 143, 8

Conread position: 40-314
Cow position: chrX:13090172-13089888 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 143, 8

Conread position: 40-314
Cow position: chrX:37753545-37753811 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 40-398
Cow position: chrX:42380709-42380340 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 248
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 156, 17

Conread position: 42-365
Cow position: chrX:10440693-10440363 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 37

Conread position: 42-365
Cow position: chrX:18599074-18598741 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 153, 105

Conread position: 43-247
Cow position: chrX:39903360-39903155 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 40

Conread position: 43-290
Cow position: chrX:33583828-33584081 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 53

Conread position: 43-292
Cow position: chrX:41305093-41304836 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 14

Conread position: 43-309
Cow position: chrX:23928040-23927773 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 122, 89

Conread position: 43-340
Cow position: chrX:35935638-35935336 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 148, 14

Conread position: 43-362
Cow position: chrX:2323841-2324173 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 144, 293

Conread position: 43-362
Cow position: chrX:16552941-16553260 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 150, 106

Conread position: 43-362
Cow position: chrX:35028382-35028708 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 226
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 26, 45

Conread position: 43-369
Cow position: chrX:7809859-7809535 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 142, 40

Conread position: 43-370
Cow position: chrX:20652547-20652886 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 94, 209

Conread position: 44-283
Cow position: chrX:36376724-36376958 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 12

Conread position: 44-292
Cow position: chrX:8107906-8108157 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 99, 20

Conread position: 44-292
Cow position: chrX:21389714-21389973 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 13

Conread position: 44-294
Cow position: chrX:21415003-21415264 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 95, 21

Conread position: 44-308
Cow position: chrX:25451472-25451733 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 13

Conread position: 44-309
Cow position: chrX:13406151-13405878 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 87

Conread position: 44-309
Cow position: chrX:22819213-22819467 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 165, 138

Conread position: 44-309
Cow position: chrX:34221901-34222162 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 7

Conread position: 44-317
Cow position: chrX:23269065-23268792 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 50, 20

Conread position: 44-329
Cow position: chrX:14459032-14458732 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 44, 36

Conread position: 44-329
Cow position: chrX:18488579-18488279 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 44-329
Cow position: chrX:30836522-30836808 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 175

Conread position: 44-330
Cow position: chrX:15260484-15260183 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 130, 0

Conread position: 44-330
Cow position: chrX:19398913-19399214 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 130, 0

Conread position: 44-330
Cow position: chrX:30196433-30196733 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 132, 117

Conread position: 44-332
Cow position: chrX:20020714-20021015 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 130, 0

Conread position: 44-347
Cow position: chrX:12360023-12360341 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 130, 0

Conread position: 44-354
Cow position: chrX:18769057-18769370 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 12

Conread position: 44-365
Cow position: chrX:25738198-25738524 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 94, 23

Conread position: 44-373
Cow position: chrX:2559825-2559481 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 130, 333

Conread position: 44-373
Cow position: chrX:27977698-27977352 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 13

Conread position: 48-332
Cow position: chrX:30824786-30825086 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 48-347
Cow position: chrX:2649209-2648908 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 165, 65

Conread position: 48-354
Cow position: chrX:26531113-26531422 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 91, 17

Conread position: 48-362
Cow position: chrX:17265896-17265580 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 125, 109

Conread position: 48-365
Cow position: chrX:8807394-8807072 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 105, 9

Conread position: 49-357
Cow position: chrX:23038845-23038534 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 39, 30

Conread position: 50-309
Cow position: chrX:3649681-3649411 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 44

Conread position: 50-314
Cow position: chrX:3464935-3464659 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 28

Conread position: 50-329
Cow position: chrX:24413171-24413465 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 50-329
Cow position: chrX:28753196-28752905 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 94

Conread position: 50-329
Cow position: chrX:29908061-29907767 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 0

Conread position: 50-342
Cow position: chrX:25282354-25282045 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 0

Conread position: 51-294
Cow position: chrX:24826153-24826401 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 32

Conread position: 51-294
Cow position: chrX:40070469-40070213 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 35

Conread position: 51-308
Cow position: chrX:18898508-18898238 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 98

Conread position: 51-308
Cow position: chrX:41791574-41791301 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 51-309
Cow position: chrX:16035373-16035101 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 97

Conread position: 51-309
Cow position: chrX:22869961-22870231 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 100

Conread position: 51-309
Cow position: chrX:23572676-23572404 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 99

Conread position: 51-309
Cow position: chrX:28624619-28624349 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 97

Conread position: 51-312
Cow position: chrX:2479487-2479212 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 102

Conread position: 51-314
Cow position: chrX:7444047-7444324 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 51-314
Cow position: chrX:39701996-39702268 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 97

Conread position: 51-317
Cow position: chrX:19877959-19878236 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 134, 38

Conread position: 51-329
Cow position: chrX:5320575-5320284 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 28

Conread position: 51-329
Cow position: chrX:6870422-6870128 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 51-330
Cow position: chrX:6766593-6766314 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 88, 97

Conread position: 51-330
Cow position: chrX:9169473-9169178 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 51-330
Cow position: chrX:11855306-11855600 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 15, 280

