Cow genome map
Conread name: | Ss1.1-Pig4-TMW8047O02.5 |
Conread position: | 1-88 |
Cow position: | chr17:2264363-2264276 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr17:3742334-3742247 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr17:36284209-36284122 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr17:39050615-39050528 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-89 |
Cow position: | chr17:23721450-23721362 (view UCSC Genome Browser custom track) |
Alignm length: | 89 |
Alignm identity: | 77 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 73-607 |
Cow position: | chr17:44853366-44852834 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 19 |
Conread position: | 79-534 |
Cow position: | chr17:22160476-22160941 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 323 |
Conread position: | 79-607 |
Cow position: | chr17:1383251-1382716 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 111 |
Conread position: | 79-607 |
Cow position: | chr17:6089601-6089063 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 323 |
Conread position: | 79-607 |
Cow position: | chr17:24633517-24634052 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 151 |
Conread position: | 81-607 |
Cow position: | chr17:2587897-2588401 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 97 |
Conread position: | 84-605 |
Cow position: | chr17:15157393-15156868 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 5 |
Conread position: | 84-607 |
Cow position: | chr17:2261676-2262204 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 5 |
Conread position: | 85-607 |
Cow position: | chr17:8208677-8209204 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 87-607 |
Cow position: | chr17:23857467-23856936 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 123 |
Conread position: | 90-424 |
Cow position: | chr17:28109658-28110001 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 70 |
Conread position: | 91-345 |
Cow position: | chr17:2737949-2738208 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 185 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 91-605 |
Cow position: | chr17:6002440-6001922 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 74 |
Conread position: | 91-607 |
Cow position: | chr17:2286947-2287484 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 231 |
Conread position: | 91-607 |
Cow position: | chr17:22429911-22429396 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 311 |
Conread position: | 92-602 |
Cow position: | chr17:15370649-15371143 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 69 |
Conread position: | 92-605 |
Cow position: | chr17:15435361-15435887 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 314 |
Conread position: | 92-608 |
Cow position: | chr17:15849971-15850496 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 193 |
Conread position: | 93-583 |
Cow position: | chr17:42264101-42264578 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 93 |
Conread position: | 93-607 |
Cow position: | chr17:2146786-2147269 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 17 |
Conread position: | 94-393 |
Cow position: | chr17:11782946-11783247 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 183 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 37, 224 |
Conread position: | 94-570 |
Cow position: | chr17:24780623-24781109 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 302 |
Conread position: | 94-585 |
Cow position: | chr17:16859982-16859485 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 69 |
Conread position: | 94-586 |
Cow position: | chr17:39933266-39933732 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 94-607 |
Cow position: | chr17:228725-228210 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 17 |
Conread position: | 94-607 |
Cow position: | chr17:2249006-2248486 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 224 |
Conread position: | 94-607 |
Cow position: | chr17:4081230-4081726 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 17 |
Conread position: | 94-607 |
Cow position: | chr17:9653874-9653358 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 92 |
Conread position: | 94-607 |
Cow position: | chr17:14217449-14216925 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 308 |
Conread position: | 94-607 |
Cow position: | chr17:14893739-14894251 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 21 |
Conread position: | 94-607 |
Cow position: | chr17:20401258-20401759 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 16 |
Conread position: | 94-607 |
Cow position: | chr17:20666151-20665628 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 308 |
Conread position: | 95-404 |
Cow position: | chr17:2579137-2579447 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 218 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 19, 9 |
Conread position: | 95-488 |
Cow position: | chr17:15322407-15322788 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 91 |
Conread position: | 95-584 |
Cow position: | chr17:14325917-14325432 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 9 |
Conread position: | 95-585 |
Cow position: | chr17:18104104-18103604 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 293 |
Conread position: | 95-602 |
Cow position: | chr17:4059683-4060192 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 9 |
Conread position: | 95-602 |
Cow position: | chr17:43988112-43988626 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 95 |
Conread position: | 95-607 |
Cow position: | chr17:13857197-13856671 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 9 |
Conread position: | 95-607 |
Cow position: | chr17:13929244-13929766 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 67 |
Conread position: | 95-607 |
Cow position: | chr17:19269788-19269268 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 101 |
Conread position: | 96-549 |
Cow position: | chr17:14308728-14308273 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 64 |
