Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8047O02.5
        

               Conread position:
               1-86
               

               Cow position:
               
               

               Alignm length:
               86
               

               Alignm identity:
               76
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-88
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               76
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-496
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               77-607
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 76
               

               Conread position:
               79-312
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 249
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 323
               

               Conread position:
               79-607
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 185
               

               Conread position:
               83-607
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 315
               

               Conread position:
               84-366
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               84-604
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 247
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               91-607
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 171
               

               Conread position:
               92-578
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               92-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               93-366
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               38, 97
               

               Conread position:
               93-607
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 90
               

               Conread position:
               94-312
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               94-457
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 304
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 307
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 21
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 307
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 307
               

               Conread position:
               95-351
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               95-526
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               95-588
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               95-596
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               95-602
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 216
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 93
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 306
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               95-607
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 278
               

               Conread position:
               97-327
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               34, 162
               

               Conread position:
               97-468
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 108
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 128
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 91
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 294
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 95
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 304
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 480
               

               Conread position:
               97-607
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 137
               

               Conread position:
               97-608
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 177
               

               Conread position:
               99-607
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               104-551
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               111-605
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 218
               

               Conread position:
               111-605
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               111-607
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               115-605
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               115-605
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 31
               

               Conread position:
               117-317
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               130-605
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 60
               

               Conread position:
               131-384
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               227, 0
               

               Conread position:
               160-345
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               162-316
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               162-607
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 81
               

               Conread position:
               168-607
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 233
               

               Conread position:
               178-605
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 223
               

               Conread position:
               181-495
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               181-607
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 183
               

               Conread position:
               192-598
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 86
               

               Conread position:
               217-608
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               238-607
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               94, 56
               

               Conread position:
               250-607
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               266-607
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               289-606
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               316-570
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               329-585
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 69
               

               Conread position:
               345-607
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 47
               

               Conread position:
               353-605
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               358-581
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               358-607
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               360-568
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 72
               

               Conread position:
               369-602
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               387-681
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 203
               

               Conread position:
               427-608
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               459-601
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               459-605
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               493-607
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.