Conread position: 51-330
Cow position: chrX:14597988-14598282 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 123, 0

Conread position: 51-330
Cow position: chrX:29912481-29912775 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 123, 0

Conread position: 51-330
Cow position: chrX:38140895-38140609 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 134, 274

Conread position: 51-332
Cow position: chrX:5354161-5353865 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 88, 97

Conread position: 51-332
Cow position: chrX:23317270-23316983 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 97

Conread position: 51-332
Cow position: chrX:24292522-24292241 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 63

Conread position: 51-332
Cow position: chrX:30228971-30228676 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 91, 97

Conread position: 51-332
Cow position: chrX:30688221-30688503 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 152

Conread position: 51-333
Cow position: chrX:28518578-28518281 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 97

Conread position: 51-342
Cow position: chrX:35937935-35937637 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 229

Conread position: 51-354
Cow position: chrX:5303611-5303300 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 137, 15

Conread position: 51-354
Cow position: chrX:18656663-18656342 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 88, 97

Conread position: 51-354
Cow position: chrX:35532996-35533314 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 239

Conread position: 51-354
Cow position: chrX:45236608-45236929 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 135, 0

Conread position: 51-357
Cow position: chrX:6659671-6659993 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 42

Conread position: 51-357
Cow position: chrX:16711097-16711418 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 98

Conread position: 51-357
Cow position: chrX:22871261-22871577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 147

Conread position: 51-357
Cow position: chrX:30455480-30455159 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 9, 98

Conread position: 51-357
Cow position: chrX:46929913-46929606 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 143, 23

Conread position: 51-358
Cow position: chrX:23697264-23696931 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 308

Conread position: 51-373
Cow position: chrX:8640930-8641267 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 88, 97

Conread position: 51-373
Cow position: chrX:12145240-12145581 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 51-373
Cow position: chrX:15113814-15114150 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 0

Conread position: 51-374
Cow position: chrX:20363003-20362670 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 9, 125

Conread position: 51-405
Cow position: chrX:17663774-17663410 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 133, 96

Conread position: 52-273
Cow position: chrX:13178465-13178231 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 52-309
Cow position: chrX:35847368-35847636 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 133, 252

Conread position: 52-361
Cow position: chrX:6044318-6044021 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 58

Conread position: 52-373
Cow position: chrX:6406495-6406825 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 217
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 16, 73

Conread position: 57-212
Cow position: chrX:26966599-26966749 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 9

Conread position: 57-255
Cow position: chrX:26340928-26340729 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 48

Conread position: 57-275
Cow position: chrX:29916197-29915968 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 91

Conread position: 57-280
Cow position: chrX:29880132-29879897 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 91

Conread position: 57-280
Cow position: chrX:37134485-37134254 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 91

Conread position: 57-283
Cow position: chrX:16808666-16808428 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 57-283
Cow position: chrX:29892235-29892472 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 91

Conread position: 57-286
Cow position: chrX:16325379-16325140 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 91

Conread position: 57-294
Cow position: chrX:28866864-28866621 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 91

Conread position: 57-300
Cow position: chrX:29700795-29700550 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 161, 76

Conread position: 57-303
Cow position: chrX:21063621-21063877 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 117, 55

Conread position: 57-306
Cow position: chrX:42222625-42222379 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 157

Conread position: 57-308
Cow position: chrX:27704747-27705009 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 127, 0

Conread position: 57-309
Cow position: chrX:1947799-1947547 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 26

Conread position: 57-309
Cow position: chrX:3406194-3405941 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chrX:5639778-5639525 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 138, 56

Conread position: 57-309
Cow position: chrX:6543412-6543677 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 137, 35

Conread position: 57-309
Cow position: chrX:8104133-8103886 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 130, 78

Conread position: 57-309
Cow position: chrX:16782428-16782692 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chrX:20953681-20953945 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chrX:22601262-22601003 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 117, 90

Conread position: 57-309
Cow position: chrX:23969502-23969763 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 37

Conread position: 57-309
Cow position: chrX:28633318-28633064 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 135, 68

Conread position: 57-309
Cow position: chrX:30165514-30165261 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 91

Conread position: 57-309
Cow position: chrX:30180776-30180515 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 67, 82

Conread position: 57-309
Cow position: chrX:30681356-30681092 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 91

Conread position: 57-309
Cow position: chrX:41734043-41733779 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 57-309
Cow position: chrX:44193292-44193028 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 73, 91

Conread position: 57-312
Cow position: chrX:28156680-28156950 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 113, 90

Conread position: 57-314
Cow position: chrX:2579567-2579836 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 57-314
Cow position: chrX:7096606-7096875 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 57-314
Cow position: chrX:9642284-9642015 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 57-314
Cow position: chrX:11744415-11744685 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 77, 91

Conread position: 57-314
Cow position: chrX:11976298-11976029 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 57-314
Cow position: chrX:13430641-13430378 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 187

Conread position: 57-314
Cow position: chrX:14125096-14124829 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 117, 85

Conread position: 57-314
Cow position: chrX:16040531-16040264 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 110, 0

Conread position: 57-314
Cow position: chrX:16278800-16279069 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 57-314
Cow position: chrX:23415547-23415278 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 138, 185

