Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8047O02.5 |
| Conread position: | 1-88 |
| Cow position: | chr11:12095799-12095712 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr11:15987261-15987174 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr11:31749628-31749715 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr11:35893895-35893982 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr11:41744565-41744478 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr11:44515942-44516029 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr11:63956267-63956180 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 77 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-88 |
| Cow position: | chr11:78792060-78792147 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-607 |
| Cow position: | chr11:36744795-36744256 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 79-607 |
| Cow position: | chr11:53288068-53287531 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 321 |
| Conread position: | 84-411 |
| Cow position: | chr11:9736559-9736225 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 84-607 |
| Cow position: | chr11:28230356-28229829 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 8 |
| Conread position: | 87-604 |
| Cow position: | chr11:36761491-36762005 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 340 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 89-607 |
| Cow position: | chr11:29669234-29668707 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 91-305 |
| Cow position: | chr11:40777335-40777114 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 91-348 |
| Cow position: | chr11:19220373-19220106 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 91-366 |
| Cow position: | chr11:11126320-11126592 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 91-489 |
| Cow position: | chr11:28050389-28049987 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 91-596 |
| Cow position: | chr11:42428733-42429246 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 164 |
| Conread position: | 91-605 |
| Cow position: | chr11:9659997-9659465 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 91-607 |
| Cow position: | chr11:1496668-1496150 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 122 |
| Conread position: | 91-607 |
| Cow position: | chr11:8887753-8887234 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 168 |
| Conread position: | 91-607 |
| Cow position: | chr11:21466475-21467001 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 311 |
| Conread position: | 91-607 |
| Cow position: | chr11:34020306-34020814 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 91-607 |
| Cow position: | chr11:85394412-85393887 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 305 |
| Conread position: | 91-608 |
| Cow position: | chr11:42361617-42362120 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 324 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 91-608 |
| Cow position: | chr11:50029298-50028761 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 344 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 9, 185 |
| Conread position: | 91-609 |
| Cow position: | chr11:8262302-8261777 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 91-613 |
| Cow position: | chr11:29234249-29233731 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 122 |
| Conread position: | 92-605 |
| Cow position: | chr11:12351658-12351143 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 36 |
| Conread position: | 92-607 |
| Cow position: | chr11:3492412-3492935 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 308 |
| Conread position: | 93-457 |
| Cow position: | chr11:32071515-32071876 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 158 |
| Conread position: | 93-536 |
| Cow position: | chr11:15998299-15998746 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 133 |
| Conread position: | 93-585 |
| Cow position: | chr11:10210565-10210060 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 93-607 |
| Cow position: | chr11:17220811-17220291 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 183 |
| Conread position: | 93-607 |
| Cow position: | chr11:30125841-30125339 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 94-360 |
| Cow position: | chr11:7687325-7687589 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 94-366 |
| Cow position: | chr11:31414835-31414562 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 94-563 |
| Cow position: | chr11:28073141-28073611 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 193, 90 |
| Conread position: | 94-564 |
| Cow position: | chr11:13581572-13581105 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 94-601 |
| Cow position: | chr11:63660182-63659663 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 94-602 |
| Cow position: | chr11:19064848-19064330 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 308 |
| Conread position: | 94-602 |
| Cow position: | chr11:87127241-87127757 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 123 |
| Conread position: | 94-604 |
| Cow position: | chr11:32272303-32271792 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 94-605 |
| Cow position: | chr11:33044714-33044200 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 94-607 |
| Cow position: | chr11:4041659-4041152 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 94-607 |
| Cow position: | chr11:17108284-17107762 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 307 |
| Conread position: | 94-607 |
| Cow position: | chr11:20921344-20920821 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 94-607 |
| Cow position: | chr11:32450269-32450791 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 309 |
| Conread position: | 94-607 |
| Cow position: | chr11:37477715-37477195 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 94-607 |
| Cow position: | chr11:57628645-57628122 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 308 |
| Conread position: | 94-607 |
| Cow position: | chr11:67847165-67846647 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 95-546 |
| Cow position: | chr11:44496183-44495732 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 95-564 |
| Cow position: | chr11:38836014-38835540 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 67 |
| Conread position: | 95-580 |
| Cow position: | chr11:58133774-58134265 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 95-607 |
| Cow position: | chr11:11987522-11988031 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 235 |
| Conread position: | 95-607 |
| Cow position: | chr11:12359019-12358501 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 302 |
| Conread position: | 95-607 |
| Cow position: | chr11:19103083-19102562 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 126 |
| Conread position: | 95-607 |
| Cow position: | chr11:23876707-23877226 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 95-607 |
| Cow position: | chr11:24392729-24393241 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 95-607 |
| Cow position: | chr11:25526983-25527482 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 95-607 |
| Cow position: | chr11:26125525-26125007 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 95 |
| Conread position: | 95-607 |
| Cow position: | chr11:28055191-28054676 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 95-607 |
| Cow position: | chr11:37093659-37093137 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 306 |
| Conread position: | 95-607 |
| Cow position: | chr11:41171290-41170768 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 306 |
| Conread position: | 95-607 |
| Cow position: | chr11:54209030-54209536 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 95-607 |
| Cow position: | chr11:71329045-71329568 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 95-607 |
| Cow position: | chr11:77729123-77728596 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 297 |
| Conread position: | 96-369 |
| Cow position: | chr11:76375065-76374798 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 96-606 |
| Cow position: | chr11:43515229-43514707 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 220 |
