Cow genome map
Conread name: | Ss1.1-Pig4-TMW8047O02.5 |
Conread position: | 1-86 |
Cow position: | chr18:37701099-37701184 (view UCSC Genome Browser custom track) |
Alignm length: | 86 |
Alignm identity: | 76 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr18:1956779-1956866 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr18:3755334-3755247 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 77 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr18:9722999-9722912 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr18:25941293-25941206 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr18:26244185-26244272 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr18:28767192-28767105 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-88 |
Cow position: | chr18:30762568-30762655 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 76 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 74-496 |
Cow position: | chr18:29900091-29900500 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 265 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 58 |
Conread position: | 77-607 |
Cow position: | chr18:51689394-51689930 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 76 |
Conread position: | 79-312 |
Cow position: | chr18:37585895-37585659 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 173 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 52, 173 |
Conread position: | 79-607 |
Cow position: | chr18:16078471-16079023 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 249 |
Conread position: | 79-607 |
Cow position: | chr18:22602255-22602793 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 323 |
Conread position: | 79-607 |
Cow position: | chr18:33953799-33953269 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 185 |
Conread position: | 83-607 |
Cow position: | chr18:41841056-41840519 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 315 |
Conread position: | 84-366 |
Cow position: | chr18:51660191-51660476 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 203 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 50, 5 |
Conread position: | 84-604 |
Cow position: | chr18:16393868-16393344 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 247 |
Conread position: | 91-607 |
Cow position: | chr18:33335650-33336168 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 100 |
Conread position: | 91-607 |
Cow position: | chr18:51257761-51258289 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 171 |
Conread position: | 92-578 |
Cow position: | chr18:16863862-16864338 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 314 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 5, 18 |
Conread position: | 92-607 |
Cow position: | chr18:1520916-1521451 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 17 |
Conread position: | 92-607 |
Cow position: | chr18:2019902-2019379 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 94 |
Conread position: | 92-607 |
Cow position: | chr18:35335271-35335785 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 10 |
Conread position: | 93-366 |
Cow position: | chr18:45958476-45958742 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 195 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 38, 97 |
Conread position: | 93-607 |
Cow position: | chr18:16533765-16534284 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 90 |
Conread position: | 94-312 |
Cow position: | chr18:51464688-51464472 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 160 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 37, 96 |
Conread position: | 94-457 |
Cow position: | chr18:44621540-44621914 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 304 |
Conread position: | 94-607 |
Cow position: | chr18:19352168-19352691 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 307 |
Conread position: | 94-607 |
Cow position: | chr18:47719779-47719278 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 21 |
Conread position: | 94-607 |
Cow position: | chr18:47741801-47742324 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 307 |
Conread position: | 94-607 |
Cow position: | chr18:55089142-55088619 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 307 |
Conread position: | 95-351 |
Cow position: | chr18:32651780-32652039 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 181 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 36, 126 |
Conread position: | 95-526 |
Cow position: | chr18:16660220-16659793 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 9 |
Conread position: | 95-588 |
Cow position: | chr18:54024571-54024074 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 95-596 |
Cow position: | chr18:16176822-16176319 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 9 |
Conread position: | 95-602 |
Cow position: | chr18:40478167-40478683 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 306 |
Conread position: | 95-607 |
Cow position: | chr18:14415763-14416281 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 95 |
Conread position: | 95-607 |
Cow position: | chr18:27838519-27838011 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 216 |
Conread position: | 95-607 |
Cow position: | chr18:28974114-28973597 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 384 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 93 |
Conread position: | 95-607 |
Cow position: | chr18:36508117-36508638 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 306 |
Conread position: | 95-607 |
Cow position: | chr18:51480624-51481145 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 67 |
Conread position: | 95-607 |
Cow position: | chr18:54172059-54171558 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 278 |
Conread position: | 97-327 |
Cow position: | chr18:19540089-19539855 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 174 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 34, 162 |
Conread position: | 97-468 |
Cow position: | chr18:17992775-17992398 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 85 |
Conread position: | 97-607 |
Cow position: | chr18:9186976-9186468 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 108 |
Conread position: | 97-607 |
Cow position: | chr18:11275314-11274800 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 128 |
