Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-89
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-102
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-491
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               84-605
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 8
               

               Conread position:
               88-477
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               90-463
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               91-349
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               91-463
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 238
               

               Conread position:
               91-605
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 120
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 57
               

               Conread position:
               92-520
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               92-584
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               92-605
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 196
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 97
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               93-366
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 194
               

               Conread position:
               93-366
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 75
               

               Conread position:
               93-592
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               93-607
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 325
               

               Conread position:
               94-422
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               94-533
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               94-585
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               94-597
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 162
               

               Conread position:
               95-279
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               32, 160
               

               Conread position:
               95-556
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 207
               

               Conread position:
               95-605
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 125
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 79
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 240
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 304
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               95-608
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               96-384
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               96-510
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               96-599
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 303
               

               Conread position:
               96-605
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 309
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 302
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 173
               

               Conread position:
               97-380
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               97-448
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 84
               

               Conread position:
               97-605
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 294
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 32
               

               Conread position:
               99-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               100-452
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 19
               

               Conread position:
               100-608
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               101-497
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               104-464
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               104-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 74
               

               Conread position:
               110-582
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 82
               

               Conread position:
               111-337
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 285
               

               Conread position:
               115-415
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               115-489
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 200
               

               Conread position:
               130-607
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 270
               

               Conread position:
               136-607
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 165
               

               Conread position:
               138-607
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               140-285
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               144-597
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 161
               

               Conread position:
               144-607
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 15
               

               Conread position:
               164-607
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 29
               

               Conread position:
               173-584
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 15
               

               Conread position:
               181-607
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 160
               

               Conread position:
               187-554
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 45
               

               Conread position:
               187-595
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 219
               

               Conread position:
               192-607
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 207
               

               Conread position:
               195-509
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               95, 218
               

               Conread position:
               198-608
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 52
               

               Conread position:
               209-607
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 190
               

               Conread position:
               210-397
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 185
               

               Conread position:
               210-607
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               218-454
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 126
               

               Conread position:
               218-602
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               257-601
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               36, 142
               

               Conread position:
               275-465
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 125
               

               Conread position:
               286-584
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               238, 33
               

               Conread position:
               334-589
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               336-608
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 56
               

               Conread position:
               345-607
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 46
               

               Conread position:
               345-607
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               354-605
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               387-605
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               389-607
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               403-607
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 96
               

               Conread position:
               418-607
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               421-607
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 32
               

               Conread position:
               468-607
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 38
               
Show alignments to all cow chromosomes.