Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-89
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               77
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               73-607
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 19
               

               Conread position:
               79-534
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 151
               

               Conread position:
               81-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 97
               

               Conread position:
               84-605
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               84-607
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               85-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               87-607
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 123
               

               Conread position:
               90-424
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               91-345
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               91-605
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 231
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 311
               

               Conread position:
               92-602
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 69
               

               Conread position:
               92-605
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 314
               

               Conread position:
               92-608
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 193
               

               Conread position:
               93-583
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               93-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               94-393
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               94-570
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 302
               

               Conread position:
               94-585
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               94-586
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 224
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 308
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 308
               

               Conread position:
               95-404
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               95-488
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 91
               

               Conread position:
               95-584
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               95-585
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 293
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               96-549
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               96-606
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               96-607
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 130
               

               Conread position:
               97-451
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               100-384
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               138, 167
               

               Conread position:
               100-607
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               100-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 298
               

               Conread position:
               104-419
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 69
               

               Conread position:
               108-607
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 144
               

               Conread position:
               108-607
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 292
               

               Conread position:
               111-605
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 49
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 290
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 79
               

               Conread position:
               112-607
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               116-602
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               333
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               130-607
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 270
               

               Conread position:
               130-608
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               136-607
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 191
               

               Conread position:
               138-592
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               299
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               119, 67
               

               Conread position:
               142-514
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               181-599
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 107
               

               Conread position:
               184-607
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 215
               

               Conread position:
               192-602
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 116
               

               Conread position:
               192-603
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               220-517
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               236, 91
               

               Conread position:
               229-457
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               247-607
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 156
               

               Conread position:
               255-607
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 146
               

               Conread position:
               342-607
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               116, 48
               

               Conread position:
               357-560
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               382-607
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               405-607
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               429-606
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               456-607
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               479-607
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               483-607
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               483-607
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               486-607
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               50, 68
               

               Conread position:
               490-607
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               493-607
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               520-607
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.