Conread position: 57-319
Cow position: chrX:29099565-29099838 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 91

Conread position: 57-320
Cow position: chrX:11950338-11950064 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 117, 190

Conread position: 57-324
Cow position: chrX:26508375-26508652 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 127, 107

Conread position: 57-328
Cow position: chrX:16359859-16359575 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 57-329
Cow position: chrX:671845-671568 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 156

Conread position: 57-329
Cow position: chrX:14462463-14462744 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 57

Conread position: 57-329
Cow position: chrX:21685767-21686054 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 57-329
Cow position: chrX:22077194-22076907 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 117, 0

Conread position: 57-329
Cow position: chrX:39713699-39713986 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 57-329
Cow position: chrX:40581015-40580728 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 57-330
Cow position: chrX:12465180-12465465 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 82, 91

Conread position: 57-330
Cow position: chrX:15621383-15621096 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 118, 45

Conread position: 57-330
Cow position: chrX:37080370-37080083 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 117, 89

Conread position: 57-330
Cow position: chrX:38330532-38330818 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 117, 35

Conread position: 57-330
Cow position: chrX:39548547-39548835 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 57-332
Cow position: chrX:865544-865834 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chrX:1056238-1055953 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 137

Conread position: 57-332
Cow position: chrX:3360969-3361259 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 57-332
Cow position: chrX:5248535-5248823 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 128, 75

Conread position: 57-332
Cow position: chrX:18244133-18244420 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chrX:23387390-23387100 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chrX:23395755-23396045 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chrX:24442091-24441801 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 91

Conread position: 57-332
Cow position: chrX:24588586-24588301 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 82, 23

Conread position: 57-332
Cow position: chrX:29842019-29841731 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 85

Conread position: 57-332
Cow position: chrX:30060035-30060326 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 93

Conread position: 57-332
Cow position: chrX:30159842-30159557 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 127, 78

Conread position: 57-332
Cow position: chrX:30172558-30172269 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 100

Conread position: 57-332
Cow position: chrX:31978693-31978403 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 117, 0

Conread position: 57-332
Cow position: chrX:35240020-35240304 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 128, 86

Conread position: 57-332
Cow position: chrX:41527366-41527070 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 0

Conread position: 57-334
Cow position: chrX:18455622-18455344 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 188, 173

Conread position: 57-342
Cow position: chrX:13800670-13800375 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 20

Conread position: 57-342
Cow position: chrX:29790669-29790373 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 23

Conread position: 57-344
Cow position: chrX:32584783-32584483 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 82, 91

Conread position: 57-347
Cow position: chrX:7572539-7572834 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 160, 67

Conread position: 57-348
Cow position: chrX:27629001-27629304 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 103, 0

Conread position: 57-354
Cow position: chrX:1550113-1550425 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 91

Conread position: 57-354
Cow position: chrX:2932570-2932257 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 40

Conread position: 57-354
Cow position: chrX:5124211-5123896 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 0

Conread position: 57-354
Cow position: chrX:17985457-17985155 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 145, 110

Conread position: 57-354
Cow position: chrX:31495884-31496199 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 57-356
Cow position: chrX:24280068-24280367 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:2300030-2300343 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 145, 90

Conread position: 57-357
Cow position: chrX:7551653-7551340 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:16702819-16703134 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:18193838-18194153 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 82, 90

Conread position: 57-357
Cow position: chrX:19657645-19657960 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 133, 0

Conread position: 57-357
Cow position: chrX:21226625-21226937 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:21582591-21582905 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:22579239-22578926 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 22

Conread position: 57-357
Cow position: chrX:23280172-23280470 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:24109456-24109144 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 136, 111

Conread position: 57-357
Cow position: chrX:27318379-27318694 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:30164090-30163775 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 91

Conread position: 57-357
Cow position: chrX:34442294-34441980 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 57-357
Cow position: chrX:41156459-41156774 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 82, 91

Conread position: 57-358
Cow position: chrX:10866721-10866403 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 82, 91

Conread position: 57-358
Cow position: chrX:16688416-16688732 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 82, 91

Conread position: 57-358
Cow position: chrX:25459491-25459175 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 57-361
Cow position: chrX:15151527-15151209 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 128, 188

Conread position: 57-362
Cow position: chrX:23515325-23514997 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 151

Conread position: 57-365
Cow position: chrX:39556648-39556324 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 226
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 31, 92

Conread position: 57-366
Cow position: chrX:31261485-31261164 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 206
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 79

Conread position: 57-371
Cow position: chrX:4482106-4482432 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 138, 76

Conread position: 57-371
Cow position: chrX:40365597-40365265 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 117, 0

Conread position: 57-373
Cow position: chrX:15140388-15140069 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 192

Conread position: 57-373
Cow position: chrX:24174805-24174476 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 296

Conread position: 57-373
Cow position: chrX:27095277-27095598 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 82, 91

Conread position: 57-373
Cow position: chrX:27615960-27616282 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 117, 74

Conread position: 57-373
Cow position: chrX:31201990-31202320 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 45

Conread position: 57-373
Cow position: chrX:37404086-37403757 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 57-373
Cow position: chrX:37852284-37852618 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 57-373
Cow position: chrX:41847382-41847055 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 90