Conread position: | 97-607 |
Cow position: | chr18:33358654-33359171 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 91 |
Conread position: | 97-607 |
Cow position: | chr18:37599742-37599236 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 294 |
Conread position: | 97-607 |
Cow position: | chr18:39748368-39748884 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 95 |
Conread position: | 97-607 |
Cow position: | chr18:43147139-43146620 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 304 |
Conread position: | 97-607 |
Cow position: | chr18:48221664-48222184 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 480 |
Conread position: | 97-607 |
Cow position: | chr18:51310368-51310891 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 137 |
Conread position: | 97-608 |
Cow position: | chr18:32293561-32294070 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 177 |
Conread position: | 99-607 |
Cow position: | chr18:6869468-6868953 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 88 |
Conread position: | 104-551 |
Cow position: | chr18:43200858-43201304 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 87 |
Conread position: | 111-605 |
Cow position: | chr18:33268641-33269129 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 218 |
Conread position: | 111-605 |
Cow position: | chr18:37504865-37505367 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 51 |
Conread position: | 111-607 |
Cow position: | chr18:23797451-23797953 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 109 |
Conread position: | 111-607 |
Cow position: | chr18:23944571-23944069 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 51 |
Conread position: | 115-605 |
Cow position: | chr18:16877290-16877772 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 82 |
Conread position: | 115-605 |
Cow position: | chr18:44601347-44601823 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 31 |
Conread position: | 117-317 |
Cow position: | chr18:54269276-54269476 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 16, 77 |
Conread position: | 130-605 |
Cow position: | chr18:53785662-53786143 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 60 |
Conread position: | 131-384 |
Cow position: | chr18:29763279-29763539 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 148 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 227, 0 |
Conread position: | 160-345 |
Cow position: | chr18:22869605-22869793 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 162-316 |
Cow position: | chr18:40345470-40345315 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 116 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 162-607 |
Cow position: | chr18:29236671-29237114 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 81 |
Conread position: | 168-607 |
Cow position: | chr18:2887164-2886716 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 233 |
Conread position: | 178-605 |
Cow position: | chr18:51341554-51341990 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 223 |
Conread position: | 181-495 |
Cow position: | chr18:35288402-35288729 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 238 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 9, 79 |
Conread position: | 181-607 |
Cow position: | chr18:54044829-54044417 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 183 |
Conread position: | 192-598 |
Cow position: | chr18:20832726-20833134 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 251 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 68, 86 |
Conread position: | 217-608 |
Cow position: | chr18:51237430-51237817 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 249 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 77, 99 |
Conread position: | 238-607 |
Cow position: | chr18:5980371-5980735 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 249 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 94, 56 |
Conread position: | 250-607 |
Cow position: | chr18:14130330-14130690 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 144 |
Conread position: | 266-607 |
Cow position: | chr18:52650888-52651225 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 50 |
Conread position: | 289-606 |
Cow position: | chr18:114376-114694 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 51 |
Conread position: | 316-570 |
Cow position: | chr18:25350673-25350934 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 192 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 50, 82 |
Conread position: | 329-585 |
Cow position: | chr18:19539558-19539296 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 69 |
Conread position: | 345-607 |
Cow position: | chr18:24040689-24040427 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 47 |
Conread position: | 353-605 |
Cow position: | chr18:36211067-36210815 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 176 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 18, 41 |
Conread position: | 358-581 |
Cow position: | chr18:32652277-32652499 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 32 |
Conread position: | 358-607 |
Cow position: | chr18:51463018-51462773 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 33 |
Conread position: | 360-568 |
Cow position: | chr18:54269642-54269860 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 163 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 25, 72 |
Conread position: | 369-602 |
Cow position: | chr18:16843268-16843038 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 22 |
Conread position: | 387-681 |
Cow position: | chr18:18089388-18089107 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 203 |
Conread position: | 427-608 |
Cow position: | chr18:27987185-27987367 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 144 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 459-601 |
Cow position: | chr18:17992263-17992121 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 119 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 459-605 |
Cow position: | chr18:45958876-45959020 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 116 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 493-607 |
Cow position: | chr18:56462711-56462597 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.