Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-89
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               83-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 47
               

               Conread position:
               84-605
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 5
               

               Conread position:
               85-495
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               298
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               86-595
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 12
               

               Conread position:
               87-607
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 17
               

               Conread position:
               91-267
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 99
               

               Conread position:
               91-305
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               91-605
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               338
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 306
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               93-546
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               93-585
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               327
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               49, 11
               

               Conread position:
               94-334
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               94-564
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               94-570
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               94-605
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 15
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 85
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 10
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 309
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 309
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               95-344
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               36, 179
               

               Conread position:
               95-594
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 150
               

               Conread position:
               95-605
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               95-605
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 304
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 93
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               95-608
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 489
               

               Conread position:
               96-421
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 144
               

               Conread position:
               96-591
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 178
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 300
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 89
               

               Conread position:
               98-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 13
               

               Conread position:
               100-451
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               104-348
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 64
               

               Conread position:
               104-456
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 298
               

               Conread position:
               104-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               109-607
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 14
               

               Conread position:
               111-404
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               18, 247
               

               Conread position:
               111-499
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               111-598
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 104
               

               Conread position:
               111-605
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 283
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               112-551
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 83
               

               Conread position:
               115-605
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               163-522
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 48
               

               Conread position:
               168-607
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 232
               

               Conread position:
               180-637
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               185-597
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 28
               

               Conread position:
               190-524
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               192-605
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               193-608
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 187
               

               Conread position:
               202-607
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               264
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               88, 169
               

               Conread position:
               206-607
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               241-466
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 107
               

               Conread position:
               262-601
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               263-607
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 135
               

               Conread position:
               290-607
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               329-607
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               359-592
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               367-607
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               372-529
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               389-599
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               69, 48
               

               Conread position:
               404-596
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 165
               

               Conread position:
               441-596
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               446-607
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               450-607
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               483-607
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 92
               
Show alignments to all cow chromosomes.