Cow genome map

Conread name: Ss1.1-Pig4-TMW8047O02.5

Conread position: 1-85
Cow position:
Alignm length: 85
Alignm identity: 75
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 77
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-88
Cow position:
Alignm length: 88
Alignm identity: 76
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 77-607
Cow position:
Alignm length: 547
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 15

Conread position: 84-607
Cow position:
Alignm length: 535
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 8

Conread position: 84-607
Cow position:
Alignm length: 536
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 84-607
Cow position:
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 85-608
Cow position:
Alignm length: 533
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 91-534
Cow position:
Alignm length: 454
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 91-602
Cow position:
Alignm length: 519
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 8

Conread position: 91-607
Cow position:
Alignm length: 527
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 310

Conread position: 91-607
Cow position:
Alignm length: 527
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 179

Conread position: 91-607
Cow position:
Alignm length: 531
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 313

Conread position: 91-607
Cow position:
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 39

Conread position: 91-607
Cow position:
Alignm length: 530
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 312

Conread position: 92-500
Cow position:
Alignm length: 427
Alignm identity: 285
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 45, 23

Conread position: 92-585
Cow position:
Alignm length: 498
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 98

Conread position: 92-605
Cow position:
Alignm length: 522
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 106

Conread position: 92-605
Cow position:
Alignm length: 534
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 92-607
Cow position:
Alignm length: 532
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 92-607
Cow position:
Alignm length: 529
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 143

Conread position: 93-289
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 9

Conread position: 93-503
Cow position:
Alignm length: 417
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 179

Conread position: 93-503
Cow position:
Alignm length: 424
Alignm identity: 285
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 9

Conread position: 94-473
Cow position:
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 110

Conread position: 94-589
Cow position:
Alignm length: 506
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 21

Conread position: 94-598
Cow position:
Alignm length: 515
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 94-601
Cow position:
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 114

Conread position: 94-605
Cow position:
Alignm length: 518
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 92

Conread position: 94-605
Cow position:
Alignm length: 532
Alignm identity: 353
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 24

Conread position: 94-605
Cow position:
Alignm length: 523
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 102

Conread position: 94-607
Cow position:
Alignm length: 525
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 309

Conread position: 94-607
Cow position:
Alignm length: 528
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 103

Conread position: 94-607
Cow position:
Alignm length: 525
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 94-607
Cow position:
Alignm length: 519
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 131

Conread position: 94-607
Cow position:
Alignm length: 523
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 94-607
Cow position:
Alignm length: 525
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 308

Conread position: 95-595
Cow position:
Alignm length: 514
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 95-602
Cow position:
Alignm length: 521
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 95-607
Cow position:
Alignm length: 525
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 91

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 173

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 126

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 95

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 306

Conread position: 95-607
Cow position:
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 80

Conread position: 95-607
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 305

Conread position: 95-607
Cow position:
Alignm length: 525
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 180

Conread position: 96-440
Cow position:
Alignm length: 350
Alignm identity: 244
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 8

Conread position: 96-607
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 306

Conread position: 96-608
Cow position:
Alignm length: 519
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 67

Conread position: 97-584
Cow position:
Alignm length: 501
Alignm identity: 335
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 64

Conread position: 97-601
Cow position:
Alignm length: 513
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 258

Conread position: 97-605
Cow position:
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 97-607
Cow position:
Alignm length: 521
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 135

Conread position: 97-607
Cow position:
Alignm length: 520
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 303

Conread position: 97-607
Cow position:
Alignm length: 521
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 93

Conread position: 98-285
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 13

Conread position: 98-607
Cow position:
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 99-607
Cow position:
Alignm length: 521
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 176

Conread position: 99-607
Cow position:
Alignm length: 519
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 302

Conread position: 99-607
Cow position:
Alignm length: 516
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 101-605
Cow position:
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 104-592
Cow position:
Alignm length: 496
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 212

Conread position: 104-605
Cow position:
Alignm length: 514
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 298

Conread position: 111-602
Cow position:
Alignm length: 511
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 111-607
Cow position:
Alignm length: 506
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 109

Conread position: 112-283
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 110

Conread position: 114-607
Cow position:
Alignm length: 504
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 115-477
Cow position:
Alignm length: 367
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 75

Conread position: 115-584
Cow position:
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 312

Conread position: 129-368
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 172

Conread position: 130-437
Cow position:
Alignm length: 316
Alignm identity: 222
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 163, 29

Conread position: 131-593
Cow position:
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 135-413
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 158, 178

Conread position: 136-607
Cow position:
Alignm length: 479
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 262

Conread position: 136-607
Cow position:
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 54

Conread position: 142-302
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 41

Conread position: 145-605
Cow position:
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 28

Conread position: 151-581
Cow position:
Alignm length: 445
Alignm identity: 297
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 24

Conread position: 156-607
Cow position:
Alignm length: 457
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 159-606
Cow position:
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 108

Conread position: 168-604
Cow position:
Alignm length: 441
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 33

Conread position: 168-607
Cow position:
Alignm length: 449
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 232

Conread position: 180-607
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 136

Conread position: 181-607
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 212

Conread position: 184-608
Cow position:
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 213

Conread position: 185-579
Cow position:
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 185-607
Cow position:
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 86

Conread position: 187-608
Cow position:
Alignm length: 428
Alignm identity: 279
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 109

Conread position: 190-601
Cow position:
Alignm length: 423
Alignm identity: 271
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 31, 92

Conread position: 193-364
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 133

Conread position: 199-601
Cow position:
Alignm length: 404
Alignm identity: 263
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 262, 76

Conread position: 207-503
Cow position:
Alignm length: 307
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 29

Conread position: 220-593
Cow position:
Alignm length: 381
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 144, 172

Conread position: 224-431
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 168

Conread position: 231-607
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 235-605
Cow position:
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 165

Conread position: 255-607
Cow position:
Alignm length: 363
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 11

Conread position: 266-607
Cow position:
Alignm length: 343
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 192, 100

Conread position: 276-605
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 117

Conread position: 277-519
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 123

Conread position: 291-607
Cow position:
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 278

Conread position: 294-605
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 25

Conread position: 294-607
Cow position:
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 31

Conread position: 326-606
Cow position:
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 25

Conread position: 327-607
Cow position:
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 9

Conread position: 329-599
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 331-607
Cow position:
Alignm length: 278
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 59

Conread position: 343-607
Cow position:
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 50

Conread position: 353-605
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 84, 32

Conread position: 358-605
Cow position:
Alignm length: 249
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 34

Conread position: 383-551
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 387-590
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 72, 36

Conread position: 411-607
Cow position:
Alignm length: 198
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 21

Conread position: 432-601
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 27, 52

Conread position: 452-602
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 461-607
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 471-607
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 485-602
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.