Conread position: 58-362
Cow position: chrX:20503789-20504113 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 116, 319

Conread position: 58-365
Cow position: chrX:19556173-19556489 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 89

Conread position: 58-371
Cow position: chrX:9837280-9837597 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 21, 31

Conread position: 59-211
Cow position: chrX:48812538-48812691 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 61-309
Cow position: chrX:12178831-12179091 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 78, 87

Conread position: 62-330
Cow position: chrX:26974065-26974346 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 112, 5

Conread position: 63-314
Cow position: chrX:38395878-38396129 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 165
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 85

Conread position: 63-370
Cow position: chrX:336853-337174 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 130, 78

Conread position: 64-255
Cow position: chrX:40548735-40548932 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 13

Conread position: 64-292
Cow position: chrX:35024215-35024450 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 85

Conread position: 64-342
Cow position: chrX:32368560-32368844 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 12

Conread position: 64-350
Cow position: chrX:27408304-27408006 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 131, 48

Conread position: 64-367
Cow position: chrX:37795320-37795005 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 87

Conread position: 64-374
Cow position: chrX:29849474-29849153 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 121, 304

Conread position: 65-285
Cow position: chrX:11990994-11990763 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 77

Conread position: 65-314
Cow position: chrX:37832310-37832056 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 148, 85

Conread position: 65-318
Cow position: chrX:33803839-33803584 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 147, 169

Conread position: 65-331
Cow position: chrX:3211380-3211108 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 29, 12

Conread position: 65-332
Cow position: chrX:4905831-4905552 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 74, 36

Conread position: 65-332
Cow position: chrX:23452289-23452007 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 83

Conread position: 65-332
Cow position: chrX:38150844-38151126 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 74, 83

Conread position: 65-342
Cow position: chrX:23218229-23218510 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 126, 23

Conread position: 65-357
Cow position: chrX:7805537-7805839 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 120, 48

Conread position: 65-364
Cow position: chrX:18950580-18950263 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 83

Conread position: 65-365
Cow position: chrX:25198602-25198911 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 122, 58

Conread position: 65-373
Cow position: chrX:21254935-21255255 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 83

Conread position: 65-373
Cow position: chrX:29942313-29942629 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 15

Conread position: 65-374
Cow position: chrX:21592447-21592766 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 122, 235

Conread position: 65-377
Cow position: chrX:3121741-3121412 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 102

Conread position: 66-272
Cow position: chrX:33685288-33685506 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 66-273
Cow position: chrX:13536950-13537168 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 66-283
Cow position: chrX:8590739-8590968 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 66-292
Cow position: chrX:23032627-23032856 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 62, 129

Conread position: 66-292
Cow position: chrX:25146720-25146948 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 139, 20

Conread position: 66-312
Cow position: chrX:323071-323330 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 66-314
Cow position: chrX:5406217-5406477 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 66-314
Cow position: chrX:10059622-10059882 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 120, 237

Conread position: 66-314
Cow position: chrX:39293061-39292801 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 66-315
Cow position: chrX:39463890-39463622 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 47

Conread position: 66-316
Cow position: chrX:3596620-3596882 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 66-318
Cow position: chrX:15977796-15977532 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 66-327
Cow position: chrX:15091607-15091336 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 108, 65

Conread position: 66-329
Cow position: chrX:5646947-5646669 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 66-329
Cow position: chrX:6581092-6581369 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 108, 81

Conread position: 66-329
Cow position: chrX:9128213-9128491 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 66-329
Cow position: chrX:13206112-13206387 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 13

Conread position: 66-329
Cow position: chrX:22564528-22564252 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 14

Conread position: 66-329
Cow position: chrX:28503493-28503771 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 108, 0

Conread position: 66-329
Cow position: chrX:34253386-34253664 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 0

Conread position: 66-330
Cow position: chrX:5332276-5332001 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:5334658-5334383 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:6453854-6454132 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:14050037-14049758 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:19109884-19109605 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:22612560-22612821 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 248, 91

Conread position: 66-330
Cow position: chrX:24467967-24467689 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 82

Conread position: 66-330
Cow position: chrX:25289522-25289243 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:27758866-27759143 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 100, 45

Conread position: 66-330
Cow position: chrX:30053311-30053032 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 81

Conread position: 66-330
Cow position: chrX:30199835-30199556 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:33763501-33763780 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 120, 0

Conread position: 66-330
Cow position: chrX:34518883-34519162 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 66-330
Cow position: chrX:36479478-36479199 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 120, 0

Conread position: 66-331
Cow position: chrX:11566071-11566351 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 66-331
Cow position: chrX:38228160-38227875 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 66-331
Cow position: chrX:40788292-40788571 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 21

Conread position: 66-332
Cow position: chrX:2293443-2293162 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 120, 0

Conread position: 66-332
Cow position: chrX:2813325-2813044 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 66-332
Cow position: chrX:3096596-3096317 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 236

Conread position: 66-332
Cow position: chrX:5892385-5892666 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 120, 0

Conread position: 66-332
Cow position: chrX:6279446-6279168 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 80, 234

Conread position: 66-332
Cow position: chrX:7181620-7181898 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 57

Conread position: 66-332
Cow position: chrX:11409177-11408896 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 120, 0