| Conread position: | 96-607 |
| Cow position: | chr11:10846845-10847366 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 303 |
| Conread position: | 96-607 |
| Cow position: | chr11:72110559-72110041 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 303 |
| Conread position: | 96-608 |
| Cow position: | chr11:28063094-28063601 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 276 |
| Conread position: | 97-602 |
| Cow position: | chr11:37492239-37491727 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 97-605 |
| Cow position: | chr11:43731827-43732326 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 97-606 |
| Cow position: | chr11:44861120-44860606 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 300 |
| Conread position: | 97-607 |
| Cow position: | chr11:9158016-9157509 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 98-316 |
| Cow position: | chr11:8896047-8896266 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 99-605 |
| Cow position: | chr11:67449908-67450420 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 34 |
| Conread position: | 99-607 |
| Cow position: | chr11:4028141-4027639 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 99-607 |
| Cow position: | chr11:75919827-75920326 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 101-607 |
| Cow position: | chr11:15983039-15983548 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 103-498 |
| Cow position: | chr11:62216661-62216288 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 146, 81 |
| Conread position: | 104-355 |
| Cow position: | chr11:17280823-17280578 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 190, 88 |
| Conread position: | 111-514 |
| Cow position: | chr11:44895598-44895190 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 111-607 |
| Cow position: | chr11:52418810-52419312 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 112-401 |
| Cow position: | chr11:3240041-3240324 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 112-413 |
| Cow position: | chr11:77235181-77235495 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 288 |
| Conread position: | 116-584 |
| Cow position: | chr11:14730095-14729626 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 28, 237 |
| Conread position: | 130-563 |
| Cow position: | chr11:44157793-44157357 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 57 |
| Conread position: | 130-600 |
| Cow position: | chr11:30304689-30305148 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 130-604 |
| Cow position: | chr11:44230572-44231037 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 65 |
| Conread position: | 130-608 |
| Cow position: | chr11:7113041-7113519 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 95 |
| Conread position: | 136-598 |
| Cow position: | chr11:4271421-4270956 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 52 |
| Conread position: | 138-494 |
| Cow position: | chr11:49040187-49039836 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 138-608 |
| Cow position: | chr11:9607127-9606653 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 198 |
| Conread position: | 144-583 |
| Cow position: | chr11:39833208-39833654 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 159-596 |
| Cow position: | chr11:26566247-26565808 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 108, 112 |
| Conread position: | 159-607 |
| Cow position: | chr11:61401568-61401127 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 29 |
| Conread position: | 181-607 |
| Cow position: | chr11:45110851-45111293 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 214 |
| Conread position: | 184-503 |
| Cow position: | chr11:10218066-10217748 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 188-607 |
| Cow position: | chr11:8244204-8244628 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 206 |
| Conread position: | 197-592 |
| Cow position: | chr11:81853113-81852723 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 198-607 |
| Cow position: | chr11:8282586-8282999 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 52 |
| Conread position: | 210-564 |
| Cow position: | chr11:10049644-10050001 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 48 |
| Conread position: | 215-523 |
| Cow position: | chr11:24242998-24243296 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 218-486 |
| Cow position: | chr11:17924915-17924639 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 75, 159 |
| Conread position: | 218-608 |
| Cow position: | chr11:67867775-67867388 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 127 |
| Conread position: | 223-533 |
| Cow position: | chr11:13067478-13067172 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 162 |
| Conread position: | 223-533 |
| Cow position: | chr11:13162526-13162832 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 162 |
| Conread position: | 226-607 |
| Cow position: | chr11:10089871-10090260 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 171 |
| Conread position: | 250-594 |
| Cow position: | chr11:66726025-66726375 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 258-413 |
| Cow position: | chr11:46962849-46962692 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 110 |
| Conread position: | 264-607 |
| Cow position: | chr11:37065550-37065197 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 270-607 |
| Cow position: | chr11:5343638-5343293 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 130 |
| Conread position: | 278-578 |
| Cow position: | chr11:65161971-65161663 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 282-546 |
| Cow position: | chr11:30186893-30187159 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 166, 121 |
| Conread position: | 285-551 |
| Cow position: | chr11:32684885-32685152 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 173, 107 |
| Conread position: | 292-607 |
| Cow position: | chr11:64045601-64045922 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 326-607 |
| Cow position: | chr11:40776900-40776618 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 345-607 |
| Cow position: | chr11:73476970-73477232 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 47 |
| Conread position: | 353-588 |
| Cow position: | chr11:3240318-3240550 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 106, 129 |
| Conread position: | 357-585 |
| Cow position: | chr11:31414248-31414024 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 358-605 |
| Cow position: | chr11:52886824-52886581 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 360-533 |
| Cow position: | chr11:7688288-7688460 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 364-499 |
| Cow position: | chr11:59370669-59370534 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 393-607 |
| Cow position: | chr11:17280585-17280374 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 176 |
| Conread position: | 394-607 |
| Cow position: | chr11:8519703-8519916 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 146 |
| Conread position: | 405-607 |
| Cow position: | chr11:9734926-9734724 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 53, 142 |
| Conread position: | 409-607 |
| Cow position: | chr11:38505878-38505681 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 451-585 |
| Cow position: | chr11:4065467-4065331 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 459-607 |
| Cow position: | chr11:12093333-12093481 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 459-607 |
| Cow position: | chr11:33194777-33194629 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 461-606 |
| Cow position: | chr11:77235493-77235638 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 468-608 |
| Cow position: | chr11:9220335-9220195 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-608 |
| Cow position: | chr11:7316669-7316795 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 484-602 |
| Cow position: | chr11:31925969-31926090 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 512-607 |
| Cow position: | chr11:76374371-76374277 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.