Conread position: | 96-606 |
Cow position: | chr17:25737237-25737760 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 90 |
Conread position: | 96-607 |
Cow position: | chr17:1879665-1880192 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 130 |
Conread position: | 97-451 |
Cow position: | chr17:1284179-1283847 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 97 |
Conread position: | 97-607 |
Cow position: | chr17:4294955-4295442 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 86 |
Conread position: | 100-384 |
Cow position: | chr17:40803982-40804268 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 200 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 138, 167 |
Conread position: | 100-607 |
Cow position: | chr17:249505-250037 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 11 |
Conread position: | 100-607 |
Cow position: | chr17:2173458-2173976 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 298 |
Conread position: | 104-419 |
Cow position: | chr17:13893947-13893626 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 215 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 25, 69 |
Conread position: | 108-607 |
Cow position: | chr17:23324852-23324356 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 144 |
Conread position: | 108-607 |
Cow position: | chr17:35591804-35592312 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 292 |
Conread position: | 111-605 |
Cow position: | chr17:16889719-16890220 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 49 |
Conread position: | 111-607 |
Cow position: | chr17:152872-152378 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 37 |
Conread position: | 111-607 |
Cow position: | chr17:3643244-3642738 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 290 |
Conread position: | 111-607 |
Cow position: | chr17:11088129-11087626 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 79 |
Conread position: | 112-607 |
Cow position: | chr17:27345401-27345896 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 39 |
Conread position: | 116-602 |
Cow position: | chr17:1658960-1658473 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 333 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 21, 71 |
Conread position: | 130-607 |
Cow position: | chr17:1946589-1947067 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 270 |
Conread position: | 130-608 |
Cow position: | chr17:20183612-20183132 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 60 |
Conread position: | 136-607 |
Cow position: | chr17:18185905-18185437 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 191 |
Conread position: | 138-592 |
Cow position: | chr17:4286717-4287164 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 299 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 119, 67 |
Conread position: | 142-514 |
Cow position: | chr17:4671820-4672196 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 267 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 46, 55 |
Conread position: | 181-599 |
Cow position: | chr17:22131898-22132318 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 107 |
Conread position: | 184-607 |
Cow position: | chr17:6259512-6259942 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 215 |
Conread position: | 192-602 |
Cow position: | chr17:20088055-20087651 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 116 |
Conread position: | 192-603 |
Cow position: | chr17:15143694-15143273 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 209 |
Conread position: | 220-517 |
Cow position: | chr17:15381697-15381988 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 194 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 236, 91 |
Conread position: | 229-457 |
Cow position: | chr17:18192926-18193145 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 247-607 |
Cow position: | chr17:18027027-18026659 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 156 |
Conread position: | 255-607 |
Cow position: | chr17:2555861-2556220 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 146 |
Conread position: | 342-607 |
Cow position: | chr17:2579459-2579713 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 186 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 116, 48 |
Conread position: | 357-560 |
Cow position: | chr17:31199795-31199599 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 162 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 15, 35 |
Conread position: | 382-607 |
Cow position: | chr17:40804689-40804914 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 10 |
Conread position: | 405-607 |
Cow position: | chr17:181258-181461 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 161 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 429-606 |
Cow position: | chr17:26205888-26205710 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 136 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 456-607 |
Cow position: | chr17:1283758-1283607 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 122 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 479-607 |
Cow position: | chr17:15323216-15323343 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 483-607 |
Cow position: | chr17:31768065-31767941 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 102 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 483-607 |
Cow position: | chr17:43952588-43952465 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 486-607 |
Cow position: | chr17:22557599-22557720 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 50, 68 |
Conread position: | 490-607 |
Cow position: | chr17:34156109-34156226 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 493-607 |
Cow position: | chr17:36987687-36987573 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 99 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 520-607 |
Cow position: | chr17:602694-602781 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.