Conread position: 66-332
Cow position: chrX:13031054-13030773 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 66-332
Cow position: chrX:14162350-14162630 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 10

Conread position: 66-332
Cow position: chrX:25015309-25015041 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 102, 42

Conread position: 66-332
Cow position: chrX:28313582-28313863 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 66-332
Cow position: chrX:28588128-28588409 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 66-332
Cow position: chrX:29225635-29225916 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 108, 0

Conread position: 66-332
Cow position: chrX:32643643-32643924 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 120, 0

Conread position: 66-332
Cow position: chrX:36729541-36729822 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 120, 0

Conread position: 66-332
Cow position: chrX:40516668-40516932 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 45

Conread position: 66-342
Cow position: chrX:20032674-20032383 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 108, 0

Conread position: 66-342
Cow position: chrX:30144127-30143836 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 72, 82

Conread position: 66-345
Cow position: chrX:33836660-33836944 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 88

Conread position: 66-348
Cow position: chrX:9438665-9438960 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 130, 45

Conread position: 66-354
Cow position: chrX:2103562-2103868 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 66-358
Cow position: chrX:508989-508689 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 148, 125

Conread position: 66-358
Cow position: chrX:21658701-21658998 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 87

Conread position: 66-358
Cow position: chrX:41106845-41106546 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 201

Conread position: 66-360
Cow position: chrX:6026541-6026240 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 126, 241

Conread position: 66-362
Cow position: chrX:4498790-4499102 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 182

Conread position: 66-365
Cow position: chrX:15306715-15306403 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 128

Conread position: 66-365
Cow position: chrX:19622470-19622770 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 67, 48

Conread position: 66-373
Cow position: chrX:3372695-3372374 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 108, 27

Conread position: 66-373
Cow position: chrX:4342908-4343228 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 120, 305

Conread position: 66-373
Cow position: chrX:24509024-24509346 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 120, 0

Conread position: 66-373
Cow position: chrX:39185330-39185652 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 0

Conread position: 66-373
Cow position: chrX:39730980-39730660 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 13

Conread position: 66-374
Cow position: chrX:165054-165356 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 52

Conread position: 66-374
Cow position: chrX:24923014-24923330 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 114

Conread position: 66-378
Cow position: chrX:24006672-24006345 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 298

Conread position: 66-383
Cow position: chrX:677942-677612 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 100, 30

Conread position: 66-383
Cow position: chrX:2248192-2247862 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 116, 40

Conread position: 66-383
Cow position: chrX:12102805-12102479 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 66

Conread position: 66-403
Cow position: chrX:22604280-22603932 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 225
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 45

Conread position: 67-312
Cow position: chrX:34237936-34238189 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 67-314
Cow position: chrX:2790395-2790654 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 67-329
Cow position: chrX:2486474-2486195 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 72, 81

Conread position: 67-330
Cow position: chrX:18222571-18222849 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 67-332
Cow position: chrX:24735110-24735382 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 78

Conread position: 67-332
Cow position: chrX:30817111-30816831 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 107, 0

Conread position: 67-348
Cow position: chrX:17610297-17610005 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 67-354
Cow position: chrX:11146174-11145874 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 107, 8

Conread position: 67-362
Cow position: chrX:4408716-4409026 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 106, 28

Conread position: 67-365
Cow position: chrX:19541190-19540864 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 47

Conread position: 67-373
Cow position: chrX:37905181-37905483 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 119, 172

Conread position: 67-386
Cow position: chrX:25847959-25848296 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 27, 91

Conread position: 68-292
Cow position: chrX:11461837-11461601 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 68-292
Cow position: chrX:21793749-21793986 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 68-306
Cow position: chrX:17902333-17902087 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 125

Conread position: 68-308
Cow position: chrX:27423124-27422873 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 68-309
Cow position: chrX:16525949-16526201 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 217

Conread position: 68-314
Cow position: chrX:14801660-14801401 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 89

Conread position: 68-314
Cow position: chrX:23986409-23986667 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 68-314
Cow position: chrX:45903336-45903594 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 68-315
Cow position: chrX:37815750-37816009 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 12

Conread position: 68-324
Cow position: chrX:13719162-13719434 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 222

Conread position: 68-329
Cow position: chrX:2048271-2048547 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 68-329
Cow position: chrX:2159924-2160200 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 68-329
Cow position: chrX:2274079-2274352 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 106, 179

Conread position: 68-329
Cow position: chrX:6372339-6372616 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 106, 0

Conread position: 68-329
Cow position: chrX:7755065-7755336 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 105, 30

Conread position: 68-329
Cow position: chrX:17994618-17994894 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 68-329
Cow position: chrX:39560500-39560217 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 68-330
Cow position: chrX:2500471-2500195 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 46

Conread position: 68-330
Cow position: chrX:3417977-3417701 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 106, 89

Conread position: 68-330
Cow position: chrX:5866305-5866582 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 68-330
Cow position: chrX:8529699-8529976 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 68-330
Cow position: chrX:16086964-16086687 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 68-330
Cow position: chrX:26760409-26760132 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 68-332
Cow position: chrX:4622794-4622516 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 145

Conread position: 68-332
Cow position: chrX:8435043-8434766 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 79

Conread position: 68-342
Cow position: chrX:3081972-3081683 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 68-342
Cow position: chrX:14782186-14781898 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 179

Conread position: 68-342
Cow position: chrX:20742151-20742435 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 106, 197

Conread position: 68-354
Cow position: chrX:16465460-16465763 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 106, 139

Conread position: 68-354
Cow position: chrX:24769697-24769397 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 106, 30

Conread position: 68-354
Cow position: chrX:27098838-27098548 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 33

Conread position: 68-354
Cow position: chrX:34761225-34761529 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 16, 11

Conread position: 68-354
Cow position: chrX:38231108-38230804 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 68-357
Cow position: chrX:30139625-30139321 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 68-358
Cow position: chrX:6089216-6088931 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 21

Conread position: 68-365
Cow position: chrX:26787324-26787623 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 122, 33

Conread position: 68-373
Cow position: chrX:22887819-22888137 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 204

Conread position: 68-373
Cow position: chrX:27305088-27305408 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 68-373
Cow position: chrX:36535572-36535256 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 106, 63

Conread position: 68-373
Cow position: chrX:40225081-40224766 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 78

Conread position: 68-379
Cow position: chrX:9011490-9011812 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 75

Conread position: 69-330
Cow position: chrX:36195252-36195528 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 0

Conread position: 69-332
Cow position: chrX:34719673-34719951 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 117, 0

Conread position: 69-373
Cow position: chrX:26275298-26275617 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 70-314
Cow position: chrX:24888972-24888722 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 119, 101

Conread position: 70-314
Cow position: chrX:27754589-27754846 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 69, 78

Conread position: 70-329
Cow position: chrX:29170181-29169906 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 71-314
Cow position: chrX:6673541-6673793 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 72-332
Cow position: chrX:21781555-21781825 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 75-309
Cow position: chrX:20878601-20878353 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 73

Conread position: 75-309
Cow position: chrX:27996817-27997063 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 75-315
Cow position: chrX:21728993-21728757 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 75-315
Cow position: chrX:37684345-37684099 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 18, 40

Conread position: 75-330
Cow position: chrX:13915517-13915760 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 76-292
Cow position: chrX:33965511-33965290 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 104

Conread position: 76-324
Cow position: chrX:37886167-37885910 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 98, 48

Conread position: 76-330
Cow position: chrX:362286-362017 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 76-342
Cow position: chrX:24309930-24309667 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 99, 6

Conread position: 76-348
Cow position: chrX:21318852-21319132 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 13

Conread position: 76-365
Cow position: chrX:1343098-1342797 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 119, 0

Conread position: 77-309
Cow position: chrX:35829598-35829354 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 117

Conread position: 77-309
Cow position: chrX:39387262-39387020 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 71

Conread position: 77-317
Cow position: chrX:2080397-2080633 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 120, 105

Conread position: 77-318
Cow position: chrX:24232049-24232299 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 48

Conread position: 77-331
Cow position: chrX:18987619-18987875 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 117, 98

Conread position: 77-338
Cow position: chrX:32182857-32182590 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 52

Conread position: 77-350
Cow position: chrX:39410264-39410003 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 239, 82

Conread position: 77-357
Cow position: chrX:12095421-12095122 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 110, 70

Conread position: 77-357
Cow position: chrX:37363891-37364185 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 71

Conread position: 77-358
Cow position: chrX:16410006-16410304 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 26

Conread position: 77-358
Cow position: chrX:40707642-40707932 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 16

Conread position: 77-365
Cow position: chrX:2607674-2607966 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 71, 178

Conread position: 77-366
Cow position: chrX:18247522-18247824 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 118, 48

Conread position: 77-366
Cow position: chrX:34008919-34009223 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 107, 171

Conread position: 77-371
Cow position: chrX:25359358-25359653 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 40

Conread position: 77-383
Cow position: chrX:5667869-5667561 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 70

Conread position: 78-309
Cow position: chrX:6194150-6193916 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 33

Conread position: 78-309
Cow position: chrX:23586974-23587211 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 148

Conread position: 78-338
Cow position: chrX:42042216-42041942 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 78-342
Cow position: chrX:21973106-21973388 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 229

Conread position: 78-350
Cow position: chrX:42539774-42540055 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 79-310
Cow position: chrX:24205200-24205434 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 68

Conread position: 79-314
Cow position: chrX:34034495-34034743 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 95, 35

Conread position: 79-331
Cow position: chrX:28327299-28327031 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 79-341
Cow position: chrX:37544154-37544426 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 126, 218

Conread position: 79-350
Cow position: chrX:22102593-22102318 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 32

Conread position: 79-365
Cow position: chrX:44018872-44019170 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 91, 85

Conread position: 80-309
Cow position: chrX:23314641-23314401 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 113, 32

Conread position: 80-309
Cow position: chrX:29722391-29722628 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 68

Conread position: 80-357
Cow position: chrX:34990234-34990524 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 81-292
Cow position: chrX:18288683-18288466 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 43

Conread position: 81-401
Cow position: chrX:25436734-25436427 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 235, 78

Conread position: 82-362
Cow position: chrX:46093646-46093358 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 30

Conread position: 83-314
Cow position: chrX:30086130-30085891 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 164

Conread position: 83-329
Cow position: chrX:5280680-5280418 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 74

Conread position: 83-329
Cow position: chrX:5289512-5289251 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 83-329
Cow position: chrX:17054743-17055004 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 83-342
Cow position: chrX:16061285-16061010 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 29

Conread position: 83-360
Cow position: chrX:15345053-15345333 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 47

Conread position: 86-309
Cow position: chrX:43789654-43789427 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 16

Conread position: 86-348
Cow position: chrX:5841467-5841748 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 87-310
Cow position: chrX:35609164-35609401 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 61

Conread position: 87-320
Cow position: chrX:11509014-11509261 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 87-332
Cow position: chrX:18451901-18451641 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 87-339
Cow position: chrX:3952032-3952297 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 87-357
Cow position: chrX:20800961-20801236 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 100, 130

Conread position: 87-358
Cow position: chrX:14268018-14267741 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 61

Conread position: 87-358
Cow position: chrX:37682132-37681847 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 64

Conread position: 87-374
Cow position: chrX:12033741-12033444 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 106, 66

Conread position: 87-384
Cow position: chrX:20974237-20974539 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 105, 8

Conread position: 88-309
Cow position: chrX:40268666-40268888 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 26

Conread position: 88-350
Cow position: chrX:30113236-30113506 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 75, 61

Conread position: 88-354
Cow position: chrX:29196933-29197201 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 59

Conread position: 88-365
Cow position: chrX:22330384-22330096 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 59

Conread position: 89-286
Cow position: chrX:4430489-4430675 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 89-306
Cow position: chrX:35408816-35409044 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 96, 33

Conread position: 89-309
Cow position: chrX:7177850-7178075 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 152

Conread position: 89-309
Cow position: chrX:7277123-7277346 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 89-309
Cow position: chrX:25839524-25839753 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 106

Conread position: 89-309
Cow position: chrX:28879415-28879194 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 117

Conread position: 89-309
Cow position: chrX:36250679-36250452 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 105

Conread position: 89-317
Cow position: chrX:39559183-39558945 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 46, 52

Conread position: 89-327
Cow position: chrX:21767984-21768237 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 89-331
Cow position: chrX:13885164-13885407 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 106, 16

Conread position: 89-332
Cow position: chrX:41879737-41879492 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 60

Conread position: 89-342
Cow position: chrX:32419363-32419613 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 39

Conread position: 89-358
Cow position: chrX:21500810-21501085 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 96, 15

Conread position: 89-362
Cow position: chrX:38569663-38569950 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 58

Conread position: 89-365
Cow position: chrX:21667118-21666840 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 25

Conread position: 89-365
Cow position: chrX:31728643-31728934 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 59

Conread position: 89-365
Cow position: chrX:37959795-37960074 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 125, 102

Conread position: 89-371
Cow position: chrX:23832249-23831963 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 103, 25

Conread position: 89-371
Cow position: chrX:29875809-29875524 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 33

Conread position: 89-372
Cow position: chrX:25280644-25280344 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 13

Conread position: 89-373
Cow position: chrX:16854206-16853911 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 59

Conread position: 89-374
Cow position: chrX:13524415-13524122 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 101, 37

Conread position: 89-412
Cow position: chrX:2763753-2764079 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 124, 6

Conread position: 90-332
Cow position: chrX:16517951-16517694 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 90-348
Cow position: chrX:19650320-19650058 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 99, 136

Conread position: 90-348
Cow position: chrX:30421961-30421694 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 120

Conread position: 90-348
Cow position: chrX:38793534-38793803 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 90-371
Cow position: chrX:16021195-16020905 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 123, 118

Conread position: 91-276
Cow position: chrX:37405094-37405288 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 99, 21

Conread position: 91-309
Cow position: chrX:37781886-37781665 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 203

Conread position: 91-312
Cow position: chrX:24225437-24225209 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 14

Conread position: 91-332
Cow position: chrX:32145081-32144830 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 57

Conread position: 91-339
Cow position: chrX:40278998-40279254 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 0

Conread position: 91-357
Cow position: chrX:10438744-10438475 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 175
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 117, 147

Conread position: 91-357
Cow position: chrX:40545440-40545159 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 57

Conread position: 91-360
Cow position: chrX:34078228-34078517 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 49

Conread position: 94-287
Cow position: chrX:40571738-40571538 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 89

Conread position: 95-332
Cow position: chrX:38007799-38007544 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 96-371
Cow position: chrX:40827552-40827267 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 87

Conread position: 99-330
Cow position: chrX:15346779-15346533 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 100-332
Cow position: chrX:28706293-28706540 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 101-295
Cow position: chrX:40478597-40478806 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 102-330
Cow position: chrX:19473966-19473724 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 50

Conread position: 102-354
Cow position: chrX:2794643-2794909 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 87, 66

Conread position: 102-354
Cow position: chrX:10931865-10932136 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 102-357
Cow position: chrX:23522300-23522035 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 87, 144

Conread position: 102-358
Cow position: chrX:6492928-6493196 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 46

Conread position: 102-379
Cow position: chrX:4177015-4177304 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 46

Conread position: 103-309
Cow position: chrX:27445871-27446087 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 145

Conread position: 104-344
Cow position: chrX:28079990-28080238 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 20

Conread position: 105-360
Cow position: chrX:2185444-2185706 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 23

Conread position: 107-304
Cow position: chrX:10976227-10976428 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 39

Conread position: 107-362
Cow position: chrX:67147-67416 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 264

Conread position: 111-363
Cow position: chrX:2146302-2146564 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 52

Conread position: 113-365
Cow position: chrX:303698-303962 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 242

Conread position: 113-365
Cow position: chrX:388713-388978 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 76, 243

Conread position: 115-314
Cow position: chrX:38999111-38999320 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 121-352
Cow position: chrX:40320854-40321097 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 125-307
Cow position: chrX:36023068-36023251 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 129

Conread position: 127-355
Cow position: chrX:42084245-42084491 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 129-365
Cow position: chrX:6836033-6835786 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 111

Conread position: 132-309
Cow position: chrX:3252435-3252258 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 72

Conread position: 132-309
Cow position: chrX:17794059-17794241 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 25

Conread position: 132-360
Cow position: chrX:2365887-2366132 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 149

Conread position: 135-329
Cow position: chrX:24321040-24320837 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 41

Conread position: 140-310
Cow position: chrX:10329056-10329224 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 143-330
Cow position: chrX:7119410-7119208 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 146-314
Cow position: chrX:31605111-31604931 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 146-332
Cow position: chrX:26617684-26617483 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 147-314
Cow position: chrX:1793927-1793751 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 147-314
Cow position: chrX:26844745-26844922 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 143

Conread position: 147-372
Cow position: chrX:5375602-5375836 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 167

Conread position: 149-332
Cow position: chrX:16345181-16345372 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 78

Conread position: 154-357
Cow position: chrX:3249491-3249280 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 39, 120

Conread position: 154-357
Cow position: chrX:22963567-22963348 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 154-362
Cow position: chrX:37955153-37955368 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 42

Conread position: 156-314
Cow position: chrX:486213-486378 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 89

Conread position: 157-360
Cow position: chrX:24020857-24020644 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 30

Conread position: 161-362
Cow position: chrX:27646672-27646878 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 20

Conread position: 162-358
Cow position: chrX:6645815-6646025 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 164-350
Cow position: chrX:11798739-11798929 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 164-350
Cow position: chrX:23237572-23237766 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 166-309
Cow position: chrX:12290000-12290150 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 176-329
Cow position: chrX:12457970-12458132 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 176-329
Cow position: chrX:18462703-18462540 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 13

Conread position: 176-330
Cow position: chrX:32330903-32331067 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 176-332
Cow position: chrX:10465057-10465223 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 176-332
Cow position: chrX:10923299-10923133 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 176-332
Cow position: chrX:38014366-38014532 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 176-332
Cow position: chrX:41886100-41886266 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 177-373
Cow position: chrX:20888332-20888130 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 184-372
Cow position: chrX:20976767-20976565 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 196-330
Cow position: chrX:32039546-32039406 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 200-342
Cow position: chrX:31778128-31777987 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 115, 8

Conread position: 200-373
Cow position: chrX:5566536-5566358 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 139

Conread position: 200-375
Cow position: chrX:2878440-2878264 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 116, 29

Conread position: 200-375
Cow position: chrX:20970222-20970395 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 115, 35

Conread position: 200-383
Cow position: chrX:16355058-16354873 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 163

Conread position: 201-357
Cow position: chrX:19636196-19636356 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 207-362
Cow position: chrX:21196332-21196489 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 152

Conread position: 207-365
Cow position: chrX:30430048-30429883 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 207-367
Cow position: chrX:17282997-17282843 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 208-342
Cow position: chrX:28766377-28766240 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 208-365
Cow position: chrX:19030742-19030903 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 211-347
Cow position: chrX:33669047-33669185 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 211-371
Cow position: chrX:4420528-4420690 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 60

Conread position: 212-373
Cow position: chrX:4630384-4630221 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 131

Conread position: 213-357
Cow position: chrX:11674373-11674519 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 94, 27

Conread position: 213-362
Cow position: chrX:18691833-18691681 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 214-366
Cow position: chrX:39236156-39236303 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 218-332
Cow position: chrX:9018982-9018865 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 219-330
Cow position: chrX:12001825-12001711 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 219-330
Cow position: chrX:18024362-18024476 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 219-332
Cow position: chrX:30965423-30965539 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 219-365
Cow position: chrX:25360884-25361037 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 219-373
Cow position: chrX:22812384-22812541 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 220-365
Cow position: chrX:33884472-33884620 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 220-366
Cow position: chrX:936402-936551 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 220-374
Cow position: chrX:3582507-3582664 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 89, 141

Conread position: 221-330
Cow position: chrX:5408379-5408491 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 221-332
Cow position: chrX:7486188-7486302 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 221-373
Cow position: chrX:16478239-16478394 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 224-348
Cow position: chrX:23193262-23193135 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 236-365
Cow position: chrX:6494989-6494858 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 127

Conread position: 251-374
Cow position: chrX:11846099-11846225 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Show alignments to all cow chromosomes.